project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP007461 SRS214591 SRX082565 SRR307897 64428752 64428752 1 TRUE FALSE 59134061 4449092550 blood gm12878 2011-07-12T15:38:06.227 2011-07-12T15:38:06.963 2014-12-24T01:50:15.220 152 GSM758559 SRR307897.bw CSHL_RnaSeq_GM12878_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003WC,003WC,004WC,004WC", "labexpid: LID16629,LID16629,LID16630,LID16630", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003WC,004WC", "labexpid: LID16629,LID16630", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214591 SRX082565 SRR307898 94000204 94000204 1 TRUE FALSE 89588836 6773753099 blood gm12878 2011-07-12T15:38:06.227 2011-07-12T15:38:06.963 2014-12-24T01:50:15.220 152 GSM758559 SRR307898.bw CSHL_RnaSeq_GM12878_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003WC,003WC,004WC,004WC", "labexpid: LID16629,LID16629,LID16630,LID16630", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003WC,004WC", "labexpid: LID16629,LID16630", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214592 SRX082566 SRR307899 85381672 85381672 1 TRUE FALSE 81927993 6183281850 blood gm12878 2011-07-12T15:38:06.257 2011-07-12T15:38:06.963 2014-08-27T03:50:17.827 152 GSM758560 SRR307899.bw CSHL_RnaSeq_GM12878_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 004C,003C,004C,003C", "labexpid: LID8467,LID8468,LID8467,LID8468", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003C,004C", "labexpid: LID8467,LID8468", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214592 SRX082566 SRR307900 73159270 73159270 1 TRUE FALSE 70890578 5347128685 blood gm12878 2011-07-12T15:38:06.257 2011-07-12T15:38:06.963 2014-08-27T03:50:17.827 152 GSM758560 SRR307900.bw CSHL_RnaSeq_GM12878_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 004C,003C,004C,003C", "labexpid: LID8467,LID8468,LID8467,LID8468", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003C,004C", "labexpid: LID8467,LID8468", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214593 SRX082567 SRR307901 80381908 80381908 1 TRUE FALSE 72964205 5478174465 lung other 2011-07-12T15:38:06.290 2011-07-12T15:38:06.963 2014-12-24T01:53:16.327 152 GSM758561 SRR307901.bw CSHL_RnaSeq_AG04450_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 018WC,017WC,018WC,017WC", "labexpid: LID8965,LID8966,LID8966,LID8965", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 017WC,018WC", "labexpid: LID8965,LID8966", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214593 SRX082567 SRR307902 79304014 79304014 1 TRUE FALSE 71453509 5354577447 lung other 2011-07-12T15:38:06.290 2011-07-12T15:38:06.963 2014-12-24T01:53:16.327 152 GSM758561 SRR307902.bw CSHL_RnaSeq_AG04450_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 018WC,017WC,018WC,017WC", "labexpid: LID8965,LID8966,LID8966,LID8965", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 017WC,018WC", "labexpid: LID8965,LID8966", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214594 SRX082568 SRR307903 72020072 72020072 1 TRUE FALSE 70141995 5298891509 skin bj 2011-07-12T15:38:06.320 2011-07-12T15:38:06.963 2014-08-27T03:50:18.377 152 GSM758562 SRR307903.bw CSHL_RnaSeq_BJ_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: skin fibroblast, \"The line was established from skin taken from normal foreskin.\" - ATCC. (PMID: 9916803)", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 037WC,038WC,037WC,038WC", "labexpid: LID8970,LID8969,LID8970,LID8969", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 037WC,038WC", "labexpid: LID8969,LID8970", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214594 SRX082568 SRR307904 72919266 72919266 1 TRUE FALSE 70885607 5342954323 skin bj 2011-07-12T15:38:06.320 2011-07-12T15:38:06.963 2014-08-27T03:50:18.377 152 GSM758562 SRR307904.bw CSHL_RnaSeq_BJ_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: skin fibroblast, \"The line was established from skin taken from normal foreskin.\" - ATCC. (PMID: 9916803)", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 037WC,038WC,037WC,038WC", "labexpid: LID8970,LID8969,LID8970,LID8969", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 037WC,038WC", "labexpid: LID8969,LID8970", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214595 SRX082569 SRR307905 57190614 57190614 1 TRUE FALSE 55622798 4190512530 blood vessel huvec 2011-07-12T15:38:06.353 2011-07-12T15:38:06.963 2014-08-27T03:50:18.620 152 GSM758563 SRR307905.bw CSHL_RnaSeq_HUVEC_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 009WC,010WC,009WC,010WC", "labexpid: LID8463,LID8464,LID8464,LID8463", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 009WC,010WC", "labexpid: LID8463,LID8464", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214595 SRX082569 SRR307906 71738538 71738538 1 TRUE FALSE 70208821 5286389653 blood vessel huvec 2011-07-12T15:38:06.353 2011-07-12T15:38:06.963 2014-08-27T03:50:18.620 152 GSM758563 SRR307906.bw CSHL_RnaSeq_HUVEC_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 009WC,010WC,009WC,010WC", "labexpid: LID8463,LID8464,LID8464,LID8463", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 009WC,010WC", "labexpid: LID8463,LID8464", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214596 SRX082570 SRR307907 61600842 61600842 1 TRUE FALSE 60547687 4576489506 epithelium a549 2011-07-12T15:38:06.383 2011-07-12T15:38:06.963 2014-08-27T03:50:18.910 152 GSM758564 SRR307907.bw CSHL_RnaSeq_A549_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 021WC,021WC,022WC,022WC", "labexpid: LID8963,LID8964,LID8964,LID8963", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 021WC,022WC", "labexpid: LID8963,LID8964", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214596 SRX082570 SRR307908 79313626 79313626 1 TRUE FALSE 78159088 5906000592 epithelium a549 2011-07-12T15:38:06.383 2011-07-12T15:38:06.963 2014-08-27T03:50:18.910 152 GSM758564 SRR307908.bw CSHL_RnaSeq_A549_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 021WC,021WC,022WC,022WC", "labexpid: LID8963,LID8964,LID8964,LID8963", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 021WC,022WC", "labexpid: LID8963,LID8964", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214597 SRX082571 SRR307909 77660786 77660786 1 TRUE FALSE 74301713 5607913311 blood vessel huvec 2011-07-12T15:38:06.417 2011-07-12T15:38:06.963 2014-08-27T01:22:39.870 152 GSM758565 SRR307909.bw CSHL_RnaSeq_HUVEC_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029N,030N,030N,029N", "labexpid: LID8690,LID8691,LID8691,LID8690", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029N,030N", "labexpid: LID8690,LID8691", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214597 SRX082571 SRR307910 75386752 75386752 1 TRUE FALSE 72334947 5461352906 blood vessel huvec 2011-07-12T15:38:06.417 2011-07-12T15:38:06.963 2014-08-27T01:22:39.870 152 GSM758565 SRR307910.bw CSHL_RnaSeq_HUVEC_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029N,030N,030N,029N", "labexpid: LID8690,LID8691,LID8691,LID8690", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029N,030N", "labexpid: LID8690,LID8691", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214598 SRX082572 SRR307911 82839646 82839646 1 TRUE FALSE 80767097 6080098452 stem cell esc 2011-07-12T15:38:06.450 2011-07-12T15:38:06.963 2014-08-27T01:27:29.280 152 GSM758566 SRR307911.bw CSHL_RnaSeq_H1-hESC_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006WC,005WC,006WC,005WC", "labexpid: LID8461,LID8462,LID8462,LID8461", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 005WC,006WC", "labexpid: LID8461,LID8462", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214598 SRX082572 SRR307912 73755072 73755072 1 TRUE FALSE 70646712 5322690993 stem cell esc 2011-07-12T15:38:06.450 2011-07-12T15:38:06.963 2014-08-27T01:27:29.280 152 GSM758566 SRR307912.bw CSHL_RnaSeq_H1-hESC_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006WC,005WC,006WC,005WC", "labexpid: LID8461,LID8462,LID8462,LID8461", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 005WC,006WC", "labexpid: LID8461,LID8462", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214599 SRX082573 SRR307913 67967856 67967856 1 TRUE FALSE 58141915 4285640752 liver hepg2 2011-07-12T15:38:06.480 2011-07-12T15:38:06.963 2014-08-27T01:27:29.953 152 GSM758567 SRR307913.bw CSHL_RnaSeq_HepG2_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 014WC,013WC,013WC,014WC", "labexpid: LID8792,LID8793,LID8792,LID8793", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 013WC,014WC", "labexpid: LID8792,LID8793", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214599 SRX082573 SRR307914 68706156 68706156 1 TRUE FALSE 61490151 4592019601 liver hepg2 2011-07-12T15:38:06.480 2011-07-12T15:38:06.963 2014-08-27T01:27:29.953 152 GSM758567 SRR307914.bw CSHL_RnaSeq_HepG2_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 014WC,013WC,013WC,014WC", "labexpid: LID8792,LID8793,LID8792,LID8793", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 013WC,014WC", "labexpid: LID8792,LID8793", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214600 SRX082574 SRR307915 68366180 68366180 1 TRUE FALSE 64215324 4849852867 liver hepg2 2011-07-12T15:38:06.513 2011-07-12T15:38:06.963 2014-08-27T01:27:30.580 152 GSM758568 SRR307915.bw CSHL_RnaSeq_HepG2_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013N,013N,014N,014N", "labexpid: LID8534,LID8535,LID8534,LID8535", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013N,014N", "labexpid: LID8534,LID8535", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214600 SRX082574 SRR307916 57069134 57069134 1 TRUE FALSE 53223956 4010795290 liver hepg2 2011-07-12T15:38:06.513 2011-07-12T15:38:06.963 2014-08-27T01:27:30.580 152 GSM758568 SRR307916.bw CSHL_RnaSeq_HepG2_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013N,013N,014N,014N", "labexpid: LID8534,LID8535,LID8534,LID8535", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013N,014N", "labexpid: LID8534,LID8535", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214601 SRX082575 SRR307917 81173946 81173946 1 TRUE FALSE 77352566 5840655551 blood vessel huvec 2011-07-12T15:38:06.547 2011-07-12T15:38:06.963 2014-08-27T01:27:31.530 152 GSM758569 SRR307917.bw CSHL_RnaSeq_HUVEC_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029C,030C,029C,030C", "labexpid: LID8688,LID8689,LID8688,LID8689", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029C,030C", "labexpid: LID8688,LID8689", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214601 SRX082575 SRR307918 74163098 74163098 1 TRUE FALSE 70924312 5343322897 blood vessel huvec 2011-07-12T15:38:06.547 2011-07-12T15:38:06.963 2014-08-27T01:27:31.530 152 GSM758569 SRR307918.bw CSHL_RnaSeq_HUVEC_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029C,030C,029C,030C", "labexpid: LID8688,LID8689,LID8688,LID8689", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029C,030C", "labexpid: LID8688,LID8689", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214602 SRX082576 SRR307919 65289284 65289284 1 TRUE FALSE 62827389 4746443076 stem cell esc 2011-07-12T15:38:06.580 2011-07-12T15:38:06.963 2014-08-27T01:27:31.767 152 GSM758570 SRR307919.bw CSHL_RnaSeq_H1-hESC_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006C", "labexpid: LID8536", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 2", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006C", "labexpid: LID8536", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214603 SRX082577 SRR307920 83577886 83577886 1 TRUE FALSE 80457281 6082179672 breast other 2011-07-12T15:38:06.610 2011-07-12T15:38:06.963 2014-08-27T01:27:32.080 152 GSM758571 SRR307920.bw CSHL_RnaSeq_HMEC_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell karyotype: normal", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 036WC", "labexpid: LID8695", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1", "spikeinpool: Nist14", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 036WC", "labexpid: LID8695", "labversion: iIDR", "spikeinpool: NIST14" ) SRP007461 SRS214604 SRX082578 SRR307921 77801326 77801326 1 TRUE FALSE 66193700 4973310239 blood gm12878 2011-07-12T15:38:06.643 2011-07-12T15:38:06.963 2014-08-27T01:27:32.563 152 GSM758572 SRR307921.bw CSHL_RnaSeq_GM12878_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003WC,004WC,003WC,004WC", "labexpid: LID8661,LID8662,LID8661,LID8662", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003WC,004WC", "labexpid: LID8661,LID8662", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214604 SRX082578 SRR307922 61113728 61113728 1 TRUE FALSE 54475934 3885303128 blood gm12878 2011-07-12T15:38:06.643 2011-07-12T15:38:06.963 2014-08-27T01:27:32.563 152 GSM758572 SRR307922.bw