project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP010038 SRS284200 SRX113256 SRR392859 3183139 3183139 1 FALSE FALSE 3073975 438197453 NA NA 2011-12-27T14:04:03.180 2014-12-03T01:35:35.120 2014-12-03T01:37:16.543 151 GSM854343 SRR392859.bw Control #1 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 1") SRP010038 SRS284201 SRX113257 SRR392860 4290629 4290629 1 FALSE FALSE 4085648 579727334 NA NA 2011-12-27T14:04:03.200 2014-12-03T01:39:12.833 2014-12-03T01:41:16.377 151 GSM854344 SRR392860.bw Doxy 50 #1 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 1") SRP010038 SRS284202 SRX113258 SRR392861 2988791 2988791 1 FALSE FALSE 2861691 406396723 NA NA 2011-12-27T14:04:03.220 2014-12-03T01:20:32.303 2014-12-03T01:25:15.507 151 GSM854345 SRR392861.bw Doxy 200 #1 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 1") SRP010038 SRS284203 SRX113259 SRR392862 9036186 9036186 1 FALSE FALSE 8697662 1254467156 NA NA 2011-12-27T14:04:03.240 2014-12-03T01:20:13.577 2014-12-03T01:25:15.970 151 GSM854346 SRR392862.bw Doxy 500 #1 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 1") SRP010038 SRS284204 SRX113260 SRR392863 1432339 1432339 1 FALSE FALSE 1367295 196129447 NA NA 2011-12-27T14:04:03.260 2014-12-03T01:20:04.703 2014-12-03T01:21:15.150 151 GSM854347 SRR392863.bw Control #2 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 2") SRP010038 SRS284205 SRX113261 SRR392864 2995017 2995017 1 FALSE FALSE 2898785 413577242 NA NA 2011-12-27T14:04:03.280 2014-12-03T01:36:21.227 2014-12-03T01:41:17.480 151 GSM854348 SRR392864.bw Doxy 50 #2 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 2") SRP010038 SRS284206 SRX113262 SRR392865 2464195 2464195 1 FALSE FALSE 2369299 340021836 NA NA 2011-12-27T14:04:03.300 2014-12-03T01:34:21.893 2014-12-03T01:37:17.110 151 GSM854349 SRR392865.bw Doxy 200 #2 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 2") SRP010038 SRS284207 SRX113263 SRR392866 2132033 2132033 1 FALSE FALSE 2041655 292157619 NA NA 2011-12-27T14:04:03.320 2014-12-03T01:27:38.203 2014-12-03T01:29:15.487 151 GSM854350 SRR392866.bw Doxy 500 #2 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 2") SRP010038 SRS284208 SRX113264 SRR392867 1871118 1871118 1 FALSE FALSE 1809263 258184088 NA NA 2011-12-27T14:04:03.413 2014-12-03T01:29:35.207 2014-12-03T01:33:16.213 151 GSM854351 SRR392867.bw Control #3 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 3") SRP010038 SRS284209 SRX113265 SRR392868 3719231 3719231 1 FALSE FALSE 3577899 508781803 NA NA 2011-12-27T14:04:03.437 2014-12-03T01:26:39.473 2014-12-03T01:29:15.770 151 GSM854352 SRR392868.bw Doxy 50 #3 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 3") SRP010038 SRS284210 SRX113266 SRR392869 3853251 3853251 1 FALSE FALSE 3720597 525872799 NA NA 2011-12-27T14:04:03.457 2014-12-03T01:29:00.110 2014-12-03T01:33:16.707 151 GSM854353 SRR392869.bw Doxy 200 #3 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 3") SRP010038 SRS284211 SRX113267 SRR392870 3450794 3450794 1 FALSE FALSE 3365471 482611321 NA NA 2011-12-27T14:04:03.477 2014-12-03T01:28:29.950 2014-12-03T01:33:17.267 151 GSM854354 SRR392870.bw Doxy 500 #3 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 3") SRP010038 SRS284212 SRX113268 SRR392871 4121006 4121006 1 FALSE