project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP006575 SRS190698 SRX059633 SRR191639 13657574 13657574 1 FALSE FALSE 7480239 260981033 breast ra 2011-04-29T15:45:08.503 2012-08-27T10:05:04.180 2014-02-24T17:56:30.349 36 GSM715426 SRR191639.bw STT5463_Breast c("tissue: breast invasive ductal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190699 SRX059634 SRR191640 18811311 18811311 1 FALSE FALSE 14068755 488952841 breast ra 2011-04-29T15:45:08.517 2012-08-27T10:05:06.950 2014-02-24T17:56:30.380 36 GSM715427 SRR191640.bw STT5474_Breast c("tissue: breast invasive ductal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190700 SRX059635 SRR191641 14303386 14303386 1 FALSE FALSE 8836090 297937709 breast ra 2011-04-29T15:45:08.530 2012-08-27T10:05:06.997 2014-02-24T17:56:30.419 36 GSM715428 SRR191641.bw STT5477_Breast c("tissue: breast invasive ductal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190701 SRX059636 SRR191642 18645172 18645172 1 FALSE FALSE 14985841 498462481 breast ra 2011-04-29T15:45:08.540 2012-08-27T10:05:07.070 2014-02-24T17:56:30.450 36 GSM715429 SRR191642.bw STT5572_Breast c("tissue: breast invasive ductal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190702 SRX059637 SRR191643 16973021 16973021 1 FALSE FALSE 13555525 449907586 breast ra 2011-04-29T15:45:08.557 2012-08-27T10:05:07.137 2014-02-24T17:56:30.486 36 GSM715430 SRR191643.bw STT5575_Breast c("tissue: breast invasive ductal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190703 SRX059638 SRR191644 30632063 30632063 1 FALSE FALSE 24296889 831382197 breast ra 2011-04-29T15:45:08.570 2012-08-27T10:05:07.200 2014-02-24T17:56:30.524 36 GSM715431 SRR191644.bw STT5581_Breast c("tissue: breast invasive ductal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190704 SRX059639 SRR191645 11717847 11717847 1 FALSE FALSE 8327102 276944876 lung ra 2011-04-29T15:45:08.583 2012-08-27T10:05:07.250 2014-02-24T17:56:30.559 36 GSM715432 SRR191645.bw STT5554_Lung c("tissue: lung adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190704 SRX059639 SRR191646 18574509 18574509 1 FALSE FALSE 12601610 433162791 lung ra 2011-04-29T15:45:08.583 2012-08-27T10:05:07.250 2014-02-24T17:56:30.559 36 GSM715432 SRR191646.bw STT5554_Lung c("tissue: lung adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190705 SRX059640 SRR191647 13394902 13394902 1 FALSE FALSE 10793430 373057761 lung ra 2011-04-29T15:45:08.600 2012-08-27T10:05:07.303 2014-02-24T17:56:30.590 36 GSM715433 SRR191647.bw STT5555_Lung c("tissue: lung adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190705 SRX059640 SRR191648 19715909 19715909 1 FALSE FALSE 15604991 544619469 lung ra 2011-04-29T15:45:08.600 2012-08-27T10:05:07.303 2014-02-24T17:56:30.590 36 GSM715433 SRR191648.bw STT5555_Lung c("tissue: lung adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190706 SRX059641 SRR191649 11513937 11513937 1 FALSE FALSE 7610047 243918523 lung ra 2011-04-29T15:45:08.610 2012-08-27T10:05:07.390 2014-02-24T17:56:30.621 36 GSM715434 SRR191649.bw STT5556_Lung c("tissue: lung adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190707 SRX059642 SRR191650 12667054 12667054 1 FALSE FALSE 9623732 327308789 colon ra 2011-04-29T15:45:08.623 2012-08-27T10:05:07.450 2014-02-24T17:56:30.651 36 GSM715435 SRR191650.bw STT5557_Colon c("tissue: colon adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190708 SRX059643 SRR191651 19785924 19785924 1 FALSE FALSE 14964429 509090611 colon ra 2011-04-29T15:45:08.637 2012-08-27T10:05:08.127 2014-02-24T17:56:30.681 36 GSM715436 SRR191651.bw STT5558_Colon c("tissue: colon adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190709 SRX059644 SRR191652 18738522 18738522 1 FALSE FALSE 12873704 430576003 colon ra 2011-04-29T15:45:08.650 2012-08-27T10:05:08.210 2014-02-24T17:56:30.711 36 GSM715437 SRR191652.bw STT5559_Colon c("tissue: colon adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190710 SRX059645 SRR191653 18318684 18318684 1 FALSE FALSE 14719374 502084892 