project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP005279 SRS152391 SRX037913 SRR091652 13258156 13258156 1 FALSE FALSE 12089615 217613070 bone other 2011-01-12T12:06:05.847 2011-12-21T09:09:34.843 2014-02-24T17:54:26.826 18 GSM652276 SRR091652.bw DGE_dic9-20_1 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: dic(9;20)", "tissue: Bone marrow") SRP005279 SRS152392 SRX037914 SRR091653 25024122 25024122 1 FALSE FALSE 23096746 392644682 bone other 2011-01-12T12:06:05.863 2011-12-21T09:09:34.843 2014-02-24T17:54:26.864 17 GSM652277 SRR091653.bw DGE_dic9-20_2 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: dic(9;20)", "tissue: Bone marrow") SRP005279 SRS152393 SRX037915 SRR091654 14043109 14043109 1 FALSE FALSE 12812661 230627898 bone other 2011-01-12T12:06:05.877 2011-12-21T09:09:34.843 2014-02-24T17:54:26.896 18 GSM652278 SRR091654.bw DGE_dic9-20_3 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: dic(9;20)", "tissue: Bone marrow") SRP005279 SRS152394 SRX037916 SRR091655 7704096 7704096 1 FALSE FALSE 5636096 101449728 bone other 2011-01-12T12:06:05.890 2011-12-21T09:09:34.843 2014-02-24T17:54:26.929 18 GSM652279 SRR091655.bw DGE_HeH_1 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: High Hyperploidy (HeH)", "tissue: Bone marrow") SRP005279 SRS152395 SRX037917 SRR091656 23384359 23384359 1 FALSE FALSE 22221078 377758326 bone other 2011-01-12T12:06:05.903 2011-12-21T09:09:34.843 2014-02-24T17:54:26.963 17 GSM652280 SRR091656.bw DGE_HeH_2a c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: High Hyperploidy (HeH)", "tissue: Bone marrow") SRP005279 SRS152396 SRX037918 SRR091657 15834772 15834772 1 FALSE FALSE 14873631 267725358 bone other 2011-01-12T12:06:05.920 2011-12-21T09:09:34.843 2014-02-24T17:54:26.995 18 GSM652281 SRR091657.bw DGE_HeH_2b c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: High Hyperploidy (HeH)", "tissue: Bone marrow") SRP005279 SRS152397 SRX037919 SRR091658 9828954 9828954 1 FALSE FALSE 8982620 161687160 bone other 2011-01-12T12:06:05.933 2011-12-21T09:09:34.843 2014-02-24T17:54:27.028 18 GSM652282 SRR091658.bw DGE_HeH_3 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: High Hyperploidy (HeH)", "tissue: Bone marrow") SRP005279 SRS152398 SRX037920 SRR091659 11209206 11209206 1 FALSE FALSE 10455140 188192520 bone other 2011-01-12T12:06:05.947 2011-12-21T09:09:34.843 2014-02-24T17:54:27.060 18 GSM652283 SRR091659.bw DGE_HeH_4 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: High Hyperploidy (HeH)", "tissue: Bone marrow") SRP005279 SRS152399 SRX037921 SRR091660 9473568 9473568 1 FALSE FALSE 9021622 162389196 bone other 2011-01-12T12:06:05.963 2011-12-21T09:09:34.843 2014-02-24T17:54:27.093 18 GSM652284 SRR091660.bw DGE_HeH_5 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: High Hyperploidy (HeH)", "tissue: Bone marrow") SRP005279 SRS152400 SRX037922 SRR091661 12501029 12501029 1 FALSE FALSE 11333018 203994323 bone other 2011-01-12T12:06:05.977 2011-12-21T09:09:34.843 2014-02-24T17:54:27.126 18 GSM652285 SRR091661.bw DGE_HeH_6 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: High Hyperploidy (HeH)", "tissue: Bone marrow") SRP005279 SRS152401 SRX037923 SRR091662 14365064 14365064 1 FALSE FALSE 13680395 246247110 bone other 2011-01-12T12:06:05.993 2011-12-21T09:09:34.843 2014-02-24T17:54:27.158 18 GSM652286 SRR091662.bw DGE_HeH_7 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: High Hyperploidy (HeH)", "tissue: Bone marrow") SRP005279 SRS152402 SRX037924 SRR091663 6296178 6296178 1 FALSE FALSE 5506595 99118692 bone other 2011-01-12T12:06:06.007 2011-12-21T09:09:34.843 2014-02-24T17:54:27.189 18 GSM652287 SRR091663.bw DGE_HeH_8 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: High Hyperploidy (HeH)", "tissue: Bone marrow") SRP005279 SRS152403 