project	sample	experiment	run	read_count_as_reported_by_sra	reads_downloaded	proportion_of_reads_reported_by_sra_downloaded	paired_end	sra_misreported_paired_end	mapped_read_count	auc	sharq_beta_tissue	sharq_beta_cell_type	biosample_submission_date	biosample_publication_date	biosample_update_date	avg_read_length	geo_accession	bigwig_file	title	characteristics
SRP009862	SRS282678	SRX111922	SRR390470	25469217	25469217	1	FALSE	FALSE	23393086	624388080	blood vessel	huvec	2011-12-16T09:42:03.990	2011-12-16T09:42:08.040	2014-09-09T01:24:15.937	36	GSM849324	SRR390470.bw	RIKEN_Cage_HUVEC_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029C,030C,029C,030C", "labexpid: K03,K04,K03,K04", "labversion: IDR", "replicate: 3,4", "cell lineage: mesoderm", "cell sex: U", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029C", "labexpid: K03", 
"replicate: 3", "replicate description: tier 3")
SRP009862	SRS282678	SRX111922	SRR390471	26623357	26623357	1	FALSE	FALSE	25186146	673518786	blood vessel	huvec	2011-12-16T09:42:03.990	2011-12-16T09:42:08.040	2014-09-09T01:24:15.937	36	GSM849324	SRR390471.bw	RIKEN_Cage_HUVEC_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029C,030C,029C,030C", "labexpid: K03,K04,K03,K04", "labversion: IDR", "replicate: 3,4", "cell lineage: mesoderm", "cell sex: U", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 029C", "labexpid: K03", 
"replicate: 3", "replicate description: tier 3")
SRP009862	SRS282679	SRX111923	SRR390472	26857264	26857264	1	FALSE	FALSE	25490061	693010156	blood vessel	huvec	2011-12-16T09:42:04.023	2011-12-16T09:42:08.040	2014-09-09T01:24:16.463	36	GSM849325	SRR390472.bw	RIKEN_Cage_HUVEC_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 030N,029N,030N,029N", "labexpid: K05,K06,K05,K06", "labversion: IDR", "replicate: 3,4", "cell lineage: mesoderm", "cell sex: U", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 029N", "labexpid: K05", "replicate: 3", "replicate description: tier 3")
SRP009862	SRS282679	SRX111923	SRR390473	25467264	25467264	1	FALSE	FALSE	24268756	658988407	blood vessel	huvec	2011-12-16T09:42:04.023	2011-12-16T09:42:08.040	2014-09-09T01:24:16.463	36	GSM849325	SRR390473.bw	RIKEN_Cage_HUVEC_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 030N,029N,030N,029N", "labexpid: K05,K06,K05,K06", "labversion: IDR", "replicate: 3,4", "cell lineage: mesoderm", "cell sex: U", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 029N", "labexpid: K05", "replicate: 3", "replicate description: tier 3")
SRP009862	SRS282680	SRX111924	SRR390474	24270521	24270521	1	FALSE	FALSE	22400483	595745936	stem cell	esc	2011-12-16T09:42:04.053	2011-12-16T09:42:08.040	2014-09-09T01:24:16.810	36	GSM849326	SRR390474.bw	RIKEN_Cage_H1-hESC_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006N", "labexpid: J95", "readtype: 1x36", "readtype description: Single 36 nt reads", "cell lineage: inner cell mass", "cell sex: M", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 006N", "labexpid: J95", "replicate: 2", "replicate description: tier 2")
SRP009862	SRS282681	SRX111925	SRR390475	26022672	26022672	1	FALSE	FALSE	24361722	645159860	blood vessel	huvec	2011-12-16T09:42:04.090	2011-12-16T09:42:08.040	2014-09-09T01:24:17.130	36	GSM849327	SRR390475.bw	RIKEN_Cage_HUVEC_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 009WC,010WC,009WC,010WC", "labexpid: J78,J79,J78,J79", "labversion: IDR", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: U", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 009WC", "labexpid: J78", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282681	SRX111925	SRR390476	27896218	27896218	1	FALSE	FALSE	25398412	669397273	blood vessel	huvec	2011-12-16T09:42:04.090	2011-12-16T09:42:08.040	2014-09-09T01:24:17.130	36	GSM849327	SRR390476.bw	RIKEN_Cage_HUVEC_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 009WC,010WC,009WC,010WC", "labexpid: J78,J79,J78,J79", "labversion: IDR", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: U", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 009WC", "labexpid: J78", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282682	SRX111926	SRR390477	15714585	15714585	1	FALSE	FALSE	14391122	383530434	skin	bj	2011-12-16T09:42:04.120	2011-12-16T09:42:08.040	2014-09-09T01:24:17.427	36	GSM849328	SRR390477.bw	RIKEN_Cage_BJ_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: skin fibroblast, \"The line was established from skin taken from normal foreskin.\" - ATCC. (PMID: 9916803)", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 037WC,038WC,037WC,038WC", "labexpid: K19,K18,K18,K19", "labversion: IDR", "replicate: 1,2", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 037WC", "labexpid: K18", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282682	SRX111926	SRR390478	14240588	14240588	1	FALSE	FALSE	12384293	336728056	skin	bj	2011-12-16T09:42:04.120	2011-12-16T09:42:08.040	2014-09-09T01:24:17.427	36	GSM849328	SRR390478.bw	RIKEN_Cage_BJ_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: skin fibroblast, \"The line was established from skin taken from normal foreskin.