CSHL_RnaSeq_GM12878_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003WC,004WC,003WC,004WC", "labexpid: LID8661,LID8662,LID8661,LID8662", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003WC,004WC", "labexpid: LID8661,LID8662", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214605 SRX082579 SRR307923 63432226 63432226 1 TRUE FALSE 53757065 4028016333 stem cell esc 2011-07-12T15:38:06.677 2011-07-12T15:38:06.963 2014-08-27T01:27:32.920 152 GSM758573 SRR307923.bw CSHL_RnaSeq_H1-hESC_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 006WC,005WC,006WC,005WC", "labexpid: LID8664,LID8663,LID8664,LID8663", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 005WC,006WC", "labexpid: LID8663,LID8664", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214605 SRX082579 SRR307924 62406072 62406072 1 TRUE FALSE 53498409 4002169583 stem cell esc 2011-07-12T15:38:06.677 2011-07-12T15:38:06.963 2014-08-27T01:27:32.920 152 GSM758573 SRR307924.bw CSHL_RnaSeq_H1-hESC_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 006WC,005WC,006WC,005WC", "labexpid: LID8664,LID8663,LID8664,LID8663", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 005WC,006WC", "labexpid: LID8663,LID8664", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214606 SRX082580 SRR307925 68890666 68890666 1 TRUE FALSE 62421938 4705387096 stem cell esc 2011-07-12T15:38:06.710 2011-07-12T15:38:06.963 2014-08-27T01:27:33.313 152 GSM758574 SRR307925.bw CSHL_RnaSeq_H1-hESC_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006N", "labexpid: LID8558", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 2", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006N", "labexpid: LID8558", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214607 SRX082581 SRR307926 82283762 82283762 1 TRUE FALSE 78440572 5932414037 liver hepg2 2011-07-12T15:38:06.743 2011-07-12T15:38:06.963 2014-08-27T01:27:33.690 152 GSM758575 SRR307926.bw CSHL_RnaSeq_HepG2_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 014WC,013WC,013WC,014WC", "labexpid: LID16635,LID16636,LID16635,LID16636", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013WC,014WC", "labexpid: LID16635,LID16636", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214607 SRX082581 SRR307927 82323552 82323552 1 TRUE FALSE 78675834 5949238081 liver hepg2 2011-07-12T15:38:06.743 2011-07-12T15:38:06.963 2014-08-27T01:27:33.690 152 GSM758575 SRR307927.bw CSHL_RnaSeq_HepG2_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 014WC,013WC,013WC,014WC", "labexpid: LID16635,LID16636,LID16635,LID16636", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013WC,014WC", "labexpid: LID16635,LID16636", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214608 SRX082582 SRR307928 75893972 75893972 1 TRUE FALSE 72323814 5461040295 liver hepg2 2011-07-12T15:38:06.773 2011-07-12T15:38:06.963 2014-08-27T01:27:34.060 152 GSM758576 SRR307928.bw CSHL_RnaSeq_HepG2_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013C,014C,014C,013C", "labexpid: LID8471,LID8472,LID8471,LID8472", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013C,014C", "labexpid: LID8471,LID8472", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214608 SRX082582 SRR307929 74789340 74789340 1 TRUE FALSE 72592129 5481875298 liver hepg2 2011-07-12T15:38:06.773 2011-07-12T15:38:06.963 2014-08-27T01:27:34.060 152 GSM758576 SRR307929.bw CSHL_RnaSeq_HepG2_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013C,014C,014C,013C", "labexpid: LID8471,LID8472,LID8471,LID8472", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013C,014C", "labexpid: LID8471,LID8472", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214609 SRX082583 SRR307930 65183668 65183668 1 TRUE FALSE 60283402 4504273897 blood k562 2011-07-12T15:38:06.807 2011-07-12T15:38:06.963 2014-08-27T01:27:34.407 152 GSM758577 SRR307930.bw CSHL_RnaSeq_K562_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001WC,001WC,002WC,002WC", "labexpid: LID8659,LID8659,LID8660,LID8660", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001WC,002WC", "labexpid: LID8659,LID8660", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214609 SRX082583 SRR307931 63571542 63571542 1 TRUE FALSE 58435619 4349250760 blood k562 2011-07-12T15:38:06.807 2011-07-12T15:38:06.963 2014-08-27T01:27:34.407 152 GSM758577 SRR307931.bw CSHL_RnaSeq_K562_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001WC,001WC,002WC,002WC", "labexpid: LID8659,LID8659,LID8660,LID8660", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001WC,002WC", "labexpid: LID8659,LID8660", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214610 SRX082584 SRR307932 75827554 75827554 1 TRUE FALSE 73150755 5524675368 muscle hsmm 2011-07-12T15:38:06.840 2011-07-12T15:38:06.963 2014-08-27T01:27:34.833 152 GSM758578 SRR307932.bw CSHL_RnaSeq_HSMM_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 023WC,024WC,024WC,023WC", "labexpid: LID8710,LID8711,LID8710,LID8711", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 023WC,024WC", "labexpid: LID8710,LID8711", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS214610 SRX082584 SRR307933 82283560 82283560 1 TRUE FALSE 79946402 6042867975 muscle hsmm 2011-07-12T15:38:06.840 2011-07-12T15:38:06.963 2014-08-27T01:27:34.833 152 GSM758578 SRR307933.bw CSHL_RnaSeq_HSMM_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 023WC,024WC,024WC,023WC", "labexpid: LID8710,LID8711,LID8710,LID8711", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 023WC,024WC", "labexpid: LID8710,LID8711", "labversion: iIDR", "spikeinpool: NIST14") SRP007461 SRS241949 SRX084664 SRR315297 84071310 84071310 1 TRUE FALSE 79553728 6008321446 blood gm12878 2011-07-21T16:57:05.903 2011-07-21T16:57:07.873 2014-08-27T01:27:35.423 152 GSM765386 SRR315297.bw CSHL_RnaSeq_GM12878_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N,004N,003N,004N", "labexpid: LID8532,LID8532,LID8533,LID8533", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N", "labexpid: LID8532", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241949 SRX084664 SRR315298 77961360 77961360 1 TRUE FALSE 73423832 5543526534 blood gm12878 2011-07-21T16:57:05.903 2011-07-21T16:57:07.873 2014-08-27T01:27:35.423 152 GSM765386 SRR315298.bw CSHL_RnaSeq_GM12878_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N,004N,003N,004N", "labexpid: LID8532,LID8532,LID8533,LID8533", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N", "labexpid: LID8532", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241950 SRX084665 SRR315299 76468544 76468544 1 TRUE FALSE 73247344 5529501265 blood k562 2011-07-21T16:57:05.950 2011-07-21T16:57:07.873 2014-08-27T01:31:15.927 152 GSM765387 SRR315299.bw CSHL_RnaSeq_K562_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001N,002N,001N,002N", "labexpid: LID8556,LID8557,LID8556,LID8557", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001N", "labexpid: LID8556", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241950 SRX084665 SRR315300 71350172 71350172 1 TRUE FALSE 67037348 5052605225 blood k562 2011-07-21T16:57:05.950 2011-07-21T16:57:07.873 2014-08-27T01:31:15.927 152 GSM765387 SRR315300.bw CSHL_RnaSeq_K562_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001N,002N,001N,002N", "labexpid: LID8556,LID8557,LID8556,LID8557", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001N", "labexpid: LID8556", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241951 SRX084666 SRR315301 86351234 86351234 1 TRUE FALSE 83851954 6325831855 breast mcf 2011-07-21T16:57:05.983 2011-07-21T16:57:07.873 2014-08-27T01:31:16.170 152 GSM765388 SRR315301.bw CSHL_RnaSeq_MCF-7_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC,016WC,015WC,016WC", "labexpid: LID8686,LID8687,LID8686,LID8687", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC", "labexpid: LID8686", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241951 SRX084666 SRR315302 88512976 88512976 1 TRUE FALSE 84540796 6381731436 breast mcf 2011-07-21T16:57:05.983 2011-07-21T16:57:07.873 2014-08-27T01:31:16.170 152 GSM765388 SRR315302.bw CSHL_RnaSeq_MCF-7_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC,016WC,015WC,016WC", "labexpid: LID8686,LID8687,LID8686,LID8687", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC", "labexpid: LID8686", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241952 SRX084667 SRR315303 78544908 78544908 1 TRUE FALSE 41264884 3040715408 lung other 2011-07-21T16:57:06.017 2011-07-21T16:57:07.873 2014-08-27T01:31:16.493 152 GSM765389 SRR315303.bw CSHL_RnaSeq_NHLF_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: lung fibroblasts", "cell karyotype: normal", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 033WC,034WC,033WC,034WC", "labexpid: LID8828,LID8829,LID8828,LID8829", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "biorep: 033WC", "labexpid: LID8828", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241952 SRX084667 SRR315304 64585994 64585994 1 TRUE FALSE 32532036 2379790996 lung other 2011-07-21T16:57:06.017 2011-07-21T16:57:07.873 2014-08-27T01:31:16.493 152 GSM765389 SRR315304.bw CSHL_RnaSeq_NHLF_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: lung fibroblasts", "cell karyotype: normal", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 033WC,034WC,033WC,034WC", "labexpid: LID8828,LID8829,LID8828,LID8829", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "biorep: 033WC", "labexpid: LID8828", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241953 SRX084668 SRR315305 89746478 89746478 1 TRUE FALSE 85299138 6422353100 blood k562 2011-07-21T16:57:06.050 2011-07-21T16:57:07.873 2014-08-27T01:31:16.830 152 GSM765390 SRR315305.bw CSHL_RnaSeq_K562_nucleoplasm_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025NP,026NP,025NP,026NP", "labexpid: LID9190,LID9189,LID9190,LID9189", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: That part of the nuclear content other than the chromosomes or the nucleolus", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025NP", "labexpid: LID9189", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241953 SRX084668 SRR315306 80882816 80882816 1 TRUE FALSE 75658110 5694197874 blood k562 2011-07-21T16:57:06.050 2011-07-21T16:57:07.873 2014-08-27T01:31:16.830 152 GSM765390 SRR315306.bw CSHL_RnaSeq_K562_nucleoplasm_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025NP,026NP,025NP,026NP", "labexpid: LID9190,LID9189,LID9190,LID9189", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: That part of the nuclear content other than the chromosomes or the nucleolus", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025NP", "labexpid: LID9189", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241954 SRX084669 SRR315307 85010118 85010118 1 TRUE FALSE 47282092 3375626983 muscle hsmm 2011-07-21T16:57:06.083 2011-07-21T16:57:07.873 2014-08-27T01:31:17.103 148 GSM765391 SRR315307.bw CSHL_RnaSeq_HSMM_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: skeletal muscle myoblasts", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 023WC,024WC,024WC,023WC", "labexpid: LID8826,LID8827,LID8826,LID8827", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 023WC", "labexpid: LID8826", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241954 SRX084669 SRR315308 78437464 78437464 1 TRUE FALSE 46028272 3402181098 muscle hsmm 2011-07-21T16:57:06.083 2011-07-21T16:57:07.873 2014-08-27T01:31:17.103 152 GSM765391 SRR315308.bw CSHL_RnaSeq_HSMM_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: skeletal muscle myoblasts", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 023WC,024WC,024WC,023WC", "labexpid: LID8826,LID8827,LID8826,LID8827", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 023WC", "labexpid: LID8826", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241955 SRX084670 SRR315309 84750392 84750392 1 TRUE FALSE 81932860 6182382505 blood k562 2011-07-21T16:57:06.117 2011-07-21T16:57:07.873 2014-08-27T01:31:17.367 152 GSM765392 SRR315309.bw CSHL_RnaSeq_K562_chromatin_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 026CH,025CH,025CH,026CH", "labexpid: LID9185,LID9186,LID9186,LID9185", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Nuclear DNA and associated proteins", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025CH", "labexpid: LID9185", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241955 SRX084670 SRR315310 86437072 86437072 1 TRUE FALSE 82702380 6229609775 blood k562 2011-07-21T16:57:06.117 2011-07-21T16:57:07.873 2014-08-27T01:31:17.367 152 GSM765392 SRR315310.bw CSHL_RnaSeq_K562_chromatin_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 026CH,025CH,025CH,026CH", "labexpid: LID9185,LID9186,LID9186,LID9185", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Nuclear DNA and