prostate ra 2011-04-29T15:45:08.663 2012-08-27T10:05:08.280 2014-02-24T17:56:30.746 36 GSM715438 SRR191653.bw STT5560_Prostate c("tissue: prostate adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190711 SRX059646 SRR191654 18650019 18650019 1 FALSE FALSE 14852671 514957428 prostate ra 2011-04-29T15:45:08.677 2012-08-27T10:05:08.333 2014-02-24T17:56:30.778 36 GSM715439 SRR191654.bw STT5561_Prostate c("tissue: prostate adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190712 SRX059647 SRR191655 19522856 19522856 1 FALSE FALSE 15060110 523598098 prostate ra 2011-04-29T15:45:08.690 2012-08-27T10:05:08.443 2014-02-24T17:56:30.809 36 GSM715440 SRR191655.bw STT5562_Prostate c("tissue: prostate adenocarcinoma", "tissue archive method: FFPE") SRP006575 SRS190713 SRX059648 SRR191656 15487386 15487386 1 FALSE FALSE 10228790 336692863 breast ra 2011-04-29T15:45:08.703 2012-08-27T10:05:08.550 2014-02-24T17:56:30.843 36 GSM715441 SRR191656.bw STT5535_HN_SCC c("tissue: head and neck squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190714 SRX059649 SRR191657 15921647 15921647 1 FALSE FALSE 10550440 355723124 breast ra 2011-04-29T15:45:08.717 2012-08-27T10:05:08.600 2014-02-24T17:56:30.877 36 GSM715442 SRR191657.bw STT5542_HN_SCC c("tissue: head and neck squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190715 SRX059650 SRR191658 17929601 17929601 1 FALSE FALSE 11354523 378903902 breast ra 2011-04-29T15:45:08.730 2012-08-27T10:05:08.700 2014-02-24T17:56:30.913 36 GSM715443 SRR191658.bw STT5544_HN_SCC c("tissue: head and neck squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190716 SRX059651 SRR191659 17637224 17637224 1 FALSE FALSE 11886008 394985464 breast ra 2011-04-29T15:45:08.743 2012-08-27T10:05:08.750 2014-02-24T17:56:30.951 36 GSM715444 SRR191659.bw STT5545_HN_SCC c("tissue: head and neck squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190717 SRX059652 SRR191660 17687201 17687201 1 FALSE FALSE 12070556 397966139 breast ra 2011-04-29T15:45:08.757 2012-08-27T10:05:08.820 2014-02-24T17:56:30.994 36 GSM715445 SRR191660.bw STT5546_HN_SCC c("tissue: head and neck squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190718 SRX059653 SRR191661 21546803 21546803 1 FALSE FALSE 17396773 606075376 skin ra 2011-04-29T15:45:08.770 2012-08-27T10:05:08.873 2014-02-24T17:56:31.038 36 GSM715446 SRR191661.bw STT5563_Skin_SCC c("tissue: skin squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190719 SRX059654 SRR191662 18286617 18286617 1 FALSE FALSE 14822658 514316757 skin ra 2011-04-29T15:45:08.783 2012-08-27T10:05:08.950 2014-02-24T17:56:31.085 36 GSM715447 SRR191662.bw STT5564_Skin_SCC c("tissue: skin squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190720 SRX059655 SRR191663 28656638 28656638 1 FALSE FALSE 23378098 816222349 skin ra 2011-04-29T15:45:08.793 2012-08-27T10:05:09.047 2014-02-24T17:56:31.125 36 GSM715448 SRR191663.bw STT5565_Skin_SCC c("tissue: skin squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190721 SRX059656 SRR191664 17309595 17309595 1 FALSE FALSE 12708541 423103691 lung ra 2011-04-29T15:45:08.810 2012-08-27T10:05:09.090 2014-02-24T17:56:31.165 36 GSM715449 SRR191664.bw STT5547_Lung_SCC c("tissue: lung squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190722 SRX059657 SRR191665 16379082 16379082 1 FALSE FALSE 10187382 332272040 lung ra 2011-04-29T15:45:08.823 2012-08-27T10:05:09.190 2014-02-24T17:56:31.203 36 GSM715451 SRR191665.bw STT5548_Lung_SCC c("tissue: lung squamous cell carcinoma", "tissue archive method: FFPE") SRP006575 SRS190723 SRX059658 SRR191666 15952954 15952954 1 FALSE FALSE 11233042 371551195 breast ra 2011-04-29T15:45:08.833 2012-08-27T10:05:09.230 2014-02-24T17:56:31.243 36 GSM715452 SRR191666.bw STT5549_PUC c("tissue: papillary urothelial carcinoma", "tissue archive method: FFPE") SRP006575 SRS190724 SRX059659 SRR191667 14453772 14453772 1 FALSE FALSE 10733087 354328454 breast ra 2011-04-29T15:45:08.847 2012-08-27T10:05:09.273 2014-02-24T17:56:31.284 36 GSM715453 SRR191667.bw