\" - ATCC. (PMID: 9916803)", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 037WC,038WC,037WC,038WC", "labexpid: K19,K18,K18,K19", "labversion: IDR", "replicate: 1,2", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 037WC", "labexpid: K18", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282684	SRX111928	SRR390480	20058175	20058175	1	FALSE	FALSE	18107123	478783576	cervix	s3	2011-12-16T09:42:04.183	2011-12-16T09:42:08.040	2014-09-09T01:24:17.707	36	GSM849330	SRR390480.bw	RIKEN_Cage_HeLa-S3_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011C,012C,011C,012C", "labexpid: J88,J87,J88,J87", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011C", "labexpid: J87", 
"replicate: 1", "replicate description: tier 1")
SRP009862	SRS282684	SRX111928	SRR390481	23300310	23300310	1	FALSE	FALSE	21324938	561242970	cervix	s3	2011-12-16T09:42:04.183	2011-12-16T09:42:08.040	2014-09-09T01:24:17.707	36	GSM849330	SRR390481.bw	RIKEN_Cage_HeLa-S3_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011C,012C,011C,012C", "labexpid: J88,J87,J88,J87", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011C", "labexpid: J87", 
"replicate: 1", "replicate description: tier 1")
SRP009862	SRS282685	SRX111929	SRR390482	16033121	16033121	1	FALSE	FALSE	14309459	382259533	cervix	s3	2011-12-16T09:42:04.220	2011-12-16T09:42:08.040	2014-09-09T01:24:17.980	36	GSM849331	SRR390482.bw	RIKEN_Cage_HeLa-S3_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011N,012N,012N,011N", "labexpid: J96,J97,J96,J97", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 011N", "labexpid: J96", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282685	SRX111929	SRR390483	28656550	28656550	1	FALSE	FALSE	25831324	686035602	cervix	s3	2011-12-16T09:42:04.220	2011-12-16T09:42:08.040	2014-09-09T01:24:17.980	36	GSM849331	SRR390483.bw	RIKEN_Cage_HeLa-S3_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011N,012N,012N,011N", "labexpid: J96,J97,J96,J97", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 011N", "labexpid: J96", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282686	SRX111930	SRR390484	27839343	27839343	1	FALSE	FALSE	19671302	509140250	blood	k562	2011-12-16T09:42:04.250	2011-12-16T09:42:08.040	2014-09-09T01:24:18.420	36	GSM849332	SRR390484.bw	RIKEN_Cage_K562_nucleolus_total	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0144NL", "labexpid: I33", "cell description: leukemia, \"The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises.\" - ATCC", "cell karyotype: cancer", "cell lineage: mesoderm", "cell sex: F", "localization: nucleolus", 
"localization description: The part of the nucleus where ribosomal RNA is actively transcribed", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0144NL", "labexpid: I33")
SRP009862	SRS282687	SRX111931	SRR390485	3788057	3788057	1	FALSE	FALSE	2952204	75763553	blood	k562	2011-12-16T09:42:04.283	2011-12-16T09:42:08.040	2014-09-09T01:24:18.863	36	GSM849333	SRR390485.bw	RIKEN_Cage_K562_chromatin_total	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0134CH", "labexpid: I35", "labversion: bedtools v2.7.1", "cell karyotype: cancer", "cell lineage: mesoderm", "cell sex: F", "localization: chromatin", "localization description: Nuclear DNA and associated proteins", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0134CH", "labexpid: I35", 
"labversion: Delve version 0.9")
SRP009862	SRS282688	SRX111932	SRR390486	21568624	21568624	1	FALSE	FALSE	19986013	535308374	liver	hepg2	2011-12-16T09:42:04.313	2011-12-16T09:42:08.040	2014-09-09T01:29:14.593	36	GSM849334	SRR390486.bw	RIKEN_Cage_HepG2_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013N,013N,014N,014N", "labexpid: J98,J99,J98,J99", "labversion: IDR", "replicate: 1,2", "cell sex: M", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 013N", "labexpid: J98", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282688	SRX111932	SRR390487	23486945	23486945	1	FALSE	FALSE	22080276	588873937	liver	hepg2	2011-12-16T09:42:04.313	2011-12-16T09:42:08.040	2014-09-09T01:29:14.593	36	GSM849334	SRR390487.bw	RIKEN_Cage_HepG2_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013N,013N,014N,014N", "labexpid: J98,J99,J98,J99", "labversion: IDR", "replicate: 1,2", "cell sex: M", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 013N", "labexpid: J98", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282689	SRX111933	SRR390488	26300508	26300508	1	FALSE	FALSE	24184106	645131143	liver	hepg2	2011-12-16T09:42:04.347	2011-12-16T09:42:08.040	2014-09-09T01:29:14.980	36	GSM849335	SRR390488.bw	RIKEN_Cage_HepG2_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 014WC,013WC,013WC,014WC", "labexpid: K01,K02,K01,K02", "labversion: IDR", "replicate: 1,2", "cell sex: M", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013WC", "labexpid: K01", "replicate: 1", 