associated proteins", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025CH", "labexpid: LID9185", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241956 SRX084671 SRR315311 71867120 71867120 1 TRUE FALSE 68015745 5125727502 blood k562 2011-07-21T16:57:06.150 2011-07-21T16:57:07.873 2014-08-27T01:31:17.597 152 GSM765393 SRR315311.bw CSHL_RnaSeq_K562_nucleolus_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025NL,026NL,026NL,025NL", "labexpid: LID9187,LID9187,LID9188,LID9188", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The part of the nucleus where ribosomal RNA is actively transcribed", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025NL", "labexpid: LID9187", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241956 SRX084671 SRR315312 73886172 73886172 1 TRUE FALSE 69958038 5229642549 blood k562 2011-07-21T16:57:06.150 2011-07-21T16:57:07.873 2014-08-27T01:31:17.597 152 GSM765393 SRR315312.bw CSHL_RnaSeq_K562_nucleolus_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025NL,026NL,026NL,025NL", "labexpid: LID9187,LID9187,LID9188,LID9188", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The part of the nucleus where ribosomal RNA is actively transcribed", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 025NL", "labexpid: LID9187", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241957 SRX084672 SRR315313 87507510 87507510 1 TRUE FALSE 85618742 6472022026 lung other 2011-07-21T16:57:06.187 2011-07-21T16:57:07.873 2014-08-27T01:31:17.870 152 GSM765394 SRR315313.bw CSHL_RnaSeq_NHLF_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: lung fibroblasts", "cell karyotype: normal", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 033WC,034WC,033WC,034WC", "labexpid: LID8701,LID8692,LID8701,LID8692", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "biorep: 033WC", "labexpid: LID8692", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1", "spikeinpool: 14") SRP007461 SRS241957 SRX084672 SRR315314 90536372 90536372 1 TRUE FALSE 86871323 6566059283 lung other 2011-07-21T16:57:06.187 2011-07-21T16:57:07.873 2014-08-27T01:31:17.870 152 GSM765394 SRR315314.bw CSHL_RnaSeq_NHLF_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: lung fibroblasts", "cell karyotype: normal", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 033WC,034WC,033WC,034WC", "labexpid: LID8701,LID8692,LID8701,LID8692", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "biorep: 033WC", "labexpid: LID8692", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1", "spikeinpool: 14") SRP007461 SRS241958 SRX084673 SRR315315 80773644 80773644 1 TRUE FALSE 73032711 5479752304 brain sh 2011-07-21T16:57:06.220 2011-07-21T16:57:07.873 2014-08-27T01:31:18.113 152 GSM765395 SRR315315.bw CSHL_RnaSeq_SK-N-SH_RA_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: neuroblastoma cell line, treatment: differentiated with retinoic acid, (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 020WC,019WC,020WC,019WC", "labexpid: LID8967,LID8968,LID8967,LID8968", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 019WC", "labexpid: LID8967", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241958 SRX084673 SRR315316 77214108 77214108 1 TRUE FALSE 75264854 5681622438 brain sh 2011-07-21T16:57:06.220 2011-07-21T16:57:07.873 2014-08-27T01:31:18.113 152 GSM765395 SRR315316.bw CSHL_RnaSeq_SK-N-SH_RA_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: neuroblastoma cell line, treatment: differentiated with retinoic acid, (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 020WC,019WC,020WC,019WC", "labexpid: LID8967,LID8968,LID8967,LID8968", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 019WC", "labexpid: LID8967", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241959 SRX084674 SRR315318 64319132 64319132 1 TRUE FALSE 57831603 4314033696 lung other 2011-07-21T16:57:06.257 2011-07-21T16:57:07.873 2014-08-27T01:31:18.373 152 GSM765396 SRR315318.bw CSHL_RnaSeq_AG04450_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 017WC,018WC,018WC,017WC", "labexpid: LID9001,LID9002,LID9002,LID9001", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 017WC", "labexpid: LID9001", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241960 SRX084675 SRR315319 67788934 67788934 1 TRUE FALSE 36958319 2712951998 breast other 2011-07-21T16:57:06.287 2011-07-21T16:57:07.873 2014-08-27T01:31:18.747 152 GSM765397 SRR315319.bw CSHL_RnaSeq_HMEC_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: mammary epithelial cells", "cell karyotype: normal", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 036WC", "labexpid: LID8831", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 036WC", "labexpid: LID8831", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241961 SRX084676 SRR315320 62848548 62848548 1 TRUE FALSE 52928712 3969392967 skin other 2011-07-21T16:57:06.320 2011-07-21T16:57:07.873 2014-08-27T01:31:19.380 152 GSM765398 SRR315320.bw CSHL_RnaSeq_NHEK_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 007WC,008WC,007WC,008WC,035WC", "labexpid: LID8665,LID8666,LID8665,LID8666,LID8830", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2,5", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 007WC", "labexpid: LID8665", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241961 SRX084676 SRR315321 58005898 58005898 1 TRUE FALSE 45349697 3391956667 skin other 2011-07-21T16:57:06.320 2011-07-21T16:57:07.873 2014-08-27T01:31:19.380 152 GSM765398 SRR315321.bw CSHL_RnaSeq_NHEK_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 007WC,008WC,007WC,008WC,035WC", "labexpid: LID8665,LID8666,LID8665,LID8666,LID8830", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2,5", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 007WC", "labexpid: LID8665", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241961 SRX084676 SRR315322 63951172 63951172 1 TRUE FALSE 38163773 2557627227 skin other 2011-07-21T16:57:06.320 2011-07-21T16:57:07.873 2014-08-27T01:31:19.380 152 GSM765398 SRR315322.bw CSHL_RnaSeq_NHEK_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 007WC,008WC,007WC,008WC,035WC", "labexpid: LID8665,LID8666,LID8665,LID8666,LID8830", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2,5", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 007WC", "labexpid: LID8665", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241962 SRX084677 SRR315323 60537648 60537648 1 TRUE FALSE 56981884 4298565680 skin other 2011-07-21T16:57:06.353 2011-07-21T16:57:07.873 2014-08-27T01:31:19.673 152 GSM765399 SRR315323.bw CSHL_RnaSeq_NHEK_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 028N,027N,027N,028N", "labexpid: LID8798,LID8797,LID8798,LID8797", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027N", "labexpid: LID8797", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241962 SRX084677 SRR315324 81279966 81279966 1 TRUE FALSE 77246424 5831313370 skin other 2011-07-21T16:57:06.353 2011-07-21T16:57:07.873 2014-08-27T01:31:19.673 152 GSM765399 SRR315324.bw CSHL_RnaSeq_NHEK_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 028N,027N,027N,028N", "labexpid: LID8798,LID8797,LID8798,LID8797", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027N", "labexpid: LID8797", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241963 SRX084678 SRR315325 64124916 64124916 1 TRUE FALSE 60452652 4551471097 skin other 2011-07-21T16:57:06.390 2011-07-21T16:57:07.873 2014-08-27T01:31:19.963 152 GSM765400 SRR315325.bw CSHL_RnaSeq_NHEK_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027C,027C,028C,028C", "labexpid: LID8795,LID8796,LID8795,LID8796", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027C", "labexpid: LID8795", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241963 SRX084678 SRR315326 72980788 72980788 1 TRUE FALSE 69434889 5225419135 skin other 2011-07-21T16:57:06.390 2011-07-21T16:57:07.873 2014-08-27T01:31:19.963 152 GSM765400 SRR315326.bw CSHL_RnaSeq_NHEK_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027C,027C,028C,028C", "labexpid: LID8795,LID8796,LID8795,LID8796", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027C", "labexpid: LID8795", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS241964 SRX084679 SRR315327 92892696 92892696 1 TRUE FALSE 88309761 6677672134 skin other 2011-07-21T16:57:06.423 2011-07-21T16:57:07.873 2014-08-27T01:31:20.253 152 GSM765401 SRR315327.bw CSHL_RnaSeq_NHEK_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC,008WC,007WC,008WC,035WC", "labexpid: LID8694,LID16631,LID16631,LID16632,LID16632", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2,5", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC", "labexpid: LID16631", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241964 SRX084679 SRR315328 89983186 89983186 1 TRUE FALSE 84937035 6416867862 skin other 2011-07-21T16:57:06.423 2011-07-21T16:57:07.873 2014-08-27T01:31:20.253 152 GSM765401 SRR315328.bw CSHL_RnaSeq_NHEK_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC,008WC,007WC,008WC,035WC", "labexpid: LID8694,LID16631,LID16631,LID16632,LID16632", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2,5", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC", "labexpid: LID16631", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241964 SRX084679 SRR315329 89375626 89375626 1 TRUE FALSE 84870292 6417464278 skin other 2011-07-21T16:57:06.423 2011-07-21T16:57:07.873 2014-08-27T01:31:20.253 152 GSM765401 SRR315329.bw CSHL_RnaSeq_NHEK_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC,008WC,007WC,008WC,035WC", "labexpid: LID8694,LID16631,LID16631,LID16632,LID16632", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2,5", "spikeinpool: Nist14", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC", "labexpid: LID16631", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241965 SRX084680 SRR315330 73873700 73873700 1 TRUE FALSE 70157662 5279174061 cervix s3 2011-07-21T16:57:06.457 2011-07-21T16:57:07.873 2014-08-27T01:31:20.580 152 GSM765402 SRR315330.bw CSHL_RnaSeq_HeLa-S3_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011WC,012WC,012WC,011WC", "labexpid: LID16634,LID16633,LID16634,LID16633", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011WC", "labexpid: LID16633", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241965 SRX084680 SRR315331 74892294 74892294 1 TRUE FALSE 71312023 5388552983 cervix s3 2011-07-21T16:57:06.457 2011-07-21T16:57:07.873 2014-08-27T01:31:20.580 152 GSM765402 SRR315331.bw CSHL_RnaSeq_HeLa-S3_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011WC,012WC,012WC,011WC", "labexpid: LID16634,LID16633,LID16634,LID16633", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011WC", "labexpid: LID16633", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241966 SRX084681 SRR315332 49338808 49338808 1 TRUE FALSE 45487951 3420954419 cervix s3 2011-07-21T16:57:06.490 2011-07-21T16:57:07.873 2014-08-27T01:31:20.863 152 GSM765403 SRR315332.bw CSHL_RnaSeq_HeLa-S3_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011N,012N,012N,011N", "labexpid: LID8559,LID8560,LID8559,LID8560", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011N", "labexpid: LID8559", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241966 SRX084681 SRR315333 73024362 73024362 1 TRUE FALSE 68526944 5159291904 cervix s3 2011-07-21T16:57:06.490 2011-07-21T16:57:07.873 2014-08-27T01:31:20.863 152 GSM765403 SRR315333.bw CSHL_RnaSeq_HeLa-S3_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011N,012N,012N,011N", "labexpid: LID8559,LID8560,LID8559,LID8560", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011N", "labexpid: LID8559", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241967 SRX084682 SRR315334 78911382 78911382 1 TRUE FALSE 75082573 5668959831 cervix s3 2011-07-21T16:57:06.520 2011-07-21T16:57:07.873 2014-08-27T01:31:21.110 152 GSM765404 SRR315334.bw CSHL_RnaSeq_HeLa-S3_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011C,012C,011C,012C", "labexpid: LID8470,LID8469,LID8470,LID8469", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011C", "labexpid: LID8469", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241967 SRX084682 SRR315335 67263978 67263978 1 TRUE FALSE 64371050 4859754882 cervix s3 2011-07-21T16:57:06.520 2011-07-21T16:57:07.873 2014-08-27T01:31:21.110 152 GSM765404 SRR315335.bw CSHL_RnaSeq_HeLa-S3_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011C,012C,011C,012C", "labexpid: LID8470,LID8469,LID8470,LID8469", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011C", "labexpid: LID8469", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241968 SRX084683 SRR315336 71499758 71499758 1 TRUE FALSE 65360842 4939118736 blood k562 2011-07-21T16:57:06.557 2011-07-21T16:57:07.873 