project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP007498 SRS228112 SRX083302 SRR309282 155196096 155196096 1 TRUE FALSE 146674719 14507445110 cervix hela 2011-07-18T16:09:05.883 2011-07-18T16:09:11.230 2014-03-06T14:44:14.223 200 GSM741170 SRR309282.bw HeLa mock knockdown 5d c("cell line: HeLa", "knockdown: mock", "time post transfection: 120h") SRP007498 SRS228113 SRX083303 SRR309283 160377924 160377924 1 TRUE FALSE 151403064 14972214067 cervix hela 2011-07-18T16:09:05.920 2011-07-18T16:09:11.230 2014-03-06T14:44:14.262 200 GSM741171 SRR309283.bw HeLa ELAVL1/HuR siRNA1 2d c("cell line: HeLa", "knockdown: ELAVL1/HuR siRNA1 (see Lebedeva et. Al 2011)", "time post transfection: 48h") SRP007498 SRS228114 SRX083304 SRR309284 153065692 153065692 1 TRUE FALSE 144629690 14312029413 cervix hela 2011-07-18T16:09:05.933 2011-07-18T16:09:11.230 2015-03-12T01:14:27.730 200 GSM741172 SRR309284.bw HeLa ELAVL1/HuR siRNA1 5d c("cell line: HeLa", "knockdown: ELAVL1/HuR siRNA1 (see Lebedeva et. Al 2011)", "time post transfection: 120h") SRP007498 SRS228115 SRX083305 SRR309285 13636560 13636560 1 FALSE FALSE 1593849 37708754 cervix hela 2011-07-18T16:09:05.950 2011-07-18T16:09:11.230 2014-03-06T14:44:14.338 36 GSM741173 SRR309285.bw HeLa 4SU DMEM PAR-CLIP c("cell line: HeLa", "antibody: 3A2", "antibody manufacturer: Santa Cruz", "antibody catalog #: sc-5261", "culture medium: DMEM") SRP007498 SRS228116 SRX083306 SRR309286 21837489 21837489 1 FALSE FALSE 4649563 107483272 cervix hela 2011-07-18T16:09:05.963 2011-07-18T16:09:11.230 2014-03-06T14:44:14.375 36 GSM741174 SRR309286.bw HeLa 4SU SILAC PAR-CLIP c("cell line: HeLa", "antibody: 3A2", "antibody manufacturer: Santa Cruz", "antibody catalog #: sc-5261", "culture medium: SILAC") SRP007498 SRS228117 SRX083307 SRR309287 20322636 20322636 1 FALSE FALSE 7167908 169837445 cervix hela 2011-07-18T16:09:05.980 2011-07-18T16:09:11.230 2014-03-06T14:44:14.419 36 GSM741175 SRR309287.bw HeLa 6SG SILAC PAR-CLIP c("cell line: HeLa", "antibody: 3A2", "antibody manufacturer: Santa Cruz", "antibody catalog #: sc-5261", "culture medium: SILAC") SRP007498 SRS228118 SRX083308 SRR309288 13823407 13823407 1 FALSE FALSE 10527924 245578115 cervix hela 2011-07-18T16:23:06.500 2011-07-18T16:23:10.410 2014-03-06T14:44:14.452 36 GSM755025 SRR309288.bw HeLa sRNA mock sRNA c("cell line: HeLa", "knockdown: none") SRP007498 SRS228119 SRX083309 SRR309289 29875953 29875953 1 FALSE FALSE 20951980 491605915 cervix hela 2011-07-18T16:23:06.523 2011-07-18T16:23:10.410 2014-03-06T14:44:14.491 36 GSM755026 SRR309289.bw HeLa ELAV1/HuR sRNA siRNA1 c("cell line: HeLa", "knockdown: ELAVL1/HuR siRNA1 (see Lebedeva et. Al 2011)") SRP007498 SRS228120 SRX083310 SRR309290 23616037 23616037 1 FALSE FALSE 16751679 386839044 cervix hela 2011-07-18T16:23:06.540 2011-07-18T16:23:10.410 2014-03-06T14:44:14.527 36 GSM755027 SRR309290.bw HeLa ELAV1/HuR sRNA siRNA2 c("cell line: HeLa", "knockdown: ELAVL1/HuR siRNA1 (see Lebedeva et. Al 2011)")