"replicate description: tier 1")
SRP009862	SRS282689	SRX111933	SRR390489	26916516	26916516	1	FALSE	FALSE	25737131	686543562	liver	hepg2	2011-12-16T09:42:04.347	2011-12-16T09:42:08.040	2014-09-09T01:29:14.980	36	GSM849335	SRR390489.bw	RIKEN_Cage_HepG2_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 014WC,013WC,013WC,014WC", "labexpid: K01,K02,K01,K02", "labversion: IDR", "replicate: 1,2", "cell sex: M", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 013WC", "labexpid: K01", "replicate: 1", 
"replicate description: tier 1")
SRP009862	SRS282692	SRX111936	SRR390492	23825351	23825351	1	FALSE	FALSE	21066870	561606307	blood	k562	2011-12-16T09:42:04.440	2011-12-16T09:42:08.040	2014-09-09T01:29:16.023	36	GSM849338	SRR390492.bw	RIKEN_Cage_K562_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001N,002N,001N,002N", "labexpid: J91,J92,J92,J91", "labversion: IDR", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: F", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 001N", "labexpid: J91", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282692	SRX111936	SRR390493	20885076	20885076	1	FALSE	FALSE	18978661	506280310	blood	k562	2011-12-16T09:42:04.440	2011-12-16T09:42:08.040	2014-09-09T01:29:16.023	36	GSM849338	SRR390493.bw	RIKEN_Cage_K562_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001N,002N,001N,002N", "labexpid: J91,J92,J92,J91", "labversion: IDR", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: F", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 001N", "labexpid: J91", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282693	SRX111937	SRR390494	6431605	6431605	1	FALSE	FALSE	4959011	130515323	blood	k562	2011-12-16T09:42:04.470	2011-12-16T09:42:08.040	2014-09-09T01:16:14.280	36	GSM849339	SRR390494.bw	RIKEN_Cage_K562_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001C,002C,001C,gen0137C,002C", "labexpid: J83,J82,J82,J83,I40", "labversion: bedtools v2.7.1,IDR", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: gen0137C", "labexpid: I40", "labversion: Delve version 0.9")
SRP009862	SRS282693	SRX111937	SRR390495	24939806	24939806	1	FALSE	FALSE	23170125	611928233	blood	k562	2011-12-16T09:42:04.470	2011-12-16T09:42:08.040	2014-09-09T01:16:14.280	36	GSM849339	SRR390495.bw	RIKEN_Cage_K562_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001C,002C,001C,gen0137C,002C", "labexpid: J83,J82,J82,J83,I40", "labversion: bedtools v2.7.1,IDR", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: gen0137C", "labexpid: I40", "labversion: Delve version 0.9")
SRP009862	SRS282693	SRX111937	SRR390496	19776639	19776639	1	FALSE	FALSE	17774425	467967973	blood	k562	2011-12-16T09:42:04.470	2011-12-16T09:42:08.040	2014-09-09T01:16:14.280	36	GSM849339	SRR390496.bw	RIKEN_Cage_K562_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001C,002C,001C,gen0137C,002C", "labexpid: J83,J82,J82,J83,I40", "labversion: bedtools v2.7.1,IDR", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: gen0137C", "labexpid: I40", "labversion: Delve version 0.9")
SRP009862	SRS282694	SRX111938	SRR390497	3586847	3586847	1	FALSE	FALSE	2864246	73809604	blood	k562	2011-12-16T09:42:04.500	2011-12-16T09:42:08.040	2014-09-09T01:16:14.753	36	GSM849340	SRR390497.bw	RIKEN_Cage_K562_nucleoplasm_total	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0147NP", "labexpid: I34", "labversion: bedtools v2.7.1", "cell karyotype: cancer", "cell lineage: mesoderm", "cell sex: F", "localization: nucleoplasm", "localization description: That part of the nuclear content other than the chromosomes or the nucleolus", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", 
"biorep: gen0147NP", "labexpid: I34", "labversion: Delve version 0.9")
SRP009862	SRS282695	SRX111939	SRR390498	2089737	2089737	1	FALSE	FALSE	1521117	40354891	blood	gm12878	2011-12-16T09:42:04.530	2011-12-16T09:42:08.040	2014-09-09T01:16:15.183	36	GSM849341	SRR390498.bw	RIKEN_Cage_GM12878_nucleus_longNonPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0110N", "labexpid: J59", "cell karyotype: normal", "cell lineage: mesoderm", "cell sex: F", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", 
"rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0110N", "labexpid: J59")