2014-08-27T01:31:21.453 152 GSM765405 SRR315336.bw CSHL_RnaSeq_K562_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001WC,001WC,002WC,002WC", "labexpid: LID16627,LID16628,LID16628,LID16627", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001WC", "labexpid: LID16627", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS241968 SRX084683 SRR315337 77343408 77343408 1 TRUE FALSE 72678485 5482081492 blood k562 2011-07-21T16:57:06.557 2011-07-21T16:57:07.873 2014-08-27T01:31:21.453 152 GSM765405 SRR315337.bw CSHL_RnaSeq_K562_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001WC,001WC,002WC,002WC", "labexpid: LID16627,LID16628,LID16628,LID16627", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001WC", "labexpid: LID16627", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242499 SRX085288 SRR317035 152045140 152045140 1 TRUE FALSE 146541381 11042372342 cervix s3 2011-07-28T14:47:06.653 2011-07-28T14:47:08.570 2014-08-27T01:31:21.803 152 GSM767838 SRR317035.bw CSHL_RnaSeq_HeLa-S3_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 012C", "labexpid: LID18551", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 012C", "labexpid: LID18551", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 2", "replicate description: tier 2") SRP007461 SRS242500 SRX085289 SRR317036 174684666 174684666 1 TRUE FALSE 169552363 12710196123 blood vessel huvec 2011-07-28T14:47:06.687 2011-07-28T14:47:08.570 2014-08-27T01:31:22.047 152 GSM767839 SRR317036.bw CSHL_RnaSeq_HUVEC_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 029C", "labexpid: LID18556", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 029C", "labexpid: LID18556", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS242501 SRX085290 SRR317037 257412756 257412756 1 TRUE FALSE 248407594 18660052158 liver hepg2 2011-07-28T14:47:06.720 2011-07-28T14:47:08.570 2014-08-27T01:35:34.793 152 GSM767840 SRR317037.bw CSHL_RnaSeq_HepG2_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 014C,013C,014C,013C", "labexpid: LID18552,LID18553,LID18552,LID18553", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 013C", "labexpid: LID18552", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242501 SRX085290 SRR317038 223353786 223353786 1 TRUE FALSE 215333405 16211257153 liver hepg2 2011-07-28T14:47:06.720 2011-07-28T14:47:08.570 2014-08-27T01:35:34.793 152 GSM767840 SRR317038.bw CSHL_RnaSeq_HepG2_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 014C,013C,014C,013C", "labexpid: LID18552,LID18553,LID18552,LID18553", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 013C", "labexpid: LID18552", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242502 SRX085291 SRR317039 186409576 186409576 1 TRUE FALSE 181763575 13728273534 stem cell esc 2011-07-28T14:47:06.753 2011-07-28T14:47:08.570 2014-08-27T01:35:35.477 152 GSM767841 SRR317039.bw CSHL_RnaSeq_H1-hESC_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 006N", "labexpid: LID9199", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 006N", "labexpid: LID9199", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 2", "replicate description: tier 2") SRP007461 SRS242503 SRX085292 SRR317040 121041760 121041760 1 TRUE FALSE 115637999 8692749059 stem cell esc 2011-07-28T14:47:06.787 2011-07-28T14:47:08.570 2014-08-27T01:35:36.050 152 GSM767842 SRR317040.bw CSHL_RnaSeq_H1-hESC_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 006C", "labexpid: LID18549", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 006C", "labexpid: LID18549", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 2", "replicate description: tier 2") SRP007461 SRS242504 SRX085293 SRR317041 130661662 130661662 1 TRUE FALSE 126645363 9547280456 skin other 2011-07-28T14:47:06.820 2011-07-28T14:47:08.570 2014-08-27T01:35:36.613 152 GSM767843 SRR317041.bw CSHL_RnaSeq_NHEK_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 027C", "labexpid: LID18554", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 027C", "labexpid: LID18554", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS242505 SRX085294 SRR317042 228514042 228514042 1 TRUE FALSE 221421040 16714308738 blood k562 2011-07-28T14:47:06.853 2011-07-28T14:47:08.570 2014-08-27T01:35:37.080 152 GSM767844 SRR317042.bw CSHL_RnaSeq_K562_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001N,002N,001N,002N", "labexpid: LID9195,LID9196,LID9195,LID9196", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001N", "labexpid: LID9195", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242505 SRX085294 SRR317043 184487762 184487762 1 TRUE FALSE 178935336 13520307535 blood k562 2011-07-28T14:47:06.853 2011-07-28T14:47:08.570 2014-08-27T01:35:37.080 152 GSM767844 SRR317043.bw CSHL_RnaSeq_K562_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001N,002N,001N,002N", "labexpid: LID9195,LID9196,LID9195,LID9196", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001N", "labexpid: LID9195", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242506 SRX085295 SRR317044 200949204 200949204 1 TRUE FALSE 183930992 13745872650 brain sh 2011-07-28T14:47:06.887 2011-07-28T14:47:08.570 2014-08-27T01:35:37.610 152 GSM767845 SRR317044.bw CSHL_RnaSeq_SK-N-SH_RA_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: neuroblastoma cell line, treatment: differentiated with retinoic acid, (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 020WC,019WC,020WC,019WC", "labexpid: LID9003,LID9011,LID9003,LID9011", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 019WC", "labexpid: LID9003", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242506 SRX085295 SRR317045 212967982 212967982 1 TRUE FALSE 190623209 14239655040 brain sh 2011-07-28T14:47:06.887 2011-07-28T14:47:08.570 2014-08-27T01:35:37.610 152 GSM767845 SRR317045.bw CSHL_RnaSeq_SK-N-SH_RA_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: neuroblastoma cell line, treatment: differentiated with retinoic acid, (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 020WC,019WC,020WC,019WC", "labexpid: LID9003,LID9011,LID9003,LID9011", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 019WC", "labexpid: LID9003", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242507 SRX085296 SRR317046 210493306 210493306 1 TRUE FALSE 201098039 15197480010 skin other 2011-07-28T14:47:06.920 2011-07-28T14:47:08.570 2014-08-27T01:35:38.300 152 GSM767846 SRR317046.bw CSHL_RnaSeq_NHEK_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 028N,027N,027N,028N", "labexpid: LID9205,LID9204,LID9204,LID9205", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 027N", "labexpid: LID9204", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS242507 SRX085296 SRR317047 155370404 155370404 1 TRUE FALSE 146710695 11079816958 skin other 2011-07-28T14:47:06.920 2011-07-28T14:47:08.570 2014-08-27T01:35:38.300 152 GSM767846 SRR317047.bw CSHL_RnaSeq_NHEK_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell sex: F", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 028N,027N,027N,028N", "labexpid: LID9205,LID9204,LID9204,LID9205", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 027N", "labexpid: LID9204", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS242508 SRX085297 SRR317048 141577958 141577958 1 TRUE FALSE 123208057 9101696255 cervix s3 2011-07-28T14:47:06.950 2011-07-28T14:47:08.570 2014-08-27T04:47:20.567 152 GSM767847 SRR317048.bw CSHL_RnaSeq_HeLa-S3_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 011WC,012WC,012WC,011WC", "labexpid: LID8790,LID8791,LID8790,LID8791", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 011WC", "labexpid: LID8790", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242508 SRX085297 SRR317049 216165498 216165498 1 TRUE FALSE 194156337 14253034806 cervix s3 2011-07-28T14:47:06.950 2011-07-28T14:47:08.570 2014-08-27T04:47:20.567 152 GSM767847 SRR317049.bw CSHL_RnaSeq_HeLa-S3_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 011WC,012WC,012WC,011WC", "labexpid: LID8790,LID8791,LID8790,LID8791", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 011WC", "labexpid: LID8790", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242509 SRX085298 SRR317050 209507664 209507664 1 TRUE FALSE 203082939 15322084717 cervix s3 2011-07-28T14:47:06.983 2011-07-28T14:47:08.570 2014-08-27T04:47:20.817 152 GSM767848 SRR317050.bw CSHL_RnaSeq_HeLa-S3_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 011N,012N,012N,011N", "labexpid: LID9200,LID9201,LID9201,LID9200", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 011N", "labexpid: LID9200", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242509 SRX085298 SRR317051 170726852 170726852 1 TRUE FALSE 163208556 12303282446 cervix s3 2011-07-28T14:47:06.983 2011-07-28T14:47:08.570 2014-08-27T04:47:20.817 152 GSM767848 SRR317051.bw CSHL_RnaSeq_HeLa-S3_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell lineage: ectoderm", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 011N,012N,012N,011N", "labexpid: LID9200,LID9201,LID9201,LID9200", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 011N", "labexpid: LID9200", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242510 SRX085299 SRR317052 164127562 164127562 1 TRUE FALSE 158096404 11903721057 blood k562 2011-07-28T14:47:07.017 2011-07-28T14:47:08.570 2014-08-27T04:47:21.107 152 GSM767849 SRR317052.bw CSHL_RnaSeq_K562_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001C,002C,002C,001C", "labexpid: LID18545,LID18545,LID18546,LID18546", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001C", "labexpid: LID18545", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242510 SRX085299 SRR317053 226097472 226097472 1 TRUE FALSE 216493722 16261561623 blood k562 2011-07-28T14:47:07.017 2011-07-28T14:47:08.570 2014-08-27T04:47:21.107 152 GSM767849 SRR317053.bw CSHL_RnaSeq_K562_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001C,002C,002C,001C", "labexpid: LID18545,LID18545,LID18546,LID18546", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 001C", "labexpid: LID18545", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242511 SRX085300 SRR317054 235769824 235769824 1 TRUE FALSE 228996828 17312964007 liver hepg2 2011-07-28T14:47:07.050 2011-07-28T14:47:08.570 2014-08-27T04:47:21.390 152 GSM767850 SRR317054.bw CSHL_RnaSeq_HepG2_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 013N,013N,014N,014N", "labexpid: LID9202,LID9203,LID9203,LID9202", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 013N", "labexpid: LID9202", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242511 SRX085300 SRR317055 259812714 259812714 1 TRUE FALSE 248272048 18744729607 liver hepg2 2011-07-28T14:47:07.050 2011-07-28T14:47:08.570 2014-08-27T04:47:21.390 152 GSM767850 SRR317055.bw CSHL_RnaSeq_HepG2_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: hepatocellular carcinoma", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 013N,013N,014N,014N", "labexpid: LID9202,LID9203,LID9203,LID9202", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 013N", "labexpid: LID9202", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242512 SRX085301 SRR317056 251313450 251313450 1 TRUE FALSE 168341008 12206422348 breast mcf 2011-07-28T14:47:07.083 2011-07-28T14:47:08.570 2014-08-27T04:47:21.637 148 GSM767851 SRR317056.bw CSHL_RnaSeq_MCF-7_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 015WC,016WC,015WC,016WC", "labexpid: LID8824,LID8825,LID8824,LID8825", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 015WC", "labexpid: LID8824", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242512 SRX085301 SRR317057 232600670 232600670 1 TRUE FALSE 146899604 10658639166 breast mcf 2011-07-28T14:47:07.083 2011-07-28T14:47:08.570 2014-08-27T04:47:21.637 148 GSM767851 SRR317057.bw CSHL_RnaSeq_MCF-7_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 015WC,016WC,015WC,016WC", "labexpid: LID8824,LID8825,LID8824,LID8825", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 015WC", "labexpid: LID8824", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242513 SRX085302 SRR317059 211108208 211108208 1 TRUE FALSE 202155463 15230341168 blood gm12878 2011-07-28T14:47:07.117 2011-07-28T14:47:08.570 2014-08-27T04:47:21.890 152 GSM767852 SRR317059.bw CSHL_RnaSeq_GM12878_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 004C,003C,004C,003C", "labexpid: LID18548,LID18547,LID18548,LID18547", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003C", "labexpid: LID18547", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242514 SRX085303 SRR317060 220939582 220939582 1 TRUE FALSE 213073878 16079214465 blood gm12878 2011-07-28T14:47:07.150 2011-07-28T14:47:08.570 2014-08-27T04:47:22.150 152 GSM767853 SRR317060.bw CSHL_RnaSeq_GM12878_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003N,004N,003N,004N", "labexpid: LID9197,LID9198,LID9198,LID9197", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003N", "labexpid: LID9197", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242514 SRX085303 SRR317061 213838502 213838502 1 TRUE FALSE 209293707 15776479964 blood gm12878 2011-07-28T14:47:07.150 2011-07-28T14:47:08.570 2014-08-27T04:47:22.150 152 GSM767853 SRR317061.bw CSHL_RnaSeq_GM12878_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003N,004N,003N,004N", "labexpid: LID9197,LID9198,LID9198,LID9197", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003N", "labexpid: LID9197", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242515 SRX085304 SRR317062 179697668 179697668 1 TRUE FALSE 164494098 12321228425 epithelium a549 2011-07-28T14:47:07.183 2011-07-28T14:47:08.570 2014-08-27T03:46:15.353 152 GSM767854 SRR317062.bw CSHL_RnaSeq_A549_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), \"This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male.