SRX037925 SRR091664 15940244 15940244 1 FALSE FALSE 13916284 250493112 bone other 2011-01-12T12:06:06.020 2011-12-21T09:09:34.843 2014-02-24T17:54:27.220 18 GSM652288 SRR091664.bw DGE_t12-21_1 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: t(12;21) ETV6-RUNX1", "tissue: Bone marrow") SRP005279 SRS152404 SRX037926 SRR091665 23410345 23410345 1 FALSE FALSE 22502384 382540528 bone other 2011-01-12T12:06:06.037 2011-12-21T09:09:34.843 2014-02-24T17:54:27.260 17 GSM652289 SRR091665.bw DGE_t12-21_2 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: t(12;21) ETV6-RUNX1", "tissue: Bone marrow") SRP005279 SRS152405 SRX037927 SRR091666 12640677 12640677 1 FALSE FALSE 11825428 212857704 bone other 2011-01-12T12:06:06.050 2011-12-21T09:09:34.843 2014-02-24T17:54:27.293 18 GSM652290 SRR091666.bw DGE_t12-21_3 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: t(12;21) ETV6-RUNX1", "tissue: Bone marrow") SRP005279 SRS152406 SRX037928 SRR091667 16137850 16137850 1 FALSE FALSE 15208302 273749436 bone other 2011-01-12T12:06:06.063 2011-12-21T09:09:34.843 2014-02-24T17:54:27.325 18 GSM652291 SRR091667.bw DGE_t9-22_1 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: t(9;22) BCR-ABL1", "tissue: Bone marrow") SRP005279 SRS152407 SRX037929 SRR091668 20375873 20375873 1 FALSE FALSE 19365869 329219773 bone other 2011-01-12T12:06:06.080 2011-12-21T09:09:34.843 2014-02-24T17:54:27.357 17 GSM652292 SRR091668.bw DGE_t9-22_2 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: t(9;22) BCR-ABL1", "tissue: Bone marrow") SRP005279 SRS152408 SRX037930 SRR091669 11196511 11196511 1 FALSE FALSE 10390000 187019999 bone other 2011-01-12T12:06:06.093 2011-12-21T09:09:34.843 2014-02-24T17:54:27.393 18 GSM652293 SRR091669.bw DGE_t9-22_3 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: B-cell precursor (BCP) ALL", "bcp all subtype: t(9;22) BCR-ABL1", "tissue: Bone marrow") SRP005279 SRS152409 SRX037931 SRR091670 10198022 10198022 1 FALSE FALSE 9346697 168240546 bone other 2011-01-12T12:06:06.107 2011-12-21T09:09:34.843 2014-02-24T17:54:27.433 18 GSM652294 SRR091670.bw DGE_TALL_1 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: T-cell lineage ALL (T-ALL)", "tissue: Bone marrow") SRP005279 SRS152410 SRX037932 SRR091671 10676183 10676183 1 FALSE FALSE 10104693 181884474 bone other 2011-01-12T12:06:06.120 2011-12-21T09:09:34.843 2014-02-24T17:54:27.465 18 GSM652295 SRR091671.bw DGE_TALL_2 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: T-cell lineage ALL (T-ALL)", "tissue: Bone marrow") SRP005279 SRS152411 SRX037933 SRR091672 14433257 14433257 1 FALSE FALSE 13606066 231303122 bone other 2011-01-12T12:06:06.133 2011-12-21T09:09:34.843 2014-02-24T17:54:27.499 17 GSM652296 SRR091672.bw DGE_TALL_3 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: T-cell lineage ALL (T-ALL)", "tissue: Bone marrow") SRP005279 SRS152412 SRX037934 SRR091673 13355599 13355599 1 FALSE FALSE 12504597 225082746 blood other 2011-01-12T12:06:06.147 2011-12-21T09:09:34.843 2014-02-24T17:54:27.530 18 GSM652297 SRR091673.bw DGE_TALL_4 c("disease state: acute lymphoblastic leukemia (ALL)", "all lineage: T-cell lineage ALL (T-ALL)", "tissue: Peripheral blood") SRP005279 SRS377784 SRX207879 SRR627491 16900115 16900115 1 FALSE FALSE 15211557 258596469 tonsil other 2012-11-30T09:07:45.490 2013-01-14T15:05:14.660 2014-03-06T16:46:06.525 17 GSM1046908 SRR627491.bw CD19_196 c("cell type: Fractionated CD19+ B-cells", "disease state: healthy donor") SRP005279 SRS377786 SRX207881 SRR627493 23121830 23121830 1 FALSE FALSE 21536800 366125600 tonsil other 2012-11-30T09:07:45.947 2013-01-14T15:05:15.227 2014-03-06T22:15:13.803 17 GSM1046910 SRR627493.bw CD19_465 c("cell type: Fractionated CD19+ B-cells", "disease state: healthy donor") SRP005279 SRS377787 SRX207882 SRR627494 