SRP009862	SRS282696	SRX111940	SRR390499	26748935	26748935	1	FALSE	FALSE	24374946	643949699	cervix	s3	2011-12-16T09:42:04.563	2011-12-16T09:42:08.040	2014-09-09T01:16:15.670	36	GSM849342	SRR390499.bw	RIKEN_Cage_HeLa-S3_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011WC,012WC,012WC,011WC", "labexpid: J81,J80,J80,J81", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011WC", "labexpid: J80", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282696	SRX111940	SRR390500	23631579	23631579	1	FALSE	FALSE	20635997	543853695	cervix	s3	2011-12-16T09:42:04.563	2011-12-16T09:42:08.040	2014-09-09T01:16:15.670	36	GSM849342	SRR390500.bw	RIKEN_Cage_HeLa-S3_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011WC,012WC,012WC,011WC", "labexpid: J81,J80,J80,J81", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 011WC", "labexpid: J80", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282697	SRX111941	SRR390501	20123256	20123256	1	FALSE	FALSE	18374801	485517280	liver	hepg2	2011-12-16T09:42:04.593	2011-12-16T09:42:08.040	2014-09-09T01:16:16.047	36	GSM849343	SRR390501.bw	RIKEN_Cage_HepG2_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 014C,013C,014C,013C", "labexpid: J89,J89,J90,J90", "labversion: IDR", "replicate: 1,2", "cell sex: M", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 013C", "labexpid: J89", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282697	SRX111941	SRR390502	23176897	23176897	1	FALSE	FALSE	21408076	567187804	liver	hepg2	2011-12-16T09:42:04.593	2011-12-16T09:42:08.040	2014-09-09T01:16:16.047	36	GSM849343	SRR390502.bw	RIKEN_Cage_HepG2_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: hepatocellular carcinoma", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 014C,013C,014C,013C", "labexpid: J89,J89,J90,J90", "labversion: IDR", "replicate: 1,2", "cell sex: M", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 013C", "labexpid: J89", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282698	SRX111942	SRR390503	39696916	39696916	1	FALSE	FALSE	33557654	893238953	liver	hepg2	2011-12-16T09:42:04.623	2011-12-16T09:42:08.040	2014-09-09T01:16:16.303	36	GSM849344	SRR390503.bw	RIKEN_Cage_HepG2_nucleolus_total	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: hepatocellular carcinoma", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0127NL", "labexpid: I68", "cell karyotype: cancer", "cell lineage: endoderm", "cell sex: M", "localization: nucleolus", "localization description: The part of the nucleus where ribosomal RNA is actively transcribed", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", 
"biorep: gen0127NL", "labexpid: I68")
SRP009862	SRS282699	SRX111943	SRR390504	21284628	21284628	1	FALSE	FALSE	17252957	473960493	liver	hepg2	2011-12-16T09:42:04.653	2011-12-16T09:42:08.040	2014-09-09T01:20:14.957	36	GSM849345	SRR390504.bw	RIKEN_Cage_HepG2_nucleus_longNonPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: hepatocellular carcinoma", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0128N", "labexpid: I44", "labversion: bedtools v2.7.1", "cell lineage: endoderm", "cell sex: M", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", 
"biorep: gen0128N", "labexpid: I44", "labversion: Delve version 0.9")
SRP009862	SRS282700	SRX111944	SRR390505	24744903	24744903	1	FALSE	FALSE	17089165	462204460	skin	esc	2011-12-16T09:42:04.683	2011-12-16T09:42:08.040	2014-09-09T01:20:15.237	36	GSM849346	SRR390505.bw	RIKEN_Cage_NHEK_cytosol_longNonPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0155C", "labexpid: I70", "labversion: bedtools v2.7.1", "cell karyotype: normal", "cell lineage: ectoderm", "cell sex: U", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0155C", 
"labexpid: I70", "labversion: Delve version 0.9")
SRP009862	SRS282701	SRX111945	SRR390506	29101933	29101933	1	FALSE	FALSE	23910884	645005529	skin	esc	2011-12-16T09:42:04.713	2011-12-16T09:42:08.040	2014-09-09T01:20:15.590	36	GSM849347	SRR390506.bw	RIKEN_Cage_NHEK_nucleus_longNonPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0157N", "labexpid: I71", "labversion: bedtools v2.7.1", "cell karyotype: normal", "cell lineage: ectoderm", "cell sex: U", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", 
"biorep: gen0157N", "labexpid: I71", "labversion: Delve version 0.9")
SRP009862	SRS282702	SRX111946	SRR390507	10901065	10901065	1	FALSE	FALSE	9519099	252113989	blood	gm12878	2011-12-16T09:42:04.747	2011-12-16T09:42:08.040	2014-09-09T01:20:15.930	36	GSM849348	SRR390507.bw	RIKEN_Cage_GM12878_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N,004N,003N,004N", "labexpid: J93,J94,J94,J93", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", 
"rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N", "labexpid: J93", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282702	SRX111946	SRR390508	11550804	11550804	1	FALSE	FALSE	10048327	265655617	blood	gm12878	2011-12-16T09:42:04.747	2011-12-16T09:42:08.040	2014-09-09T01:20:15.930	36	GSM849348	SRR390508.bw	RIKEN_Cage_GM12878_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N,004N,003N,004N", "labexpid: J93,J94,J94,J93", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", 
"rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N", "labexpid: J93", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282702	SRX111946	SRR390509	12226453	12226453	1	FALSE	FALSE	10563485	280247341	blood	gm12878	2011-12-16T09:42:04.747	2011-12-16T09:42:08.040	2014-09-09T01:20:15.930	36	GSM849348	SRR390509.bw	RIKEN_Cage_GM12878_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N,004N,003N,004N", "labexpid: J93,J94,J94,J93", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", 
"rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N", "labexpid: J93", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282702	SRX111946	SRR390510	11224690	11224690	1	FALSE	FALSE	10207546	271346613	blood	gm12878	2011-12-16T09:42:04.747	2011-12-16T09:42:08.040	2014-09-09T01:20:15.930	36	GSM849348	SRR390510.bw	RIKEN_Cage_GM12878_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N,004N,003N,004N", "labexpid: J93,J94,J94,J93", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: nucleus", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", 
"rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003N", "labexpid: J93", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282703	SRX111947	SRR390512	11888797	11888797	1	FALSE	FALSE	10648505	280340885	blood	gm12878	2011-12-16T09:42:04.780	2011-12-16T09:42:08.040	2014-09-09T01:20:16.227	36	GSM849349	SRR390512.bw	RIKEN_Cage_GM12878_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 004C,003C,004C,003C", "labexpid: J84,J85,J85,J84", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", 
"rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003C", "labexpid: J84", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282703	SRX111947	SRR390513	11292129	11292129	1	FALSE	FALSE	10554608	279298723	blood	gm12878	2011-12-16T09:42:04.780	2011-12-16T09:42:08.040	2014-09-09T01:20:16.227	36	GSM849349	SRR390513.bw	RIKEN_Cage_GM12878_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 004C,003C,004C,003C", "labexpid: J84,J85,J85,J84", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", 
"rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003C", "labexpid: J84", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282703	SRX111947	SRR390514	12107457	12107457	1	FALSE	FALSE	11123564	294079561	blood	gm12878	2011-12-16T09:42:04.780	2011-12-16T09:42:08.040	2014-09-09T01:20:16.227	36	GSM849349	SRR390514.bw	RIKEN_Cage_GM12878_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 004C,003C,004C,003C", "labexpid: J84,J85,J85,J84", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", 
"rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003C", "labexpid: J84", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282704	SRX111948	SRR390515	13312245	13312245	1	FALSE	FALSE	10974477	293266704	blood vessel	huvec	2011-12-16T09:42:04.810	2011-12-16T09:42:08.040	2014-09-09T01:20:16.640	36	GSM849350	SRR390515.bw	RIKEN_Cage_HUVEC_cytosol_longNonPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0116C", "labexpid: I72", "labversion: bedtools v2.7.1", "cell karyotype: normal", "cell lineage: mesoderm", "cell sex: U", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0116C", 
"labexpid: I72", "labversion: Delve version 0.9")
SRP009862	SRS282705	SRX111949	SRR390516	18761952	18761952	1	FALSE	FALSE	14982555	398216995	liver	hepg2	2011-12-16T09:42:04.840	2011-12-16T09:42:08.040	2014-09-09T01:20:17.050	36	GSM849351	SRR390516.bw	RIKEN_Cage_HepG2_cytosol_longNonPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: hepatocellular carcinoma", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0125C", "labexpid: I42", "labversion: bedtools v2.7.1", "cell lineage: endoderm", "cell sex: M", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", 
"biorep: gen0125C", "labexpid: I42", "labversion: Delve version 0.9")
SRP009862	SRS282706	SRX111950	SRR390517	32266490	32266490	1	FALSE	FALSE	26803597	715260661	blood	gm12878	2011-12-16T09:42:04.870	2011-12-16T09:42:08.040	2014-09-09T01:20:17.417	36	GSM849352	SRR390517.bw	RIKEN_Cage_GM12878_nucleolus_total	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0109NL", "labexpid: I69", "cell karyotype: normal", "cell lineage: mesoderm", "cell sex: F", "localization: nucleolus", "localization description: The part of the nucleus where ribosomal RNA is actively transcribed", 
"rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0109NL", "labexpid: I69")
SRP009862	SRS282708	SRX111952	SRR390519	4047594	4047594	1	FALSE	FALSE	2798965	71879702	blood	k562	2011-12-16T09:42:04.930	2011-12-16T09:42:08.040	2014-09-09T01:20:18.087	36	GSM849354	SRR390519.bw	RIKEN_Cage_K562_polysome_longNonPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0152P", "labexpid: I32", "labversion: bedtools v2.7.1", "cell karyotype: cancer", "cell lineage: mesoderm", "cell sex: F", "localization: polysome", "localization description: Strand of mRNA with ribosomes attached", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0152P", "labexpid: I32", 