FALSE 3973937 564537693 NA NA 2011-12-27T14:04:03.493 2014-12-03T01:18:37.033 2014-12-03T01:21:15.490 151 GSM854355 SRR392871.bw Control #4 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 4") SRP010038 SRS284213 SRX113269 SRR392872 4236840 4236840 1 FALSE FALSE 4085575 582639462 NA NA 2011-12-27T14:04:03.517 2014-12-03T01:37:54.857 2014-12-03T01:41:18.207 151 GSM854356 SRR392872.bw Doxy 50 #4 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 4") SRP010038 SRS284214 SRX113270 SRR392873 2243123 2243123 1 FALSE FALSE 2169560 307115789 NA NA 2011-12-27T14:04:03.537 2014-12-03T01:39:29.367 2014-12-03T01:41:18.703 151 GSM854357 SRR392873.bw Doxy 200 #4 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 4") SRP010038 SRS284215 SRX113271 SRR392874 2576298 2576298 1 FALSE FALSE 2507214 359043851 NA NA 2011-12-27T14:04:03.557 2014-12-03T01:32:08.300 2014-12-03T01:33:17.637 151 GSM854358 SRR392874.bw Doxy 500 #4 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 4") SRP010038 SRS284216 SRX113272 SRR392875 1559524 1559524 1 FALSE FALSE 1512897 217788830 NA NA 2011-12-27T14:04:03.577 2014-12-03T01:31:32.640 2014-12-03T01:33:18.043 151 GSM854359 SRR392875.bw Control #5 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 5") SRP010038 SRS284217 SRX113273 SRR392876 6297762 6297762 1 FALSE FALSE 6105880 868378006 NA NA 2011-12-27T14:04:03.597 2014-12-03T01:30:50.183 2014-12-03T01:33:18.553 151 GSM854360 SRR392876.bw Doxy 50 #5 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 5") SRP010038 SRS284218 SRX113274 SRR392877 5260694 5260694 1 FALSE FALSE 5081539 735817090 NA NA 2011-12-27T14:04:03.617 2014-12-03T01:35:20.653 2014-12-03T01:38:15.360 151 GSM854361 SRR392877.bw Doxy 200 #5 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 5") SRP010038 SRS284219 SRX113275 SRR392878 3344064 3344064 1 FALSE FALSE 3230903 463113344 NA NA 2011-12-27T14:04:03.637 2014-12-03T01:22:17.587 2014-12-03T01:25:16.303 151 GSM854362 SRR392878.bw Doxy 500 #5 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 5") SRP010038 SRS284220 SRX113276 SRR392879 2997712 2997712 1 FALSE FALSE 2924976 423637696 NA NA 2011-12-27T14:04:03.657 2014-12-03T01:27:20.927 2014-12-03T01:30:15.730 151 GSM854363 SRR392879.bw Control #6 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 6") SRP010038 SRS284221 SRX113277 SRR392880 12248186 12248186 1 FALSE FALSE 11788627 1691863293 NA NA 2011-12-27T14:04:03.677 2014-12-03T01:34:27.410 2014-12-03T01:38:15.550 151 GSM854364 SRR392880.bw Doxy 50 #6 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 6") SRP010038 SRS284222 SRX113278 SRR392881 2387932 2387932 1 FALSE FALSE 2306485 336114957 NA NA 2011-12-27T14:04:03.697 2014-12-03T01:22:02.703 2014-12-03T01:26:15.033 151 GSM854365 SRR392881.bw Doxy 200 #6 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 6") SRP010038 SRS284223 SRX113279 SRR392882 2301662 2301662 1 FALSE FALSE 2237317 316376757 NA NA 2011-12-27T14:04:03.717 2014-12-03T01:32:42.163 2014-12-03T01:38:15.723 151 GSM854366 SRR392882.bw Doxy 500 #6 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 6") SRP010038 SRS284224 SRX113280 SRR392883 3943267 3943267 1 FALSE FALSE 3791004 477669146 NA NA 2011-12-27T14:04:03.737 2014-12-03T01:37:36.810 2014-12-03T01:42:15.097 151 GSM854367 