17202905 17202905 1 FALSE FALSE 16060975 273036575 tonsil other 2012-11-30T09:07:45.983 2013-01-14T15:05:15.303 2014-03-06T16:46:06.674 17 GSM1046911 SRR627494.bw CD19_573 c("cell type: Fractionated CD19+ B-cells", "disease state: healthy donor") SRP005279 SRS377788 SRX207883 SRR627495 15090363 15090363 1 FALSE FALSE 13797847 234563399 blood other 2012-11-30T09:07:46.020 2013-01-14T15:05:15.350 2014-03-06T16:46:06.767 17 GSM1046912 SRR627495.bw CD3_539 c("cell type: Fractionated CD3+ T-cells", "disease state: healthy donor") SRP005279 SRS377789 SRX207884 SRR627496 19012292 19012292 1 FALSE FALSE 17890293 304134981 blood other 2012-11-30T09:07:46.063 2013-01-14T15:05:15.387 2014-03-06T16:46:06.863 17 GSM1046913 SRR627496.bw CD3_546 c("cell type: Fractionated CD3+ T-cells", "disease state: healthy donor") SRP005279 SRS377790 SRX207885 SRR627497 20128908 20128908 1 FALSE FALSE 18999853 322997501 blood other 2012-11-30T09:07:46.100 2013-01-14T15:05:15.420 2014-03-06T16:46:06.968 17 GSM1046914 SRR627497.bw CD3_547 c("cell type: Fractionated CD3+ T-cells", "disease state: healthy donor") SRP005279 SRS377791 SRX207886 SRR627498 21540565 21540565 1 FALSE FALSE 20195566 343324622 blood other 2012-11-30T09:07:46.130 2013-01-14T15:05:15.467 2014-03-06T16:46:07.027 17 GSM1046915 SRR627498.bw CD3_549 c("cell type: Fractionated CD3+ T-cells", "disease state: healthy donor") SRP005279 SRS377792 SRX207887 SRR627499 3268333 3268333 1 FALSE FALSE 2754194 49575492 bone other 2012-11-30T09:07:46.180 2013-01-14T15:05:15.497 2014-03-06T16:46:07.069 18 GSM1046916 SRR627499.bw DGE_HeH_9 c("cell type: leukemic cells", "cytogenetic background: High Hyperploidy", "disease state: acute lymphoblastic leukemia (ALL)", "all lineage: BCP ALL") SRP005279 SRS377793 SRX207888 SRR627500 5100052 5100052 1 FALSE FALSE 4803956 86471208 bone other 2012-11-30T09:07:46.313 2013-01-14T15:05:15.530 2014-03-06T16:46:07.107 18 GSM1046917 SRR627500.bw DGE_undefined_1 c("cell type: leukemic cells", "cytogenetic background: undefined", "disease state: acute lymphoblastic leukemia (ALL)", "all lineage: BCP ALL") SRP005279 SRS377794 SRX207889 SRR627501 7640471 7640471 1 FALSE FALSE 7036985 126665730 bone other 2012-11-30T09:07:46.370 2013-01-14T15:05:15.577 2014-03-06T16:46:07.141 18 GSM1046918 SRR627501.bw DGE_t1-19_1 c("cell type: leukemic cells", "cytogenetic background: t(1;19)TCF3-PBX1", "disease state: acute lymphoblastic leukemia (ALL)", "all lineage: BCP ALL") SRP005279 SRS377795 SRX207890 SRR627502 7397632 7397632 1 FALSE FALSE 6478172 116607096 bone other 2012-11-30T09:07:46.440 2013-01-14T15:05:15.610 2014-03-06T16:46:07.187 18 GSM1046919 SRR627502.bw DGE_MLL-11q23_1 c("cell type: leukemic cells", "cytogenetic background: MLL/11q23", "disease state: acute lymphoblastic leukemia (ALL)", "all lineage: BCP ALL") SRP005279 SRS377796 SRX207891 SRR627503 1427968 1427968 1 FALSE FALSE 1070150 19262700 bone other 2012-11-30T09:07:46.493 2013-01-14T15:05:15.647 2014-03-06T16:46:07.222 18 GSM1046920 SRR627503.bw DGE_t12-21_4 c("cell type: leukemic cells", "cytogenetic background: t(12;21) ETV6-RUNX1", "disease state: acute lymphoblastic leukemia (ALL)", "all lineage: BCP ALL") SRP005279 SRS377797 SRX207892 SRR627504 3743607 3743607 1 FALSE FALSE 3219433 57949794 bone other 2012-11-30T09:07:46.580 2013-01-14T15:05:15.760 2014-03-06T16:46:07.255 18 GSM1046921 SRR627504.bw DGE_HeH_10 c("cell type: leukemic cells", "cytogenetic background: High Hyperploidy", "disease state: acute lymphoblastic leukemia (ALL)", "all lineage: BCP ALL") SRP005279 SRS377785 SRX207880 SRR627492 14711494 0 0 FALSE FALSE 0 NA tonsil other 2012-11-30T09:07:45.917 2013-01-14T15:05:15.150 2014-03-06T16:46:06.568 17 GSM1046909 NA CD19_377 c("cell type: Fractionated CD19+ B-cells", "disease state: healthy donor")