"labversion: Delve version 0.9")
SRP009862	SRS282709	SRX111953	SRR390520	26032893	26032893	1	FALSE	FALSE	23190100	620928772	stem cell	esc	2011-12-16T09:42:04.960	2011-12-16T09:42:08.040	2014-09-09T01:20:18.490	36	GSM849355	SRR390520.bw	RIKEN_Cage_H1-hESC_cell_longNonPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0113WC", "labexpid: I67", "softwareversion: bedtools v2.7.1", "cell karyotype: normal", "cell lineage: inner cell mass", "cell sex: M", "localization: cell", "localization description: Whole cell", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0113WC", "labexpid: I67", "softwareversion: Delve version 0.9"
)
SRP009862	SRS282710	SRX111954	SRR390521	24650825	24650825	1	FALSE	FALSE	22842689	602450228	stem cell	esc	2011-12-16T09:42:04.993	2011-12-16T09:42:08.040	2014-09-09T01:20:18.820	36	GSM849356	SRR390521.bw	RIKEN_Cage_H1-hESC_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006C", "labexpid: J86", "readtype: 1x36", "readtype description: Single 36 nt reads", "cell lineage: inner cell mass", "cell sex: M", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006C", 
"labexpid: J86", "replicate: 2", "replicate description: tier 2")
SRP009862	SRS282711	SRX111955	SRR390522	24819707	24819707	1	FALSE	FALSE	23164356	613183990	stem cell	esc	2011-12-16T09:42:05.027	2011-12-16T09:42:08.040	2014-09-09T01:20:19.117	36	GSM849357	SRR390522.bw	RIKEN_Cage_H1-hESC_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006WC,005WC,006WC,005WC", "labexpid: J74,J75,J74,J75", "labversion: IDR", "replicate: 1,2", "cell lineage: inner cell mass", "cell sex: M", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 005WC", "labexpid: J74", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282711	SRX111955	SRR390523	23057181	23057181	1	FALSE	FALSE	21409388	568378383	stem cell	esc	2011-12-16T09:42:05.027	2011-12-16T09:42:08.040	2014-09-09T01:20:19.117	36	GSM849357	SRR390523.bw	RIKEN_Cage_H1-hESC_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 006WC,005WC,006WC,005WC", "labexpid: J74,J75,J74,J75", "labversion: IDR", "replicate: 1,2", "cell lineage: inner cell mass", "cell sex: M", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 005WC", "labexpid: J74", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282712	SRX111956	SRR390524	20730742	20730742	1	FALSE	FALSE	19232362	511274762	lung	esc	2011-12-16T09:42:05.057	2011-12-16T09:42:08.040	2014-09-09T01:20:19.367	36	GSM849358	SRR390524.bw	RIKEN_Cage_AG04450_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 017WC,018WC,018WC,017WC", "labexpid: K13,K12,K12,K13", "labversion: IDR", "replicate: 1,2", "cell lineage: endoderm", "cell sex: M", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 017WC", "labexpid: K12", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282712	SRX111956	SRR390525	16987969	16987969	1	FALSE	FALSE	15703886	418198129	lung	esc	2011-12-16T09:42:05.057	2011-12-16T09:42:08.040	2014-09-09T01:20:19.367	36	GSM849358	SRR390525.bw	RIKEN_Cage_AG04450_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 017WC,018WC,018WC,017WC", "labexpid: K13,K12,K12,K13", "labversion: IDR", "replicate: 1,2", "cell lineage: endoderm", "cell sex: M", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 017WC", "labexpid: K12", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282713	SRX111957	SRR390526	15976895	15976895	1	FALSE	FALSE	14841719	397953981	epithelium	a549	2011-12-16T09:42:05.090	2011-12-16T09:42:08.040	2014-09-09T01:20:19.627	36	GSM849359	SRR390526.bw	RIKEN_Cage_A549_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 021WC,021WC,022WC,022WC", "labexpid: K17,K16,K16,K17", "labversion: IDR", "replicate: 1,2", "cell lineage: endoderm", "cell sex: M", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 021WC", "labexpid: K16", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282713	SRX111957	SRR390527	10503359	10503359	1	FALSE	FALSE	9381283	251819364	epithelium	a549	2011-12-16T09:42:05.090	2011-12-16T09:42:08.040	2014-09-09T01:20:19.627	36	GSM849359	SRR390527.bw	RIKEN_Cage_A549_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 021WC,021WC,022WC,022WC", "labexpid: K17,K16,K16,K17", "labversion: IDR", "replicate: 1,2", "cell lineage: endoderm", "cell sex: M", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 021WC", "labexpid: K16", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282714	SRX111958	SRR390528	24683238	24683238	1	FALSE	FALSE	20793841	559532538	cervix	s3	2011-12-16T09:42:05.120	2011-12-16T09:42:08.040	2014-09-09T01:20:19.903	36	GSM849360	SRR390528.bw	RIKEN_Cage_HeLa-S3_cytosol_longNonPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0121C", "labexpid: J56", "labversion: IDR", "cell karyotype: cancer", "cell lineage: ectoderm", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longNonPolyA", "rnaextract description: Poly(A)- RNA longer than 200 nt", "biorep: gen0121C", "labexpid: J56"