STT5550_PUC c("tissue: papillary urothelial carcinoma", "tissue archive method: FFPE") SRP006575 SRS190725 SRX059660 SRR191668 10673972 10673972 1 FALSE FALSE 5645414 179083301 breast ra 2011-04-29T15:45:08.860 2012-08-27T10:05:09.340 2014-02-24T17:56:31.324 36 GSM715454 SRR191668.bw STT5551_NPC c("tissue: nasopharyngeal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190725 SRX059660 SRR191669 11918165 11918165 1 FALSE FALSE 6642227 210631743 breast ra 2011-04-29T15:45:08.860 2012-08-27T10:05:09.340 2014-02-24T17:56:31.324 36 GSM715454 SRR191669.bw STT5551_NPC c("tissue: nasopharyngeal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190726 SRX059661 SRR191670 6295264 6295264 1 FALSE FALSE 2214902 67428083 breast ra 2011-04-29T15:45:08.870 2012-08-27T10:05:09.397 2014-02-24T17:56:31.367 36 GSM715455 SRR191670.bw STT5552_NPC c("tissue: nasopharyngeal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190726 SRX059661 SRR191671 6498400 6498400 1 FALSE FALSE 2503940 77300174 breast ra 2011-04-29T15:45:08.870 2012-08-27T10:05:09.397 2014-02-24T17:56:31.367 36 GSM715455 SRR191671.bw STT5552_NPC c("tissue: nasopharyngeal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190727 SRX059662 SRR191672 11120407 11120407 1 FALSE FALSE 3567751 107551513 breast ra 2011-04-29T15:45:08.883 2012-08-27T10:05:09.437 2014-02-24T17:56:31.406 36 GSM715456 SRR191672.bw STT5553_NPC c("tissue: nasopharyngeal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190727 SRX059662 SRR191673 18110537 18110537 1 FALSE FALSE 5762327 176800500 breast ra 2011-04-29T15:45:08.883 2012-08-27T10:05:09.437 2014-02-24T17:56:31.406 36 GSM715456 SRR191673.bw STT5553_NPC c("tissue: nasopharyngeal carcinoma", "tissue archive method: FFPE") SRP006575 SRS190728 SRX059663 SRR191674 17494424 17494424 1 FALSE FALSE 11578943 396066517 breast ra 2011-04-29T15:45:08.897 2012-08-27T10:05:09.477 2014-02-24T17:56:31.449 36 GSM715457 SRR191674.bw STT5519_ESS c("tissue: endometrial stromal sarcoma", "tissue archive method: FFPE") SRP006575 SRS190728 SRX059663 SRR191675 14528470 14528470 1 FALSE FALSE 9806266 329600651 breast ra 2011-04-29T15:45:08.897 2012-08-27T10:05:09.477 2014-02-24T17:56:31.449 36 GSM715457 SRR191675.bw STT5519_ESS c("tissue: endometrial stromal sarcoma", "tissue archive method: FFPE") SRP006575 SRS190729 SRX059664 SRR191677 17064041 17064041 1 FALSE FALSE 10956103 377012999 breast ra 2011-04-29T15:45:08.910 2012-08-27T10:05:09.520 2014-02-24T17:56:31.496 36 GSM715458 SRR191677.bw STT5520_ESS_rep1 c("tissue: endometrial stromal sarcoma", "tissue archive method: FFPE") SRP006575 SRS190730 SRX059665 SRR191678 16927858 16927858 1 FALSE FALSE 9947778 336302199 breast ra 2011-04-29T15:45:08.920 2012-08-27T10:05:09.570 2014-02-24T17:56:31.542 36 GSM715459 SRR191678.bw STT5520_ESS_rep2 c("tissue: endometrial stromal sarcoma", "tissue archive method: FFPE") SRP006575 SRS190731 SRX059666 SRR191679 248655 248655 1 FALSE FALSE 119051 4026866 breast ra 2011-04-29T15:45:08.933 2012-08-27T10:05:09.610 2014-02-24T17:56:31.589 36 GSM715460 SRR191679.bw STT5521_ESS c("tissue: endometrial stromal sarcoma", "tissue archive method: FFPE") SRP006575 SRS190731 SRX059666 SRR191680 17046643 17046643 1 FALSE FALSE 9002235 306830877 breast ra 2011-04-29T15:45:08.933 2012-08-27T10:05:09.610 2014-02-24T17:56:31.589 36 GSM715460 SRR191680.bw STT5521_ESS c("tissue: endometrial stromal sarcoma", "tissue archive method: FFPE") SRP006575 SRS190732 SRX059667 SRR191681 22525260 22525260 1 FALSE FALSE 16196110 526954011 breast ra 2011-04-29T15:45:08.943 2012-08-27T10:05:09.653 2014-02-24T17:56:31.627 36 GSM715461 SRR191681.bw STT5543_ESS c("tissue: endometrial stromal sarcoma", "tissue archive method: FFPE") SRP006575 SRS190733 SRX059668 SRR191682 12868468 12868468 1 FALSE FALSE 8151668 279148904 breast ra 2011-04-29T15:45:08.957 2012-08-27T10:05:09.700 2014-02-24T17:56:31.672 36 GSM715462 SRR191682.bw STT5522_EWS c("tissue: Ewing's sarcoma", "tissue archive method: FFPE") SRP006575 SRS190733 SRX059668 SRR191683 