\" - ATCC, newly promoted to tier 2: not in 2011 analysis", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 021WC,021WC,022WC,022WC", "labexpid: LID9005,LID9006,LID9006,LID9005", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 021WC", "labexpid: LID9005", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242515 SRX085304 SRR317063 165285008 165285008 1 TRUE FALSE 152360467 11410446532 epithelium a549 2011-07-28T14:47:07.183 2011-07-28T14:47:08.570 2014-08-27T03:46:15.353 152 GSM767854 SRR317063.bw CSHL_RnaSeq_A549_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), \"This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male.\" - ATCC, newly promoted to tier 2: not in 2011 analysis", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 021WC,021WC,022WC,022WC", "labexpid: LID9005,LID9006,LID9006,LID9005", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 021WC", "labexpid: LID9005", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242516 SRX085305 SRR317064 176893202 176893202 1 TRUE FALSE 158162241 11851621388 skin bj 2011-07-28T14:47:07.217 2011-07-28T14:47:08.570 2014-08-27T03:46:15.657 152 GSM767855 SRR317064.bw CSHL_RnaSeq_BJ_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: skin fibroblast, \"The line was established from skin taken from normal foreskin.\" - ATCC. (PMID: 9916803)", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 037WC,038WC,037WC,038WC", "labexpid: LID9007,LID9007,LID9008,LID9008", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 037WC", "labexpid: LID9007", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242516 SRX085305 SRR317065 163033610 163033610 1 TRUE FALSE 144889094 10716494774 skin bj 2011-07-28T14:47:07.217 2011-07-28T14:47:08.570 2014-08-27T03:46:15.657 152 GSM767855 SRR317065.bw CSHL_RnaSeq_BJ_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: skin fibroblast, \"The line was established from skin taken from normal foreskin.\" - ATCC. (PMID: 9916803)", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 037WC,038WC,037WC,038WC", "labexpid: LID9007,LID9007,LID9008,LID9008", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 037WC", "labexpid: LID9007", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242517 SRX085306 SRR317066 208902908 208902908 1 TRUE FALSE 191370897 14255582338 blood vessel huvec 2011-07-28T14:47:07.250 2011-07-28T14:47:08.570 2014-08-27T03:46:16.020 152 GSM767856 SRR317066.bw CSHL_RnaSeq_HUVEC_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 009WC,010WC,009WC,010WC", "labexpid: LID8789,LID8788,LID8788,LID8789", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 009WC", "labexpid: LID8788", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242517 SRX085306 SRR317067 165416514 165416514 1 TRUE FALSE 146742988 10796873430 blood vessel huvec 2011-07-28T14:47:07.250 2011-07-28T14:47:08.570 2014-08-27T03:46:16.020 152 GSM767856 SRR317067.bw CSHL_RnaSeq_HUVEC_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 009WC,010WC,009WC,010WC", "labexpid: LID8789,LID8788,LID8788,LID8789", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 009WC", "labexpid: LID8788", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242518 SRX085307 SRR317068 213394610 213394610 1 TRUE FALSE 207122598 15636275295 blood vessel huvec 2011-07-28T14:47:07.283 2011-07-28T14:47:08.570 2014-08-27T03:46:16.367 152 GSM767857 SRR317068.bw CSHL_RnaSeq_HUVEC_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 030N,029N,030N,029N", "labexpid: LID9207,LID9206,LID9206,LID9207", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 029N", "labexpid: LID9206", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS242518 SRX085307 SRR317069 250003936 250003936 1 TRUE FALSE 241506662 18218155306 blood vessel huvec 2011-07-28T14:47:07.283 2011-07-28T14:47:08.570 2014-08-27T03:46:16.367 152 GSM767857 SRR317069.bw CSHL_RnaSeq_HUVEC_nucleus_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 030N,029N,030N,029N", "labexpid: LID9207,LID9206,LID9206,LID9207", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 029N", "labexpid: LID9206", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 3", "replicate description: tier 3") SRP007461 SRS281641 SRX110317 SRR768413 113805562 113805562 1 TRUE FALSE 106891566 6675828976 blood k562 2011-12-05T14:35:05.293 2011-12-05T14:35:05.810 2014-08-27T04:18:16.743 152 GSM840136 SRR768413.bw CSHL_RnaSeq_K562_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0131WC,gen0132WC", "labexpid: crg-45,crg-53", "replicate: 1,2", "cell karyotype: cancer", "cell lineage: mesoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0131WC", "labexpid: crg-45", "replicate: 1", "replicate description: tier 1") SRP007461 SRS281641 SRX110317 SRR768414 154985934 154985934 1 TRUE FALSE 142863651 9202845455 blood k562 2011-12-05T14:35:05.293 2011-12-05T14:35:05.810 2014-08-27T04:18:16.743 152 GSM840136 SRR768414.bw CSHL_RnaSeq_K562_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0131WC,gen0132WC", "labexpid: crg-45,crg-53", "replicate: 1,2", "cell karyotype: cancer", "cell lineage: mesoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0131WC", "labexpid: crg-45", "replicate: 1", "replicate description: tier 1") SRP007461 SRS281642 SRX110318 SRR387661 249652136 249652136 1 TRUE FALSE 240338436 18131228852 blood k562 2011-12-05T14:35:05.343 2011-12-05T14:35:05.810 2014-08-27T04:18:17.270 152 GSM840137 SRR387661.bw CSHL_RnaSeq_K562_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001C,002C,002C,001C", "labexpid: LID8465,LID8466,LID8466,LID8465", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001C", "labexpid: LID8465", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS281642 SRX110318 SRR387662 176890678 176890678 1 TRUE FALSE 168150633 12679971198 blood k562 2011-12-05T14:35:05.343 2011-12-05T14:35:05.810 2014-08-27T04:18:17.270 152 GSM840137 SRR387662.bw CSHL_RnaSeq_K562_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001C,002C,002C,001C", "labexpid: LID8465,LID8466,LID8466,LID8465", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001C", "labexpid: LID8465", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS281643 SRX110319 SRR768411 159473474 159473474 1 TRUE FALSE 150398939 9776891735 blood gm12878 2011-12-05T14:35:05.373 2011-12-05T14:35:05.810 2014-08-27T04:18:17.820 152 GSM840138 SRR768411.bw CSHL_RnaSeq_GM12878_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0102WC,gen0103WC", "labexpid: crg-12,crg-7", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0102WC", "labexpid: crg-7", "replicate: 1", "replicate description: tier 1") SRP007461 SRS281643 SRX110319 SRR768412 148843028 148843028 1 TRUE FALSE 143368713 10159402322 blood gm12878 2011-12-05T14:35:05.373 2011-12-05T14:35:05.810 2014-08-27T04:18:17.820 152 GSM840138 SRR768412.bw CSHL_RnaSeq_GM12878_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0102WC,gen0103WC", "labexpid: crg-12,crg-7", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0102WC", "labexpid: crg-7", "replicate: 1", "replicate description: tier 1") SRP007461 SRS353537 SRX174312 SRR534289 252511170 252511170 1 TRUE FALSE 246855849 24727733224 lung imr90 2012-08-07T14:05:26.420 2012-08-07T14:05:26.420 2014-08-27T04:23:33.920 202 GSM981243 SRR534289.bw CSHL_RnaSeq_IMR90_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 045WC,045WC,046WC,046WC", "labexpid: LID45238,LID45239,LID45239,LID45238", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 045WC,046WC", "labexpid: LID45238,LID45239", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353537 SRX174312 SRR534290 226870098 226870098 1 TRUE FALSE 222636527 22274400328 lung imr90 2012-08-07T14:05:26.420 2012-08-07T14:05:26.420 2014-08-27T04:23:33.920 202 GSM981243 SRR534290.bw CSHL_RnaSeq_IMR90_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 045WC,045WC,046WC,046WC", "labexpid: LID45238,LID45239,LID45239,LID45238", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 045WC,046WC", "labexpid: LID45238,LID45239", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353538 SRX174313 SRR534291 228012118 228012118 1 TRUE FALSE 219837865 22070166881 lung imr90 2012-08-07T14:05:27.850 2012-08-07T14:05:27.850 2014-08-27T04:23:34.190 202 GSM981244 SRR534291.bw CSHL_RnaSeq_IMR90_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 045C,046C,046C,046C,045C,045C", "labexpid: LID45612,LID45611,LID45612,LID45612,LID45611,LID45611", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 045C,046C", "labexpid: LID45611,LID45612", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353538 SRX174313 SRR534292 288567620 288567620 1 TRUE FALSE 282756330 28381207375 lung imr90 2012-08-07T14:05:27.850 2012-08-07T14:05:27.850 2014-08-27T04:23:34.190 202 GSM981244 SRR534292.bw CSHL_RnaSeq_IMR90_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 045C,046C,046C,046C,045C,045C", "labexpid: LID45612,LID45611,LID45612,LID45612,LID45611,LID45611", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 045C,046C", "labexpid: LID45611,LID45612", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353539 SRX174314 SRR534293 296875592 296875592 1 TRUE FALSE 282667506 27818522544 breast mcf 2012-08-07T14:05:27.970 2012-08-07T14:05:27.970 2014-08-27T04:23:34.467 202 GSM981245 SRR534293.bw CSHL_RnaSeq_MCF-7_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 090N,089N,090N,089N,090N,089N", "labexpid: LID46860,LID46859,LID46859,LID46860,LID46859,LID46860", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 089N,090N", "labexpid: LID46859,LID46860", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353539 SRX174314 SRR534294 283454234 283454234 1 TRUE FALSE 268848772 26545866353 breast mcf 2012-08-07T14:05:27.970 2012-08-07T14:05:27.970 2014-08-27T04:23:34.467 202 GSM981245 SRR534294.bw CSHL_RnaSeq_MCF-7_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 090N,089N,090N,089N,090N,089N", "labexpid: LID46860,LID46859,LID46859,LID46860,LID46859,LID46860", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 089N,090N", "labexpid: LID46859,LID46860", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353540 SRX174315 SRR534295 277066332 277066332 1 TRUE FALSE 268936927 26980944395 epithelium a549 2012-08-07T14:05:28.133 2012-08-07T14:05:28.133 2014-08-27T04:23:34.717 202 GSM981246 SRR534295.bw CSHL_RnaSeq_A549_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 087C,087C,088C,088C", "labexpid: LID45898,LID45897,LID45897,LID45898", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 087C,088C", "labexpid: LID45897,LID45898", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353540 SRX174315 SRR534296 308051830 308051830 1 TRUE FALSE 299888639 30102968033 epithelium a549 2012-08-07T14:05:28.133 2012-08-07T14:05:28.133 2014-08-27T04:23:34.717 202 GSM981246 SRR534296.bw CSHL_RnaSeq_A549_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 087C,087C,088C,088C", "labexpid: LID45898,LID45897,LID45897,LID45898", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 087C,088C", "labexpid: LID45897,LID45898", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353541 SRX174316 SRR534297 369003398 369003398 1 TRUE FALSE 360999062 36243070285 epithelium a549 2012-08-07T14:05:28.320 2012-08-07T14:05:28.320 2014-08-27T04:23:35.037 202 GSM981247 SRR534297.bw CSHL_RnaSeq_A549_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 088N,087N,087N,088N,088N,087N", "labexpid: LID45900,LID45899,LID45899,LID45899,LID45900,LID45900", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 087N,088N", "labexpid: LID45899,LID45900", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353541 SRX174316 SRR534298 203728410 203728410 1 TRUE FALSE 195948631 19671208967 epithelium a549 2012-08-07T14:05:28.320 2012-08-07T14:05:28.320 