)
SRP009862	SRS282715	SRX111959	SRR390529	26539645	26539645	1	FALSE	FALSE	25089712	675866890	skin	esc	2011-12-16T09:42:05.150	2011-12-16T09:42:08.040	2014-09-09T01:20:20.370	36	GSM849361	SRR390529.bw	RIKEN_Cage_NHEK_nucleus_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell sex: F", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 028N,027N,028N,027N", "labexpid: CTig10011,CTig10011,K09,K09", "labversion: IDR", "readtype: 1x36", "readtype description: Single 36 nt reads", "replicate: 3,4", "localization description: Large membrane bound part of cell containing chromosomes and the bulk of the cell's DNA", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 027N", "labexpid: K09", "replicate: 3", "replicate description: tier 3")
SRP009862	SRS282716	SRX111960	SRR390530	15198150	15198150	1	FALSE	FALSE	14004760	374861524	brain	sh	2011-12-16T09:42:05.183	2011-12-16T09:42:08.040	2014-09-09T01:20:20.723	36	GSM849362	SRR390530.bw	RIKEN_Cage_SK-N-SH_RA_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 020WC,019WC,020WC,019WC", "labexpid: K14,K15,K15,K14", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 019WC", "labexpid: K14", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282716	SRX111960	SRR390531	13359973	13359973	1	FALSE	FALSE	12487969	334547062	brain	sh	2011-12-16T09:42:05.183	2011-12-16T09:42:08.040	2014-09-09T01:20:20.723	36	GSM849362	SRR390531.bw	RIKEN_Cage_SK-N-SH_RA_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 020WC,019WC,020WC,019WC", "labexpid: K14,K15,K15,K14", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 019WC", "labexpid: K14", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282717	SRX111961	SRR390532	34347499	34347499	1	FALSE	FALSE	24826068	655657902	cervix	s3	2011-12-16T09:42:05.213	2011-12-16T09:42:08.040	2014-09-09T01:20:20.993	36	GSM849363	SRR390532.bw	RIKEN_Cage_HeLa-S3_nucleolus_total	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", "biorep: gen0123NL", "labexpid: J58", "cell description: cervical carcinoma", "cell karyotype: cancer", "cell lineage: ectoderm", "cell sex: F", "localization: nucleolus", "localization description: The part of the nucleus where ribosomal RNA is actively transcribed", "rnaextract: total", "rnaextract description: Total RNA extract (longer than 200 nt)", 
"biorep: gen0123NL", "labexpid: J58")
SRP009862	SRS282718	SRX111962	SRR390533	13988046	13988046	1	FALSE	FALSE	13207619	352637413	breast	mcf	2011-12-16T09:42:05.247	2011-12-16T09:42:08.040	2014-09-09T01:20:21.283	36	GSM849364	SRR390533.bw	RIKEN_Cage_MCF-7_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC,016WC,015WC,016WC", "labexpid: K11,K07,K11,K07", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC", "labexpid: K07", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282718	SRX111962	SRR390534	13783473	13783473	1	FALSE	FALSE	12946517	345845381	breast	mcf	2011-12-16T09:42:05.247	2011-12-16T09:42:08.040	2014-09-09T01:20:21.283	36	GSM849364	SRR390534.bw	RIKEN_Cage_MCF-7_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC,016WC,015WC,016WC", "labexpid: K11,K07,K11,K07", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC", "labexpid: K07", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282718	SRX111962	SRR390535	9954767	9954767	1	FALSE	FALSE	9210846	245478931	breast	mcf	2011-12-16T09:42:05.247	2011-12-16T09:42:08.040	2014-09-09T01:20:21.283	36	GSM849364	SRR390535.bw	RIKEN_Cage_MCF-7_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC,016WC,015WC,016WC", "labexpid: K11,K07,K11,K07", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 015WC", "labexpid: K07", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282719	SRX111963	SRR390536	20810452	20810452	1	FALSE	FALSE	19186386	508054333	blood	k562	2011-12-16T09:42:05.277	2011-12-16T09:42:08.040	2014-09-09T01:20:21.697	36	GSM849365	SRR390536.bw	RIKEN_Cage_K562_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001WC,001WC,002WC,002WC", "labexpid: J70,J71,J70,J71", "labversion: IDR", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001WC", "labexpid: J70", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282719	SRX111963	SRR390537	24668377	24668377	1	FALSE	FALSE	22952567	605517575	blood	k562	2011-12-16T09:42:05.277	2011-12-16T09:42:08.040	2014-09-09T01:20:21.697	36	GSM849365	SRR390537.bw	RIKEN_Cage_K562_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001WC,001WC,002WC,002WC", "labexpid: J70,J71,J70,J71", "labversion: IDR", "replicate: 1,2", "cell lineage: mesoderm", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 001WC", "labexpid: J70", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282720	SRX111964	SRR390538	26523331	26523331	1	FALSE	FALSE	24871261	662118816	skin	esc	2011-12-16T09:42:05.310	2011-12-16T09:42:08.040	2014-09-09T01:20:22.077	36	GSM849366	SRR390538.bw	RIKEN_Cage_NHEK_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027C,028C,027C,028C", "labexpid: K08,K20,K08,K20", "labversion: IDR", "replicate: 3,4", "cell lineage: ectoderm", "cell sex: U", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027C", "labexpid: K08", 