16331809 16331809 1 FALSE FALSE 9868825 335176365 breast ra 2011-04-29T15:45:08.957 2012-08-27T10:05:09.700 2014-02-24T17:56:31.672 36 GSM715462 SRR191683.bw STT5522_EWS c("tissue: Ewing's sarcoma", "tissue archive method: FFPE") SRP006575 SRS190734 SRX059669 SRR191684 210395 210395 1 FALSE FALSE 105613 3693993 breast ra 2011-04-29T15:45:08.967 2012-08-27T10:05:09.760 2014-02-24T17:56:31.727 36 GSM715463 SRR191684.bw STT5523_EWS c("tissue: Ewing's sarcoma", "tissue archive method: FFPE") SRP006575 SRS190734 SRX059669 SRR191685 17811206 17811206 1 FALSE FALSE 12198490 426673951 breast ra 2011-04-29T15:45:08.967 2012-08-27T10:05:09.760 2014-02-24T17:56:31.727 36 GSM715463 SRR191685.bw STT5523_EWS c("tissue: Ewing's sarcoma", "tissue archive method: FFPE") SRP006575 SRS190735 SRX059670 SRR191686 24146719 24146719 1 FALSE FALSE 16923613 559391883 breast ra 2011-04-29T15:45:08.980 2012-08-27T10:05:09.833 2014-02-24T17:56:31.769 36 GSM715464 SRR191686.bw STT5598_EWS c("tissue: Ewing's sarcoma", "tissue archive method: FFPE") SRP006575 SRS190736 SRX059671 SRR191687 20116142 20116142 1 FALSE FALSE 15762203 522475045 breast ra 2011-04-29T15:45:08.990 2012-08-27T10:05:09.870 2014-02-24T17:56:31.816 36 GSM715465 SRR191687.bw STT5600_EWS c("tissue: Ewing's sarcoma", "tissue archive method: FFPE") SRP006575 SRS190737 SRX059672 SRR191688 15160299 15160299 1 FALSE FALSE 8957972 300806001 breast ra 2011-04-29T15:45:09.003 2012-08-27T10:05:09.907 2014-02-24T17:56:31.855 36 GSM715466 SRR191688.bw STT5525_EMC c("tissue: extraskeletal myxoid chondrosarcoma", "tissue archive method: FFPE") SRP006575 SRS190738 SRX059673 SRR191689 14968313 14968313 1 FALSE FALSE 10119948 335927654 breast ra 2011-04-29T15:45:09.017 2012-08-27T10:05:09.947 2014-02-24T17:56:31.894 36 GSM715467 SRR191689.bw STT5526_EMC c("tissue: extraskeletal myxoid chondrosarcoma", "tissue archive method: FFPE") SRP006575 SRS190739 SRX059674 SRR191690 14805484 14805484 1 FALSE FALSE 6613400 209279487 breast ra 2011-04-29T15:45:09.030 2012-08-27T10:05:10.020 2014-02-24T17:56:31.937 36 GSM715470 SRR191690.bw STT5527_EMC c("tissue: extraskeletal myxoid chondrosarcoma", "tissue archive method: FFPE") SRP006575 SRS190740 SRX059675 SRR191691 22051850 22051850 1 FALSE FALSE 18571125 638538188 breast ra 2011-04-29T15:45:09.040 2012-08-27T10:05:10.120 2014-02-24T17:56:31.975 36 GSM715472 SRR191691.bw STT5592_EMC c("tissue: extraskeletal myxoid chondrosarcoma", "tissue archive method: FFPE") SRP006575 SRS190741 SRX059676 SRR191692 15696081 15696081 1 FALSE FALSE 9545158 313350956 breast ra 2011-04-29T15:45:09.053 2012-08-27T10:05:10.183 2014-02-24T17:56:32.065 36 GSM715475 SRR191692.bw STT3705_SS c("tissue: synovial sarcoma", "tissue archive method: FFPE") SRP006575 SRS190742 SRX059677 SRR191693 13831588 13831588 1 FALSE FALSE 9698062 330482653 breast ra 2011-04-29T15:45:09.063 2012-08-27T10:05:10.220 2014-02-24T17:56:32.157 36 GSM715477 SRR191693.bw STT5532_SS c("tissue: synovial sarcoma", "tissue archive method: FFPE") SRP006575 SRS190743 SRX059678 SRR191694 13892060 13892060 1 FALSE FALSE 7845580 256155718 breast ra 2011-04-29T15:45:09.077 2012-08-27T10:05:10.260 2014-02-24T17:56:32.252 36 GSM715478 SRR191694.bw STT5533_SS c("tissue: synovial sarcoma", "tissue archive method: FFPE") SRP006575 SRS190744 SRX059679 SRR191695 11749394 11749394 1 FALSE FALSE 5468491 168011182 breast ra 2011-04-29T15:45:09.090 2012-08-27T10:05:10.317 2014-02-24T17:56:32.330 36 GSM715479 SRR191695.bw STT5530_MLS c("tissue: myxoid liposarcoma", "tissue archive method: FFPE") SRP006575 SRS190744 SRX059679 SRR191696 7388194 7388194 1 FALSE FALSE 3397364 105133279 breast ra 2011-04-29T15:45:09.090 2012-08-27T10:05:10.317 2014-02-24T17:56:32.330 36 GSM715479 SRR191696.bw STT5530_MLS c("tissue: myxoid liposarcoma", "tissue archive method: FFPE") SRP006575 SRS190745 SRX059680 SRR191697 14574603 14574603 1 FALSE FALSE 7065483 229211626 breast ra 2011-04-29T15:45:09.100 2012-08-27T10:05:10.380 2014-02-24T17:56:32.423 36 GSM715480 SRR191697.bw