2014-08-27T04:23:35.037 202 GSM981247 SRR534298.bw CSHL_RnaSeq_A549_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 088N,087N,087N,088N,088N,087N", "labexpid: LID45900,LID45899,LID45899,LID45899,LID45900,LID45900", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 087N,088N", "labexpid: LID45899,LID45900", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353542 SRX174317 SRR534299 335493454 335493454 1 TRUE FALSE 330114850 33144054269 lung imr90 2012-08-07T14:05:28.407 2012-08-07T14:05:28.407 2014-08-27T04:23:35.487 202 GSM981248 SRR534299.bw CSHL_RnaSeq_IMR90_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 046N,045N,045N,046N,045N,046N", "labexpid: LID45613,LID45635,LID45613,LID45635,LID45613,LID45635", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 046N,045N", "labexpid: LID45635,LID45613", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353542 SRX174317 SRR534300 342011736 342011736 1 TRUE FALSE 334658579 33578039912 lung imr90 2012-08-07T14:05:28.407 2012-08-07T14:05:28.407 2014-08-27T04:23:35.487 202 GSM981248 SRR534300.bw CSHL_RnaSeq_IMR90_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 046N,045N,045N,046N,045N,046N", "labexpid: LID45613,LID45635,LID45613,LID45635,LID45613,LID45635", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 046N,045N", "labexpid: LID45635,LID45613", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353543 SRX174318 SRR534301 217498662 217498662 1 TRUE FALSE 209491815 20999836438 lung imr90 2012-08-07T14:05:28.493 2012-08-07T14:05:28.493 2014-08-27T04:23:35.927 202 GSM981249 SRR534301.bw CSHL_RnaSeq_IMR90_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 046WC,045WC,045WC,045WC,046WC,046WC", "labexpid: LID45017,LID45016,LID45017,LID45016,LID45017,LID45016", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 045WC,046WC", "labexpid: LID45016,LID45017", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353543 SRX174318 SRR534302 147371454 147371454 1 TRUE FALSE 142532486 14282215735 lung imr90 2012-08-07T14:05:28.493 2012-08-07T14:05:28.493 2014-08-27T04:23:35.927 202 GSM981249 SRR534302.bw CSHL_RnaSeq_IMR90_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 046WC,045WC,045WC,045WC,046WC,046WC", "labexpid: LID45017,LID45016,LID45017,LID45016,LID45017,LID45016", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 045WC,046WC", "labexpid: LID45016,LID45017", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353544 SRX174319 SRR534303 299318672 299318672 1 TRUE FALSE 279064214 27976974509 brain sk 2012-08-07T14:05:28.570 2012-08-07T14:05:28.570 2014-08-27T04:23:36.210 202 GSM981250 SRR534303.bw CSHL_RnaSeq_SK-N-SH_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 086N,085N,086N,085N,085N,086N", "labexpid: LID46597,LID46596,LID46597,LID46596,LID46597,LID46596", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 085N,086N", "labexpid: LID46596,LID46597", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353544 SRX174319 SRR534304 486907006 486907006 1 TRUE FALSE 472888645 47455084858 brain sk 2012-08-07T14:05:28.570 2012-08-07T14:05:28.570 2014-08-27T04:23:36.210 202 GSM981250 SRR534304.bw CSHL_RnaSeq_SK-N-SH_nucleus_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 086N,085N,086N,085N,085N,086N", "labexpid: LID46597,LID46596,LID46597,LID46596,LID46597,LID46596", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 085N,086N", "labexpid: LID46596,LID46597", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353545 SRX174320 SRR534305 482246048 482246048 1 TRUE FALSE 459921975 46138633573 brain sk 2012-08-07T14:05:28.683 2012-08-07T14:05:28.683 2014-08-27T04:23:36.650 202 GSM981251 SRR534305.bw CSHL_RnaSeq_SK-N-SH_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 085C,086C,085C,086C", "labexpid: LID46594,LID46595,LID46595,LID46594", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 085C,086C", "labexpid: LID46594,LID46595", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353545 SRX174320 SRR534306 461945138 461945138 1 TRUE FALSE 431448168 43296894655 brain sk 2012-08-07T14:05:28.683 2012-08-07T14:05:28.683 2014-08-27T04:23:36.650 202 GSM981251 SRR534306.bw CSHL_RnaSeq_SK-N-SH_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 085C,086C,085C,086C", "labexpid: LID46594,LID46595,LID46595,LID46594", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 085C,086C", "labexpid: LID46594,LID46595", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353546 SRX174321 SRR534307 329691664 329691664 1 TRUE FALSE 309705383 30653207492 breast mcf 2012-08-07T14:05:28.767 2012-08-07T14:05:28.767 2014-08-27T04:23:36.983 202 GSM981252 SRR534307.bw CSHL_RnaSeq_MCF-7_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 089C,090C,089C,090C", "labexpid: LID46857,LID46858,LID46857,LID46858", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 089C,090C", "labexpid: LID46857,LID46858", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353546 SRX174321 SRR534308 314835744 314835744 1 TRUE FALSE 296961828 29463477853 breast mcf 2012-08-07T14:05:28.767 2012-08-07T14:05:28.767 2014-08-27T04:23:36.983 202 GSM981252 SRR534308.bw CSHL_RnaSeq_MCF-7_cytosol_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 089C,090C,089C,090C", "labexpid: LID46857,LID46858,LID46857,LID46858", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 089C,090C", "labexpid: LID46857,LID46858", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353547 SRX174322 SRR534309 280724734 280724734 1 TRUE FALSE 268153909 26913727567 brain sh 2012-08-07T14:05:28.850 2012-08-07T14:05:28.850 2014-08-27T04:23:37.253 202 GSM981253 SRR534309.bw CSHL_RnaSeq_SK-N-SH_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 086WC,085WC,086WC,085WC,086WC,085WC", "labexpid: LID46599,LID46598,LID46598,LID46599,LID46599,LID46598", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 085WC,086WC", "labexpid: LID46598,LID46599", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353547 SRX174322 SRR534310 199391542 199391542 1 TRUE FALSE 192718464 19315861893 brain sk 2012-08-07T14:05:28.850 2012-08-07T14:05:28.850 2014-08-27T04:23:37.253 202 GSM981253 SRR534310.bw CSHL_RnaSeq_SK-N-SH_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 086WC,085WC,086WC,085WC,086WC,085WC", "labexpid: LID46599,LID46598,LID46598,LID46599,LID46599,LID46598", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 085WC,086WC", "labexpid: LID46598,LID46599", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353548 SRX174323 SRR534311 55989666 55989666 1 TRUE FALSE 46193345 3489078353 blood other 2012-08-07T14:05:28.937 2012-08-07T14:05:28.937 2014-08-27T04:23:37.520 152 GSM981254 SRR534311.bw CSHL_RnaSeq_CD20+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44659,LID44659,LID44660,LID44660,LID44660,LID44659", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44659,LID44660", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353548 SRX174323 SRR534312 56293772 56293772 1 TRUE FALSE 46388438 3503406619 blood other 2012-08-07T14:05:28.937 2012-08-07T14:05:28.937 2014-08-27T04:23:37.520 152 GSM981254 SRR534312.bw CSHL_RnaSeq_CD20+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44659,LID44659,LID44660,LID44660,LID44660,LID44659", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44659,LID44660", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353548 SRX174323 SRR534313 57527554 57527554 1 TRUE FALSE 47427393 3581606886 blood other 2012-08-07T14:05:28.937 2012-08-07T14:05:28.937 2014-08-27T04:23:37.520 152 GSM981254 SRR534313.bw CSHL_RnaSeq_CD20+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44659,LID44659,LID44660,LID44660,LID44660,LID44659", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44659,LID44660", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353548 SRX174323 SRR534314 47113344 47113344 1 TRUE FALSE 29017401 2188364692 blood other 2012-08-07T14:05:28.937 2012-08-07T14:05:28.937 2014-08-27T04:23:37.520 152 GSM981254 SRR534314.bw CSHL_RnaSeq_CD20+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44659,LID44659,LID44660,LID44660,LID44660,LID44659", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44659,LID44660", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353548 SRX174323 SRR534315 48092938 48092938 1 TRUE FALSE 29644470 2235817220 blood other 2012-08-07T14:05:28.937 2012-08-07T14:05:28.937 2014-08-27T04:23:37.520 152 GSM981254 SRR534315.bw CSHL_RnaSeq_CD20+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44659,LID44659,LID44660,LID44660,LID44660,LID44659", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44659,LID44660", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353548 SRX174323 SRR534316 47614476 47614476 1 TRUE FALSE 29330653 2209836024 blood other 2012-08-07T14:05:28.937 2012-08-07T14:05:28.937 2014-08-27T04:23:37.520 152 GSM981254 SRR534316.bw CSHL_RnaSeq_CD20+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44659,LID44659,LID44660,LID44660,LID44660,LID44659", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44659,LID44660", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353549 SRX174324 SRR534317 258192768 258192768 1 TRUE FALSE 251201566 25028109624 placenta leukemia 2012-08-07T14:05:29.087 2012-08-07T14:05:29.087 2014-08-27T04:27:54.087 202 GSM981255 SRR534317.bw CSHL_RnaSeq_HPC-PL_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 071WC,072WC,072WC,071WC,072WC,071WC", "labexpid: LID47301,LID47104,LID47104,LID47301,LID47301,LID47104", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 071WC,072WC", "labexpid: LID47301,LID47104", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS353549 SRX174324 SRR534318 334948882 334948882 1 TRUE FALSE 328599173 32982872858 placenta leukemia 2012-08-07T14:05:29.087 2012-08-07T14:05:29.087 2014-08-27T04:27:54.087 202 GSM981255 SRR534318.bw CSHL_RnaSeq_HPC-PL_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 071WC,072WC,072WC,071WC,072WC,071WC", "labexpid: LID47301,LID47104,LID47104,LID47301,LID47301,LID47104", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 071WC,072WC", "labexpid: LID47301,LID47104", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS353550 SRX174325 SRR534319 50092730 50092730 1 TRUE FALSE 45043185 3391035930 blood other 2012-08-07T14:05:29.267 2012-08-07T14:05:29.267 2014-08-27T04:27:54.767 152 GSM981256 SRR534319.bw CSHL_RnaSeq_CD20+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44499,LID44498,LID44499,LID44498,LID44499,LID44498", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44498,LID44499", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353550 SRX174325 SRR534320 51510856 51510856 1 TRUE FALSE 46238693 3477783796 blood other 2012-08-07T14:05:29.267 2012-08-07T14:05:29.267 2014-08-27T04:27:54.767 152 GSM981256 SRR534320.bw CSHL_RnaSeq_CD20+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44499,LID44498,LID44499,LID44498,LID44499,LID44498", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44498,LID44499", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353550 SRX174325 SRR534321 51574172 51574172 1 TRUE FALSE 46248869 3468755904 blood other 2012-08-07T14:05:29.267 2012-08-07T14:05:29.267 2014-08-27T04:27:54.767 152 GSM981256 SRR534321.bw CSHL_RnaSeq_CD20+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44499,LID44498,LID44499,LID44498,LID44499,LID44498", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44498,LID44499", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353550 SRX174325 SRR534322 60491218 60491218 1 TRUE FALSE 53859022 4058185090 blood other 2012-08-07T14:05:29.267 2012-08-07T14:05:29.267 2014-08-27T04:27:54.767 152 GSM981256 SRR534322.bw CSHL_RnaSeq_CD20+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44499,LID44498,LID44499,LID44498,LID44499,LID44498", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44498,LID44499", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353550 SRX174325 SRR534323 62697638 62697638 1 TRUE FALSE 55852245 4208964776 blood other 2012-08-07T14:05:29.267 2012-08-07T14:05:29.267 2014-08-27T04:27:54.767 152 GSM981256 SRR534323.bw CSHL_RnaSeq_CD20+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44499,LID44498,LID44499,LID44498,LID44499,LID44498", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44498,LID44499", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353550 SRX174325 SRR534324 62956280 62956280 1 TRUE FALSE 56077726 4226323338 blood other 2012-08-07T14:05:29.267 2012-08-07T14:05:29.267 2014-08-27T04:27:54.767 152 GSM981256 SRR534324.bw CSHL_RnaSeq_CD20+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 042WC,041WC,042WC,041WC,042WC,041WC", "labexpid: LID44499,LID44498,LID44499,LID44498,LID44499,LID44498", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 041WC,042WC", "labexpid: LID44498,LID44499", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353551 SRX174326 SRR534325 472551428 472551428 1 TRUE FALSE 453425240 45355132619 blood cd34 2012-08-07T14:05:29.327 2012-08-07T14:05:29.327 2014-08-27T04:27:55.647 202 GSM981257 SRR534325.bw CSHL_RnaSeq_CD34+_Mobilized_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 043WC", "labexpid: LID45901", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist14", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 043WC", "labexpid: LID45901", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353552 SRX174327 SRR534326 327708614 327708614 1 TRUE FALSE 316849731 31794373471 skin other 2012-08-07T14:05:29.437 2012-08-07T14:05:29.437 2014-08-27T03:38:14.120 202 GSM981258 SRR534326.bw CSHL_RnaSeq_HFDPC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 061WC,062WC,062WC,061WC", "labexpid: LID47094,LID47095,LID47095,LID47094", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 062WC", "labexpid: LID47095", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS353552 SRX174327 SRR534327 237149788 237149788 1 TRUE FALSE 232305390 23316067554 skin other 2012-08-07T14:05:29.437 2012-08-07T14:05:29.437 2014-08-27T03:38:14.120 202 GSM981258 SRR534327.bw CSHL_RnaSeq_HFDPC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 061WC,062WC,062WC,061WC", "labexpid: LID47094,LID47095,LID47095,LID47094", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 062WC", "labexpid: LID47095", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS353553 SRX174328 SRR534328 60304274 60304274 1 TRUE FALSE 41512221 3132239091 monocytes cd14 2012-08-07T14:05:29.587 2012-08-07T14:05:29.587 2014-08-27T03:38:14.403 152 GSM981259 SRR534328.