"replicate: 3", "replicate description: tier 3")
SRP009862	SRS282720	SRX111964	SRR390539	15426207	15426207	1	FALSE	FALSE	13814497	376885993	skin	esc	2011-12-16T09:42:05.310	2011-12-16T09:42:08.040	2014-09-09T01:20:22.077	38	GSM849366	SRR390539.bw	RIKEN_Cage_NHEK_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027C,028C,027C,028C", "labexpid: K08,K20,K08,K20", "labversion: IDR", "replicate: 3,4", "cell lineage: ectoderm", "cell sex: U", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 027C", "labexpid: K08", 
"replicate: 3", "replicate description: tier 3")
SRP009862	SRS282721	SRX111965	SRR390540	25012378	25012378	1	FALSE	FALSE	23174205	609966420	skin	esc	2011-12-16T09:42:05.340	2011-12-16T09:42:08.040	2014-09-09T01:20:22.550	36	GSM849367	SRR390540.bw	RIKEN_Cage_NHEK_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC,008WC,007WC,008WC", "labexpid: J76,J77,J76,J77", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: U", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC", "labexpid: J76", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282721	SRX111965	SRR390541	24227417	24227417	1	FALSE	FALSE	22186024	586604478	skin	esc	2011-12-16T09:42:05.340	2011-12-16T09:42:08.040	2014-09-09T01:20:22.550	36	GSM849367	SRR390541.bw	RIKEN_Cage_NHEK_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC,008WC,007WC,008WC", "labexpid: J76,J77,J76,J77", "labversion: IDR", "replicate: 1,2", "cell lineage: ectoderm", "cell sex: U", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 007WC", "labexpid: J76", "replicate: 1", "replicate description: tier 1"
)
SRP009862	SRS282722	SRX111966	SRR390542	10951891	10951891	1	FALSE	FALSE	9978469	264335373	blood	gm12878	2011-12-16T09:42:05.373	2011-12-16T09:42:08.040	2014-09-09T03:12:13.867	36	GSM849368	SRR390542.bw	RIKEN_Cage_GM12878_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003WC,004WC,003WC,004WC", "labexpid: J72,J73,J72,J73", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 003WC", "labexpid: J72", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282722	SRX111966	SRR390543	10903170	10903170	1	FALSE	FALSE	9638504	255277584	blood	gm12878	2011-12-16T09:42:05.373	2011-12-16T09:42:08.040	2014-09-09T03:12:13.867	36	GSM849368	SRR390543.bw	RIKEN_Cage_GM12878_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003WC,004WC,003WC,004WC", "labexpid: J72,J73,J72,J73", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 003WC", "labexpid: J72", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282722	SRX111966	SRR390544	13072061	13072061	1	FALSE	FALSE	12203283	322999648	blood	gm12878	2011-12-16T09:42:05.373	2011-12-16T09:42:08.040	2014-09-09T03:12:13.867	36	GSM849368	SRR390544.bw	RIKEN_Cage_GM12878_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003WC,004WC,003WC,004WC", "labexpid: J72,J73,J72,J73", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 003WC", "labexpid: J72", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282722	SRX111966	SRR390545	11116534	11116534	1	FALSE	FALSE	10129407	268434069	blood	gm12878	2011-12-16T09:42:05.373	2011-12-16T09:42:08.040	2014-09-09T03:12:13.867	36	GSM849368	SRR390545.bw	RIKEN_Cage_GM12878_cell_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003WC,004WC,003WC,004WC", "labexpid: J72,J73,J72,J73", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: cell", "localization description: Whole cell", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", 
"biorep: 003WC", "labexpid: J72", "replicate: 1", "replicate description: tier 1")
SRP009862	SRS282703	SRX111947	SRR390511	11769189	0	0	FALSE	FALSE	0	NA	blood	gm12878	2011-12-16T09:42:04.780	2011-12-16T09:42:08.040	2014-09-09T01:20:16.227	36	GSM849349	NA	RIKEN_Cage_GM12878_cytosol_longPolyA	c("datatype: Cage", "datatype description: CAGE 5' RNA Tags", "cell description: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus", "rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 004C,003C,004C,003C", "labexpid: J84,J85,J85,J84", "labversion: IDR", "replicate: 1,2", "cell sex: F", "localization: cytosol", "localization description: The fluid between the cells outer membrane and the nucleus", 
"rnaextract: longPolyA", "rnaextract description: Poly(A)+ RNA longer than 200 nt", "biorep: 003C", "labexpid: J84", "replicate: 1", "replicate description: tier 1")