STT5531_MLS c("tissue: myxoid liposarcoma", "tissue archive method: FFPE") SRP006575 SRS190746 SRX059681 SRR191698 21000764 21000764 1 FALSE FALSE 16829860 565947319 breast ra 2011-04-29T15:45:09.110 2012-08-27T10:05:10.417 2014-02-24T17:56:32.510 36 GSM715481 SRR191698.bw STT5590_MLS c("tissue: myxoid liposarcoma", "tissue archive method: FFPE") SRP006575 SRS190747 SRX059682 SRR191699 21103429 21103429 1 FALSE FALSE 17083651 579891011 breast ra 2011-04-29T15:45:09.123 2012-08-27T10:05:10.457 2014-02-24T17:56:32.608 36 GSM715482 SRR191699.bw STT5591_MLS c("tissue: myxoid liposarcoma", "tissue archive method: FFPE") SRP006575 SRS190748 SRX059683 SRR191700 14762979 14762979 1 FALSE FALSE 9956100 315367902 breast ra 2011-04-29T15:45:09.137 2012-08-27T10:05:10.570 2014-02-24T17:56:32.689 36 GSM715483 SRR191700.bw STT5595_MLS c("tissue: myxoid liposarcoma", "tissue archive method: FFPE") SRP006575 SRS190749 SRX059684 SRR191701 15511465 15511465 1 FALSE FALSE 11731795 381960679 breast ra 2011-04-29T15:45:09.147 2012-08-27T10:05:10.610 2014-02-24T17:56:32.722 36 GSM715484 SRR191701.bw STT5596_MLS c("tissue: myxoid liposarcoma", "tissue archive method: FFPE") SRP006575 SRS190750 SRX059685 SRR191702 7196552 7196552 1 FALSE FALSE 3973735 134360994 breast ra 2011-04-29T15:45:09.160 2012-08-27T10:05:10.647 2014-02-24T17:56:32.756 36 GSM715485 SRR191702.bw STT111_GIST c("tissue: gastrointestinal stromal tumor", "tissue archive method: FFPE") SRP006575 SRS190750 SRX059685 SRR191703 11907496 11907496 1 FALSE FALSE 6201250 203876688 breast ra 2011-04-29T15:45:09.160 2012-08-27T10:05:10.647 2014-02-24T17:56:32.756 36 GSM715485 SRR191703.bw STT111_GIST c("tissue: gastrointestinal stromal tumor", "tissue archive method: FFPE") SRP006575 SRS190751 SRX059686 SRR191704 426511 426511 1 FALSE FALSE 132637 4443744 breast ra 2011-04-29T15:45:09.170 2012-08-27T10:05:10.710 2014-02-24T17:56:32.792 36 GSM715486 SRR191704.bw STT1823_GIST c("tissue: gastrointestinal stromal tumor", "tissue archive method: FFPE") SRP006575 SRS190751 SRX059686 SRR191705 14244574 14244574 1 FALSE FALSE 4493497 146702611 breast ra 2011-04-29T15:45:09.170 2012-08-27T10:05:10.710 2014-02-24T17:56:32.792 36 GSM715486 SRR191705.bw STT1823_GIST c("tissue: gastrointestinal stromal tumor", "tissue archive method: FFPE") SRP006575 SRS190752 SRX059687 SRR191706 11549540 11549540 1 FALSE FALSE 4549169 151114076 breast ra 2011-04-29T15:45:09.183 2012-08-27T10:05:10.750 2014-02-24T17:56:32.829 36 GSM715487 SRR191706.bw STT2145_GIST c("tissue: gastrointestinal stromal tumor", "tissue archive method: FFPE") SRP006575 SRS190753 SRX059688 SRR191707 20950349 20950349 1 FALSE FALSE 16821924 572808725 breast ra 2011-04-29T15:45:09.193 2012-08-27T10:05:10.787 2014-02-24T17:56:32.872 36 GSM715488 SRR191707.bw STT5593_GIST c("tissue: gastrointestinal stromal tumor", "tissue archive method: FFPE") SRP006575 SRS190754 SRX059689 SRR191708 21291392 21291392 1 FALSE FALSE 16427082 547507082 breast ra 2011-04-29T15:45:09.207 2012-08-27T10:05:10.827 2014-02-24T17:56:32.911 36 GSM715489 SRR191708.bw STT5594_GIST c("tissue: gastrointestinal stromal tumor", "tissue archive method: FFPE") SRP006575 SRS190755 SRX059690 SRR191709 24333242 24333242 1 FALSE FALSE 18340303 611662460 breast ra 2011-04-29T15:45:09.217 2012-08-27T10:05:10.867 2014-02-24T17:56:32.976 36 GSM715490 SRR191709.bw STT5597_GIST c("tissue: gastrointestinal stromal tumor", "tissue archive method: FFPE") SRP006575 SRS190756 SRX059691 SRR191710 18814048 18814048 1 FALSE FALSE 15096296 505367084 breast ra 2011-04-29T15:45:09.230 2012-08-27T10:05:10.900 2014-02-24T17:56:33.024 36 GSM715491 SRR191710.bw STT5599_GIST c("tissue: gastrointestinal stromal tumor", "tissue archive method: FFPE") SRP006575 SRS190757 SRX059692 SRR191711 14639672 14639672 1 FALSE FALSE 5601617 193245678 breast ra 2011-04-29T15:45:09.240 2012-08-27T10:05:10.940 2014-02-24T17:56:33.067 36 GSM715492 SRR191711.bw STT516_LMS_rep1 c("tissue: leiomyosarcoma", "tissue archive method: FFPE") SRP006575 