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44658,LID44658,LID44657,LID44657,LID44658,LID44657", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44657,LID44658", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353553 SRX174328 SRR534329 63422170 63422170 1 TRUE FALSE 43608757 3288437867 monocytes cd14 2012-08-07T14:05:29.587 2012-08-07T14:05:29.587 2014-08-27T03:38:14.403 152 GSM981259 SRR534329.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44658,LID44658,LID44657,LID44657,LID44658,LID44657", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44657,LID44658", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353553 SRX174328 SRR534330 64116260 64116260 1 TRUE FALSE 44013903 3318282295 monocytes cd14 2012-08-07T14:05:29.587 2012-08-07T14:05:29.587 2014-08-27T03:38:14.403 152 GSM981259 SRR534330.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44658,LID44658,LID44657,LID44657,LID44658,LID44657", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44657,LID44658", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353553 SRX174328 SRR534331 60024606 60024606 1 TRUE FALSE 44183529 3332042059 monocytes cd14 2012-08-07T14:05:29.587 2012-08-07T14:05:29.587 2014-08-27T03:38:14.403 152 GSM981259 SRR534331.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44658,LID44658,LID44657,LID44657,LID44658,LID44657", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44657,LID44658", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353553 SRX174328 SRR534332 60236144 60236144 1 TRUE FALSE 44340156 3345018659 monocytes cd14 2012-08-07T14:05:29.587 2012-08-07T14:05:29.587 2014-08-27T03:38:14.403 152 GSM981259 SRR534332.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44658,LID44658,LID44657,LID44657,LID44658,LID44657", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44657,LID44658", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353553 SRX174328 SRR534333 60101108 60101108 1 TRUE FALSE 44273236 3340187683 monocytes cd14 2012-08-07T14:05:29.587 2012-08-07T14:05:29.587 2014-08-27T03:38:14.403 152 GSM981259 SRR534333.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44658,LID44658,LID44657,LID44657,LID44658,LID44657", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44657,LID44658", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS353554 SRX174329 SRR534334 234515542 234515542 1 TRUE FALSE 231076153 23195406704 epithelium other 2012-08-07T14:05:29.680 2012-08-07T14:05:29.680 2014-08-27T04:27:56.297 202 GSM981260 SRR534334.bw CSHL_RnaSeq_hMSC-AT_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 065WC,065WC,066WC,066WC", "labexpid: LID47097,LID47098,LID47098,LID47097", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 065WC", "labexpid: LID47097", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS353554 SRX174329 SRR534335 315161234 315161234 1 TRUE FALSE 309043619 31016923285 epithelium other 2012-08-07T14:05:29.680 2012-08-07T14:05:29.680 2014-08-27T04:27:56.297 202 GSM981260 SRR534335.bw CSHL_RnaSeq_hMSC-AT_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 065WC,065WC,066WC,066WC", "labexpid: LID47097,LID47098,LID47098,LID47097", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 065WC", "labexpid: LID47097", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS358717 SRX179429 SRR545685 289570394 289570394 1 TRUE FALSE 283030891 28394445782 placenta other 2012-08-20T13:05:15.880 2012-08-20T13:05:15.880 2014-08-27T04:27:57.637 202 GSM984604 SRR545685.bw CSHL_RnaSeq_HPIEpC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 073WC,074WC,073WC,074WC", "labexpid: LID47253,LID47105,LID47253,LID47105", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 073WC,074WC", "labexpid: LID47105,LID47253", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS358717 SRX179429 SRR545686 339961026 339961026 1 TRUE FALSE 320321915 32147842328 placenta other 2012-08-20T13:05:15.880 2012-08-20T13:05:15.880 2014-08-27T04:27:57.637 202 GSM984604 SRR545686.bw CSHL_RnaSeq_HPIEpC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 073WC,074WC,073WC,074WC", "labexpid: LID47253,LID47105,LID47253,LID47105", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 073WC,074WC", "labexpid: LID47105,LID47253", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS358718 SRX179430 SRR545687 412790398 412790398 1 TRUE FALSE 404960656 40560984292 blood gm12878 2012-08-20T13:05:16.753 2012-08-20T13:05:16.753 2014-08-27T04:27:58.143 202 GSM984605 SRR545687.bw CSHL_RnaSeq_GM12878_nucleolus_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 091NL,092NL,091NL,092NL", "labexpid: LID47963,LID47964,LID47964,LID47963", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist13", "localization description: The part of the nucleus where ribosomal RNA is actively transcribed", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 091NL,092NL", "labexpid: LID47963,LID47964", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS358718 SRX179430 SRR545688 340330396 340330396 1 TRUE FALSE 329023989 32911509712 blood gm12878 2012-08-20T13:05:16.753 2012-08-20T13:05:16.753 2014-08-27T04:27:58.143 202 GSM984605 SRR545688.bw CSHL_RnaSeq_GM12878_nucleolus_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 091NL,092NL,091NL,092NL", "labexpid: LID47963,LID47964,LID47964,LID47963", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 3,4", "spikeinpool: Nist13", "localization description: The part of the nucleus where ribosomal RNA is actively transcribed", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 091NL,092NL", "labexpid: LID47963,LID47964", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS358719 SRX179431 SRR545689 55019744 55019744 1 TRUE FALSE 51818139 5135644993 blood pb 2012-08-20T13:05:16.960 2012-08-20T13:05:16.960 2014-08-27T04:27:58.633 202 GSM984606 SRR545689.bw CSHL_RnaSeq_hMNC-PB_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 077WC", "labexpid: LID47807", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 077WC", "labexpid: LID47807", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS358719 SRX179431 SRR545690 418046226 418046226 1 TRUE FALSE 404697761 40375545643 blood pb 2012-08-20T13:05:16.960 2012-08-20T13:05:16.960 2014-08-27T04:27:58.633 202 GSM984606 SRR545690.bw CSHL_RnaSeq_hMNC-PB_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 077WC", "labexpid: LID47807", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 077WC", "labexpid: LID47807", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS358720 SRX179432 SRR545691 252975416 252975416 1 TRUE FALSE 250407321 25149930961 umbilical cord other 2012-08-20T13:05:17.123 2012-08-20T13:05:17.123 2014-08-27T04:27:59.480 202 GSM984607 SRR545691.bw CSHL_RnaSeq_hMSC-UC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 069WC,069WC,070WC,070WC", "labexpid: LID47299,LID47300,LID47300,LID47299", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 069WC", "labexpid: LID47299", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS358720 SRX179432 SRR545692 221943840 221943840 1 TRUE FALSE 214506820 21546077661 umbilical cord other 2012-08-20T13:05:17.123 2012-08-20T13:05:17.123 2014-08-27T04:27:59.480 202 GSM984607 SRR545692.bw CSHL_RnaSeq_hMSC-UC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 069WC,069WC,070WC,070WC", "labexpid: LID47299,LID47300,LID47300,LID47299", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 069WC", "labexpid: LID47299", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS358721 SRX179433 SRR545693 379382210 379382210 1 TRUE FALSE 375688633 37703216736 bone other 2012-08-20T13:05:17.303 2012-08-20T13:05:17.303 2014-08-27T04:28:00.087 202 GSM984608 SRR545693.bw CSHL_RnaSeq_hMSC-BM_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 067WC,068WC,068WC,067WC", "labexpid: LID47100,LID47099,LID47099,LID47100", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 068WC", "labexpid: LID47100", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358721 SRX179433 SRR545694 347988570 347988570 1 TRUE FALSE 343579850 34479937469 bone other 2012-08-20T13:05:17.303 2012-08-20T13:05:17.303 2014-08-27T04:28:00.087 202 GSM984608 SRR545694.bw CSHL_RnaSeq_hMSC-BM_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 067WC,068WC,068WC,067WC", "labexpid: LID47100,LID47099,LID47099,LID47100", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 068WC", "labexpid: LID47100", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358722 SRX179434 SRR545695 79318776 79318776 1 TRUE FALSE 71265059 5367697111 monocytes cd14 2012-08-20T13:05:17.397 2012-08-20T13:05:17.397 2014-08-27T04:28:00.790 152 GSM984609 SRR545695.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44497,LID44594,LID44594,LID44594,LID44497,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44594,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS358722 SRX179434 SRR545696 77263624 77263624 1 TRUE FALSE 69424582 5229857972 monocytes cd14 2012-08-20T13:05:17.397 2012-08-20T13:05:17.397 2014-08-27T04:28:00.790 152 GSM984609 SRR545696.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44497,LID44594,LID44594,LID44594,LID44497,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44594,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS358722 SRX179434 SRR545697 81658088 81658088 1 TRUE FALSE 73475757 5536683178 monocytes cd14 2012-08-20T13:05:17.397 2012-08-20T13:05:17.397 2014-08-27T04:28:00.790 152 GSM984609 SRR545697.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44497,LID44594,LID44594,LID44594,LID44497,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44594,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS358722 SRX179434 SRR545698 55003070 55003070 1 TRUE FALSE 49923500 3763675337 monocytes cd14 2012-08-20T13:05:17.397 2012-08-20T13:05:17.397 2014-08-27T04:28:00.790 152 GSM984609 SRR545698.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44497,LID44594,LID44594,LID44594,LID44497,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44594,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS358722 SRX179434 SRR545699 55199526 55199526 1 TRUE FALSE 50466459 3807811708 monocytes cd14 2012-08-20T13:05:17.397 2012-08-20T13:05:17.397 2014-08-27T04:28:00.790 152 GSM984609 SRR545699.