project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP006309 SRS184259 SRX055349 SRR172836 27795171 27795171 1 FALSE FALSE 25236083 902937380 colon hct 2011-04-06T10:35:06.730 2012-05-25T09:05:08.970 2014-02-24T17:56:08.909 36 GSM699730 SRR172836.bw RNA-Seq_HCT116-WT_no-treatment c("genotype/variation: Wild type", "cell line: HCT116", "stimulation: none", "alignment program: Bowtie") SRP006309 SRS184260 SRX055350 SRR172837 28709979 28709979 1 FALSE FALSE 26619922 952728950 colon hct 2011-04-06T10:35:06.777 2012-05-25T09:05:09.023 2014-02-24T17:56:08.948 36 GSM699731 SRR172837.bw RNA-Seq_HCT116-WT_TNFa-treatment c("genotype/variation: Wild type", "cell line: HCT116", "stimulation: TNF-alpha", "alignment program: Bowtie") SRP006309 SRS184261 SRX055351 SRR172838 26582512 26582512 1 FALSE FALSE 24904577 891616947 colon hct 2011-04-06T10:35:06.830 2012-05-25T09:05:09.077 2014-02-24T17:56:08.982 36 GSM699732 SRR172838.bw RNA-Seq_HCT116-KD_no-treatment c("genotype/variation: HP1 gamma knock down", "cell line: HCT116", "stimulation: none", "alignment program: Bowtie") SRP006309 SRS184262 SRX055352 SRR172839 25691769 25691769 1 FALSE FALSE 24158691 865106720 colon hct 2011-04-06T10:35:06.863 2012-05-25T09:05:09.133 2014-02-24T17:56:09.022 36 GSM699733 SRR172839.bw RNA-Seq_HCT116-KD_TNFa-treatment c("genotype/variation: HP1 gamma knock down", "cell line: HCT116", "stimulation: TNF-alpha", "alignment program: Bowtie") SRP006309 SRS301906 SRX130491 SRR446726 16422842 16422842 1 FALSE FALSE 11679314 344398536 colon hct 2012-03-21T09:31:06.960 2012-05-25T09:05:11.010 2014-03-06T14:50:23.956 30 GSM898220 SRR446726.bw RNA-Seq_HCT116-WT_no-treatment_rep2 c("celll line: HCT116", "genotype/variation: Wild type", "stimulation: none", "chip antibody: none", "data processing (alignment) algorithm: Bowtie") SRP006309 SRS301907 SRX130492 SRR446727 18775450 18775450 1 FALSE FALSE 15919258 472077628 colon hct 2012-03-21T09:31:06.973 2012-05-25T09:05:11.160 2014-03-06T14:50:23.997 30 GSM898221 SRR446727.bw RNA-Seq_HCT116-WT_TNF-treatment_rep2 c("celll line: HCT116", "genotype/variation: Wild type", "stimulation: TNF", "chip antibody: none", "data processing (alignment) algorithm: Bowtie") SRP006309 SRS301908 SRX130493 SRR446728 18432025 18432025 1 FALSE FALSE 15106351 446684141 colon hct 2012-03-21T09:31:06.990 2012-05-25T09:05:11.210 2014-03-06T14:50:24.036 30 GSM898222 SRR446728.bw RNA-Seq_HCT116-KD_no-treatment_rep2 c("celll line: HCT116", "genotype/variation: HP1 gamma knock down", "stimulation: none", "chip antibody: none", "data processing (alignment) algorithm: Bowtie") SRP006309 SRS301909 SRX130494 SRR446729 18257507 18257507 1 FALSE FALSE 15016902 444727069 colon hct 2012-03-21T09:31:07.007 2012-05-25T09:05:11.263 2014-03-06T14:50:24.071 30 GSM898223 SRR446729.bw RNA-Seq_HCT116-KD_TNF-treatment_rep2 c("celll line: HCT116", "genotype/variation: HP1 gamma knock down", "stimulation: TNF", "chip antibody: none", "data processing (alignment) algorithm: Bowtie")