SRS190758 SRX059693 SRR191712 13875981 13875981 1 FALSE FALSE 5807995 187233344 breast ra 2011-04-29T15:45:09.253 2012-08-27T10:05:11.000 2014-02-24T17:56:33.104 36 GSM715493 SRR191712.bw STT516_LMS_rep2 c("tissue: leiomyosarcoma", "tissue archive method: FFPE") SRP006575 SRS190759 SRX059694 SRR191713 304723 304723 1 FALSE FALSE 133276 4604885 breast ra 2011-04-29T15:45:09.263 2012-08-27T10:05:11.053 2014-02-24T17:56:33.149 36 GSM715494 SRR191713.bw STT1220_LMS c("tissue: leiomyosarcoma", "tissue archive method: FFPE") SRP006575 SRS190759 SRX059694 SRR191714 15489363 15489363 1 FALSE FALSE 8032826 273601984 breast ra 2011-04-29T15:45:09.263 2012-08-27T10:05:11.053 2014-02-24T17:56:33.149 36 GSM715494 SRR191714.bw STT1220_LMS c("tissue: leiomyosarcoma", "tissue archive method: FFPE") SRP006575 SRS190760 SRX059695 SRR191715 16777588 16777588 1 FALSE FALSE 8937944 308410769 breast ra 2011-04-29T15:45:09.277 2012-08-27T10:05:11.107 2014-02-24T17:56:33.185 36 GSM715495 SRR191715.bw STT5528_LMS c("tissue: leiomyosarcoma", "tissue archive method: FFPE") SRP006575 SRS190761 SRX059696 SRR191716 17370014 17370014 1 FALSE FALSE 7913661 266608445 breast ra 2011-04-29T15:45:09.287 2012-08-27T10:05:11.180 2014-02-24T17:56:33.221 36 GSM715496 SRR191716.bw STT5534_DDLPS c("tissue: dedifferentiated liposarcoma", "tissue archive method: FFPE") SRP006575 SRS190762 SRX059697 SRR191717 16738141 16738141 1 FALSE FALSE 11140623 370862966 breast ra 2011-04-29T15:45:09.300 2012-08-27T10:05:11.220 2014-02-24T17:56:33.303 36 GSM715497 SRR191717.bw STT5517_DDLPS c("tissue: dedifferentiated liposarcoma", "tissue archive method: FFPE") SRP006575 SRS190763 SRX059698 SRR191718 15503261 15503261 1 FALSE FALSE 7305485 241069523 breast ra 2011-04-29T15:45:09.310 2012-08-27T10:05:11.257 2014-02-24T17:56:33.341 36 GSM715498 SRR191718.bw STT5518_DDLPS c("tissue: dedifferentiated liposarcoma", "tissue archive method: FFPE") SRP006575 SRS355564 SRX176088 SRR537099 9046085 9046085 1 FALSE FALSE 5528760 192665572 breast ra 2012-08-13T13:05:51.517 2012-08-27T10:05:12.807 2014-03-06T16:22:02.122 36 GSM984203 SRR537099.bw STT5425_Adult_normal_breast c("tissue: breast", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355564 SRX176088 SRR537100 14289368 14289368 1 FALSE FALSE 8743275 306074997 breast ra 2012-08-13T13:05:51.517 2012-08-27T10:05:12.807 2014-03-06T16:22:02.122 36 GSM984203 SRR537100.bw STT5425_Adult_normal_breast c("tissue: breast", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355565 SRX176089 SRR537101 15390781 15390781 1 FALSE FALSE 5655966 195700083 breast ra 2012-08-13T13:05:51.723 2012-08-27T10:05:12.960 2014-03-06T16:22:02.164 36 GSM984204 SRR537101.bw STT5451_Adult_normal_breast c("tissue: breast", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355566 SRX176090 SRR537102 17738943 17738943 1 FALSE FALSE 13377254 468288914 breast ra 2012-08-13T13:05:51.770 2012-08-27T10:05:13.000 2014-03-06T16:22:02.202 36 GSM984205 SRR537102.bw STT5510_Adult_normal_breast c("tissue: breast", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355568 SRX176092 SRR537104 24250892 24250892 1 FALSE FALSE 21091113 709840670 breast ra 2012-08-13T13:05:51.853 2012-08-27T10:05:13.107 2014-03-06T16:22:02.270 36 GSM984207 SRR537104.bw STT5761_Adult_normal_breast c("tissue: breast", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355569 SRX176093 SRR537105 24064949 24064949 1 FALSE FALSE 18606336 631703586 lung ra 2012-08-13T13:05:51.893 2012-08-27T10:05:13.150 2014-03-06T16:22:02.304 36 GSM984208 SRR537105.bw STT5601_Adult_normal_lung c("tissue: lung", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355570 SRX176094 SRR537106 25037709 25037709 1 FALSE FALSE 17193344 578869362 lung ra 2012-08-13T13:05:51.973 2012-08-27T10:05:13.197 2014-03-06T16:22:02.338 36 GSM984209 SRR537106.bw STT5603_Adult_normal_lung c("tissue: lung", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355571 SRX176095 SRR537107 30671833 30671833 1 FALSE FALSE 23958470 813207904 lung ra 2012-08-13T13:05:52.010 