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44497,LID44594,LID44594,LID44594,LID44497,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44594,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS358722 SRX179434 SRR545700 57543712 57543712 1 TRUE FALSE 52596585 3968705049 monocytes cd14 2012-08-20T13:05:17.397 2012-08-20T13:05:17.397 2014-08-27T04:28:00.790 152 GSM984609 SRR545700.bw CSHL_RnaSeq_Monocytes-CD14+_cell_longPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC,040WC,039WC,039WC,040WC", "labexpid: LID44497,LID44594,LID44594,LID44594,LID44497,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 039WC,040WC", "labexpid: LID44594,LID44497", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "spikeinpool: Nist14") SRP007461 SRS358723 SRX179435 SRR545701 391603658 391603658 1 TRUE FALSE 378100371 37927237668 bone other 2012-08-20T13:05:17.530 2012-08-20T13:05:17.530 2014-08-27T04:28:01.353 202 GSM984610 SRR545701.bw CSHL_RnaSeq_HOB_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 053WC,054WC,054WC,053WC", "labexpid: LID47251,LID47252,LID47251,LID47252", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 054WC", "labexpid: LID47252", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358723 SRX179435 SRR545702 414628034 414628034 1 TRUE FALSE 396526133 39763524494 bone other 2012-08-20T13:05:17.530 2012-08-20T13:05:17.530 2014-08-27T04:28:01.353 202 GSM984610 SRR545702.bw CSHL_RnaSeq_HOB_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 053WC,054WC,054WC,053WC", "labexpid: LID47251,LID47252,LID47251,LID47252", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 054WC", "labexpid: LID47252", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358724 SRX179436 SRR545703 428839828 428839828 1 TRUE FALSE 419512200 42089969242 epithelium other 2012-08-20T13:05:17.637 2012-08-20T13:05:17.637 2014-08-27T04:28:01.997 202 GSM984611 SRR545703.bw CSHL_RnaSeq_HCH_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 059WC,060WC,059WC,059WC,060WC,060WC", "labexpid: LID47024,LID47025,LID47024,LID47025,LID47025,LID47024", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 059WC", "labexpid: LID47024", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS358724 SRX179436 SRR545704 359614676 359614676 1 TRUE FALSE 354291367 35551752948 epithelium other 2012-08-20T13:05:17.637 2012-08-20T13:05:17.637 2014-08-27T04:28:01.997 202 GSM984611 SRR545704.bw CSHL_RnaSeq_HCH_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 059WC,060WC,059WC,059WC,060WC,060WC", "labexpid: LID47024,LID47025,LID47024,LID47025,LID47025,LID47024", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 059WC", "labexpid: LID47024", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS358725 SRX179437 SRR545705 364830572 364830572 1 TRUE FALSE 349381804 35024026517 skin other 2012-08-20T13:05:17.823 2012-08-20T13:05:17.823 2014-08-27T04:28:02.573 202 GSM984612 SRR545705.bw CSHL_RnaSeq_NHDF_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 050WC,050WC,049WC,049WC,050WC,049WC", "labexpid: LID47247,LID47248,LID47247,LID47247,LID47248,LID47248", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 050WC", "labexpid: LID47248", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358725 SRX179437 SRR545706 369851756 369851756 1 TRUE FALSE 356988667 35820545607 skin other 2012-08-20T13:05:17.823 2012-08-20T13:05:17.823 2014-08-27T04:28:02.573 202 GSM984612 SRR545706.bw CSHL_RnaSeq_NHDF_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 050WC,050WC,049WC,049WC,050WC,049WC", "labexpid: LID47247,LID47248,LID47247,LID47247,LID47248,LID47248", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 050WC", "labexpid: LID47248", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358726 SRX179438 SRR545707 265587610 265587610 1 TRUE FALSE 255648038 25647441253 blood vessel other 2012-08-20T13:05:17.920 2012-08-20T13:05:17.920 2014-08-27T04:28:03.620 202 GSM984613 SRR545707.bw CSHL_RnaSeq_HSaVEC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 094WC,093WC,094WC,093WC,093WC,094WC", "labexpid: LID47260,LID47261,LID47260,LID47261,LID47261,LID47260", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 094WC,093WC", "labexpid: LID47261,LID47260", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS358726 SRX179438 SRR545708 245247362 245247362 1 TRUE FALSE 239951395 24096058679 blood vessel other 2012-08-20T13:05:17.920 2012-08-20T13:05:17.920 2014-08-27T04:28:03.620 202 GSM984613 SRR545708.bw CSHL_RnaSeq_HSaVEC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 094WC,093WC,094WC,093WC,093WC,094WC", "labexpid: LID47260,LID47261,LID47260,LID47261,LID47261,LID47260", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 094WC,093WC", "labexpid: LID47261,LID47260", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS358727 SRX179439 SRR545709 381804750 381804750 1 TRUE FALSE 371197204 37274168622 blood vessel other 2012-08-20T13:05:18.007 2012-08-20T13:05:18.007 2014-08-27T04:31:53.417 202 GSM984614 SRR545709.bw CSHL_RnaSeq_HAoAF_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 056WC,056WC,055WC,055WC", "labexpid: LID47021,LID47020,LID47020,LID47021", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 056WC", "labexpid: LID47021", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358727 SRX179439 SRR545710 432392262 432392262 1 TRUE FALSE 287197207 27714239068 blood vessel other 2012-08-20T13:05:18.007 2012-08-20T13:05:18.007 2014-08-27T04:31:53.417 202 GSM984614 SRR545710.bw CSHL_RnaSeq_HAoAF_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 056WC,056WC,055WC,055WC", "labexpid: LID47021,LID47020,LID47020,LID47021", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 056WC", "labexpid: LID47021", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358728 SRX179440 SRR545711 408918192 408918192 1 TRUE FALSE 379418297 38011292054 muscle other 2012-08-20T13:05:18.130 2012-08-20T13:05:18.130 2014-08-27T04:31:54.033 202 GSM984615 SRR545711.bw CSHL_RnaSeq_SkMC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 047WC,048WC,047WC,048WC", "labexpid: LID47246,LID47245,LID47245,LID47246", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 048WC", "labexpid: LID47246", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358728 SRX179440 SRR545712 440938092 440938092 1 TRUE FALSE 405645886 40613271920 muscle other 2012-08-20T13:05:18.130 2012-08-20T13:05:18.130 2014-08-27T04:31:54.033 202 GSM984615 SRR545712.bw CSHL_RnaSeq_SkMC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 047WC,048WC,047WC,048WC", "labexpid: LID47246,LID47245,LID47245,LID47246", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 048WC", "labexpid: LID47246", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358729 SRX179441 SRR545713 282593222 282593222 1 TRUE FALSE 270439959 27125870309 skin other 2012-08-20T13:05:18.210 2012-08-20T13:05:18.210 2014-08-27T04:31:54.623 202 GSM984616 SRR545713.bw CSHL_RnaSeq_NHEM.f_M2_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 081WC,081WC,082WC,082WC", "labexpid: LID47256,LID47257,LID47257,LID47256", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 082WC", "labexpid: LID47257", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358729 SRX179441 SRR545714 291361964 291361964 1 TRUE FALSE 276782439 27766916001 skin other 2012-08-20T13:05:18.210 2012-08-20T13:05:18.210 2014-08-27T04:31:54.623 202 GSM984616 SRR545714.bw CSHL_RnaSeq_NHEM.f_M2_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 081WC,081WC,082WC,082WC", "labexpid: LID47256,LID47257,LID47257,LID47256", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 082WC", "labexpid: LID47257", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358730 SRX179442 SRR545715 302897598 302897598 1 TRUE FALSE 288022223 28915768971 skin other 2012-08-20T13:05:18.303 2012-08-20T13:05:18.303 2014-08-27T04:31:55.380 202 GSM984617 SRR545715.bw CSHL_RnaSeq_NHEM_M2_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 083WC,084WC,083WC,084WC", "labexpid: LID47259,LID47258,LID47258,LID47259", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 084WC", "labexpid: LID47259", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358730 SRX179442 SRR545716 264977274 264977274 1 TRUE FALSE 253872724 25499683030 skin other 2012-08-20T13:05:18.303 2012-08-20T13:05:18.303 2014-08-27T04:31:55.380 202 GSM984617 SRR545716.bw CSHL_RnaSeq_NHEM_M2_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 083WC,084WC,083WC,084WC", "labexpid: LID47259,LID47258,LID47258,LID47259", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 084WC", "labexpid: LID47259", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358731 SRX179443 SRR545717 351945034 351945034 1 TRUE FALSE 346690014 34805821421 blood vessel other 2012-08-20T13:05:18.383 2012-08-20T13:05:18.383 2014-08-27T04:31:55.743 202 GSM984618 SRR545717.bw CSHL_RnaSeq_HAoEC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 058WC,057WC,058WC,057WC,057WC,058WC", "labexpid: LID47022,LID47023,LID47022,LID47023,LID47023,LID47022", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 057WC", "labexpid: LID47022", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS358731 SRX179443 SRR545718 355647696 355647696 1 TRUE FALSE 348955021 35026051493 blood vessel other 2012-08-20T13:05:18.383 2012-08-20T13:05:18.383 2014-08-27T04:31:55.743 202 GSM984618 SRR545718.bw CSHL_RnaSeq_HAoEC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 058WC,057WC,058WC,057WC,057WC,058WC", "labexpid: LID47022,LID47023,LID47022,LID47023,LID47023,LID47022", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 057WC", "labexpid: LID47022", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS358732 SRX179444 SRR545719 418034188 418034188 1 TRUE FALSE 405139932 40649565014 placenta other 2012-08-20T13:05:18.450 2012-08-20T13:05:18.450 2014-08-27T04:31:56.057 202 GSM984619 SRR545719.bw CSHL_RnaSeq_HVMF_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 051WC,052WC,051WC,052WC", "labexpid: LID47250,LID47249,LID47250,LID47249", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 051WC", "labexpid: LID47249", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS358732 SRX179444 SRR545720 412796108 412796108 1 TRUE FALSE 395190342 39627942974 placenta other 2012-08-20T13:05:18.450 2012-08-20T13:05:18.450 2014-08-27T04:31:56.057 202 GSM984619 SRR545720.bw CSHL_RnaSeq_HVMF_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 051WC,052WC,051WC,052WC", "labexpid: LID47250,LID47249,LID47250,LID47249", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 051WC", "labexpid: LID47249", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13") SRP007461 SRS358733 SRX179445 SRR545721 331627030 331627030 1 TRUE FALSE 312321528 31335995181 adipose tissue other 2012-08-20T13:05:18.557 2012-08-20T13:05:18.557 2014-08-27T04:31:56.533 202 GSM984620 SRR545721.bw CSHL_RnaSeq_HWP_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 080WC,079WC,080WC,080WC,079WC,079WC", "labexpid: LID47255,LID47254,LID47254,LID47255,LID47255,LID47254", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 080WC", "labexpid: LID47255", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358733 SRX179445 SRR545722 278694492 278694492 1 TRUE FALSE 267677533 26884087524 adipose tissue other 2012-08-20T13:05:18.557 2012-08-20T13:05:18.557 2014-08-27T04:31:56.533 202 GSM984620 SRR545722.bw CSHL_RnaSeq_HWP_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 080WC,079WC,080WC,080WC,079WC,079WC", "labexpid: LID47255,LID47254,LID47254,LID47255,LID47255,LID47254", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1,2", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 080WC", "labexpid: LID47255", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 2", "spikeinpool: Nist13") SRP007461 SRS358734 SRX179446 SRR545723 293688094 293688094 1 TRUE FALSE 288560585 28957060190 breast other 2012-08-20T13:05:18.637 2012-08-20T13:05:18.637 2014-08-27T04:31:57.100 202 GSM984621 SRR545723.bw CSHL_RnaSeq_HMEpC_cell_total c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 063WC", "labexpid: LID47096", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "replicate: 1", "spikeinpool: Nist13", "localization description: Whole cell", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: 063WC", "labexpid: LID47096", "labversion: iIDR", "readtype: 2x101D", "readtype description: Paired 101 nt directed reads", "spikeinpool: Nist13") SRP007461 SRS241959 SRX084674 SRR315317 57995628 0 0 TRUE FALSE 0 NA lung other 2011-07-21T16:57:06.257 2011-07-21T16:57:07.873 2014-08-27T01:31:18.373 152 GSM765396 NA CSHL_RnaSeq_AG04450_cell_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 017WC,018WC,018WC,017WC", "labexpid: LID9001,LID9002,LID9002,LID9001", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 017WC", "labexpid: LID9001", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1") SRP007461 SRS242513 SRX085302 SRR317058 206938718 0 0 TRUE FALSE 0 NA blood gm12878 2011-07-28T14:47:07.117 2011-07-28T14:47:08.570 2014-08-27T04:47:21.890 152 GSM767852 NA CSHL_RnaSeq_GM12878_cytosol_longNonPolyA c("datatype: RnaSeq", "datatype description: Sequencing analysis of RNA expression", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 004C,003C,004C,003C", "labexpid: LID18548,LID18547,LID18548,LID18547", "labversion: iIDR", "readtype: 2x76D", "readtype description: Paired 76 nt directed reads", "replicate: 1,2", "spikeinpool: Nist14", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: 003C", "labexpid: LID18547", "readtype: 2x76D", "readtype description: Paired 76 n.t. directed reads", "replicate: 1", "replicate description: tier 1")