2012-08-27T10:05:13.243 2014-03-06T16:22:02.372 36 GSM984210 SRR537107.bw STT5697_Adult_normal_lung c("tissue: lung", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355572 SRX176096 SRR537108 30524094 30524094 1 FALSE FALSE 25878942 889016875 lung ra 2012-08-13T13:05:52.057 2012-08-27T10:05:13.290 2014-03-06T16:22:02.409 36 GSM984211 SRR537108.bw STT5698_Adult_normal_lung c("tissue: lung", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355573 SRX176097 SRR537109 39502338 39502338 1 FALSE FALSE 31750963 1093937036 lung ra 2012-08-13T13:05:52.090 2012-08-27T10:05:13.333 2014-03-06T16:22:02.444 36 GSM984212 SRR537109.bw STT5699_Adult_normal_lung c("tissue: lung", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355574 SRX176098 SRR537110 24070936 24070936 1 FALSE FALSE 20832729 727607152 colon ra 2012-08-13T13:05:52.163 2012-08-27T10:05:13.380 2014-03-06T16:22:02.481 36 GSM984213 SRR537110.bw STT5610_Adult_normal_colon c("tissue: colon", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355575 SRX176099 SRR537111 25300489 25300489 1 FALSE FALSE 16096738 541835974 colon ra 2012-08-13T13:05:52.263 2012-08-27T10:05:13.427 2014-03-06T16:22:02.521 36 GSM984214 SRR537111.bw STT5692_Adult_normal_colon c("tissue: colon", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355577 SRX176101 SRR537113 36048150 36048150 1 FALSE FALSE 23027372 762101767 kidney ra 2012-08-13T13:05:52.390 2012-08-27T10:05:13.510 2014-03-06T16:22:02.591 36 GSM984216 SRR537113.bw STT5694_Adult_normal_kidney c("tissue: kidney", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355578 SRX176102 SRR537114 24181042 24181042 1 FALSE FALSE 8143024 229152808 kidney ra 2012-08-13T13:05:52.453 2012-08-27T10:05:13.557 2014-03-06T16:22:02.626 36 GSM984217 SRR537114.bw STT5695_Adult_normal_kidney c("tissue: kidney", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355579 SRX176103 SRR537115 24183970 24183970 1 FALSE FALSE 9493010 278828503 kidney ra 2012-08-13T13:05:52.497 2012-08-27T10:05:13.617 2014-03-06T16:22:02.690 36 GSM984218 SRR537115.bw STT5696_Adult_normal_kidney c("tissue: kidney", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355580 SRX176104 SRR537116 19806069 19806069 1 FALSE FALSE 13874057 462751326 breast ra 2012-08-13T13:05:52.550 2012-08-27T10:05:13.660 2014-03-06T16:22:02.777 36 GSM984219 SRR537116.bw STT5609_Adult_normal_uterus c("tissue: uterus", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355581 SRX176105 SRR537117 23249736 23249736 1 FALSE FALSE 17930864 604969763 lung ra 2012-08-13T13:05:52.630 2012-08-27T10:05:13.710 2014-03-06T16:22:02.846 36 GSM984220 SRR537117.bw STT5588_Fetal_normal_lung c("tissue: lung", "developmental stage: fetal", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355582 SRX176106 SRR537118 31525415 31525415 1 FALSE FALSE 26298941 876269616 lung ra 2012-08-13T13:05:52.830 2012-08-27T10:05:13.757 2014-03-06T16:22:02.930 36 GSM984221 SRR537118.bw STT5686_Fetal_normal_lung c("tissue: lung", "developmental stage: fetal, 14wks", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355583 SRX176107 SRR537119 30551321 30551321 1 FALSE FALSE 26199534 889518570 lung ra 2012-08-13T13:05:53.247 2012-08-27T10:05:13.803 2014-03-06T16:22:03.019 36 GSM984222 SRR537119.bw STT5687_Fetal_normal_lung c("tissue: lung", "developmental stage: fetal, 15wks", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355584 SRX176108 SRR537120 22308181 22308181 1 FALSE FALSE 13246167 434793984 lung ra 2012-08-13T13:05:54.250 2012-08-27T10:05:13.860 2014-03-06T16:22:03.105 36 GSM984223 SRR537120.bw STT5688_Fetal_normal_lung c("tissue: lung", "developmental stage: fetal, 13wks", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355585 SRX176109 SRR537121 27434416 27434416 1 FALSE FALSE 23365625 777142276 intestine ra 2012-08-13T13:05:56.467 2012-08-27T10:05:13.910 2014-03-06T16:22:03.190 36 GSM984224 SRR537121.bw STT5680_Fetal_normal_bowel c("tissue: bowel", "developmental stage: fetal, 14wks", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355586 SRX176110 SRR537122 21303944 21303944 1 FALSE FALSE 16103524 533504182 intestine ra 2012-08-13T13:05:56.530 2012-08-27T10:05:14.007 2014-03-06T16:22:03.279 36 GSM984225 SRR537122.bw STT5681_Fetal_normal_bowel c("tissue: bowel", "developmental stage: fetal, 15wks", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355587 SRX176111 SRR537123 25861889 25861889 1 FALSE FALSE 19296468 633845716 intestine ra 2012-08-13T13:05:56.567 2012-08-27T10:05:14.070 2014-03-06T16:22:03.376 36 GSM984226 SRR537123.bw STT5682_Fetal_normal_bowel c("tissue: bowel", "developmental stage: fetal, 13wks", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355588 SRX176112 SRR537124 20753084 20753084 1 FALSE FALSE 14336240 458971572 kidney ra 2012-08-13T13:05:56.603 2012-08-27T10:05:14.120 2014-03-06T16:22:03.473 36 GSM984227 SRR537124.bw STT5683_Fetal_normal_kidney c("tissue: kidney", "developmental stage: fetal, 15wks", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355589 SRX176113 SRR537125 30152968 30152968 1 FALSE FALSE 25468966 855472672 kidney ra 2012-08-13T13:05:56.780 2012-08-27T10:05:14.163 2014-03-06T16:22:03.543 36 GSM984228 SRR537125.bw STT5684_Fetal_normal_kidney c("tissue: kidney", "developmental stage: fetal, 15wks", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355590 SRX176114 SRR537126 29940144 29940144 1 FALSE FALSE 24238204 799230117 kidney ra 2012-08-13T13:05:56.880 2012-08-27T10:05:14.207 2014-03-06T16:22:03.573 36 GSM984229 SRR537126.bw STT5685_Fetal_normal_kidney c("tissue: kidney", "developmental stage: fetal, 14wks", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355591 SRX176115 SRR537127 40175194 40175194 1 TRUE FALSE 39271327 1402553792 breast ra 2012-08-13T13:05:57.007 2012-08-27T10:05:14.267 2014-03-06T16:22:03.604 72 GSM984230 SRR537127.bw CAMA-1 c("cell line: CAMA-1", "cell type: breast cancer cells") SRP006575 SRS355592 SRX176116 SRR537128 36069474 36069474 1 TRUE FALSE 34914776 1044971139 breast ra 2012-08-13T13:05:57.103 2012-08-27T10:05:14.317 2014-03-06T16:22:03.636 60 GSM984231 SRR537128.bw HCC1419 c("cell line: HCC1419", "cell type: breast cancer cells") SRP006575 SRS355593 SRX176117 SRR537129 35241608 35241608 1 TRUE FALSE 34680845 1239856077 breast ra 2012-08-13T13:05:57.193 2012-08-27T10:05:14.360 2014-03-06T16:22:03.670 72 GSM984232 SRR537129.bw HCC1500 c("cell line: HCC1500", "cell type: breast cancer cells") SRP006575 SRS355594 SRX176118 SRR537130 17667236 17667236 1 TRUE FALSE 17450951 522546929 breast ra 2012-08-13T13:05:57.240 2012-08-27T10:05:14.470 2014-03-06T16:22:03.704 60 GSM984233 SRR537130.bw SUM 44PE c("cell line: SUM 44PE", "cell type: breast cancer cells") SRP006575 SRS355595 SRX176119 SRR537131 32586656 32586656 1 TRUE FALSE 31800304 950961397 breast ra 2012-08-13T13:05:57.330 2012-08-27T10:05:14.517 2014-03-06T16:22:03.743 60 GSM984234 SRR537131.bw UACC-812 c("cell line: UACC-812", "cell type: breast cancer cells") SRP006575 SRS355596 SRX176120 SRR537132 36779998 36779998 1 TRUE FALSE 35732319 1069638926 breast ra 2012-08-13T13:05:57.447 2012-08-27T10:05:14.623 2014-03-06T16:22:03.773 60 GSM984235 SRR537132.bw ZR-75-30 c("cell line: ZR-75-30", "cell type: breast cancer cells") SRP006575 SRS190729 SRX059664 SRR191676 1430073 0 0 FALSE FALSE 0 NA breast ra 2011-04-29T15:45:08.910 2012-08-27T10:05:09.520 2014-02-24T17:56:31.496 36 GSM715458 NA STT5520_ESS_rep1 c("tissue: endometrial stromal sarcoma", "tissue archive method: FFPE") SRP006575 SRS355567 SRX176091 SRR537103 18493599 0 0 FALSE FALSE 0 NA breast ra 2012-08-13T13:05:51.817 2012-08-27T10:05:13.060 2014-03-06T16:22:02.235 36 GSM984206 NA STT5620_Adult_normal_breast c("tissue: breast", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE") SRP006575 SRS355576 SRX176100 SRR537112 29455137 0 0 FALSE FALSE 0 NA colon ra 2012-08-13T13:05:52.300 2012-08-27T10:05:13.470 2014-03-06T16:22:02.556 36 GSM984215 NA STT5693_Adult_normal_colon c("tissue: colon", "developmental stage: adult", "disease status: normal", "tissue archive method: FFPE")