SRR392883.bw Control #7 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 7") SRP010038 SRS284225 SRX113281 SRR392884 3603482 3603482 1 FALSE FALSE 3470725 454824465 NA NA 2011-12-27T14:04:03.757 2014-12-03T01:36:43.000 2014-12-03T01:42:15.470 151 GSM854368 SRR392884.bw Doxy 50 #7 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 7") SRP010038 SRS284226 SRX113282 SRR392885 1989215 1989215 1 FALSE FALSE 1918070 237888218 NA NA 2011-12-27T14:04:03.780 2014-12-03T01:21:55.087 2014-12-03T01:26:15.507 151 GSM854369 SRR392885.bw Doxy 200 #7 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 7") SRP010038 SRS284227 SRX113283 SRR392886 242747 242747 1 FALSE FALSE 233011 28547641 NA NA 2011-12-27T14:04:03.800 2014-12-03T01:31:15.647 2014-12-03T01:33:19.057 151 GSM854370 SRR392886.bw Doxy 500 #7 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 7") SRP010038 SRS284228 SRX113284 SRR392887 1718245 1718245 1 FALSE FALSE 1657637 216964859 NA NA 2011-12-27T14:04:03.820 2014-12-03T01:21:10.613 2014-12-03T01:26:15.943 151 GSM854371 SRR392887.bw Control #8 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 8") SRP010038 SRS284229 SRX113285 SRR392888 795260 795260 1 FALSE FALSE 777674 102209414 NA NA 2011-12-27T14:04:03.840 2014-12-03T01:21:52.333 2014-12-03T01:26:16.407 151 GSM854372 SRR392888.bw Doxy 50 #8 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 8") SRP010038 SRS284230 SRX113286 SRR392889 2638764 2638764 1 FALSE FALSE 2557249 329711614 NA NA 2011-12-27T14:04:03.860 2014-12-03T01:29:31.423 2014-12-03T01:33:19.530 151 GSM854373 SRR392889.bw Doxy 200 #8 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 8") SRP010038 SRS284231 SRX113287 SRR392890 670660 670660 1 FALSE FALSE 646736 87808149 NA NA 2011-12-27T14:04:03.880 2014-12-03T01:18:49.287 2014-12-03T01:21:15.863 151 GSM854374 SRR392890.bw Doxy 500 #8 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 8") SRP010038 SRS284232 SRX113288 SRR392891 2591866 2591866 1 FALSE FALSE 2523073 339274110 NA NA 2011-12-27T14:04:03.897 2014-12-03T01:21:36.610 2014-12-03T01:26:16.970 151 GSM854375 SRR392891.bw Control #9 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 9") SRP010038 SRS284233 SRX113289 SRR392892 3622702 3622702 1 FALSE FALSE 3534852 471156182 NA NA 2011-12-27T14:04:03.917 2014-12-03T01:36:45.823 2014-12-03T01:42:15.720 151 GSM854376 SRR392892.bw Doxy 50 #9 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 9") SRP010038 SRS284234 SRX113290 SRR392893 2362690 2362690 1 FALSE FALSE 2304574 320155652 NA NA 2011-12-27T14:04:03.940 2014-12-03T01:32:35.370 2014-12-03T01:38:15.943 151 GSM854377 SRR392893.bw Doxy 200 #9 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 9") SRP010038 SRS284235 SRX113291 SRR392894 3484134 3484134 1 FALSE FALSE 3417529 464269044 NA NA 2011-12-27T14:04:03.960 2014-12-03T01:27:35.187 2014-12-03T01:30:16.123 151 GSM854378 SRR392894.bw Doxy 500 #9 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 9") SRP010038 SRS284236 SRX113292 SRR392895 768247 768247 1 FALSE FALSE 737433 87659252 NA NA 2011-12-27T14:04:03.980 2014-12-03T01:21:49.587 2014-12-03T01:26:17.800 151 GSM854379 SRR392895.bw Control #10 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Control", "patient: 10") SRP010038 SRS284237 SRX113293 SRR392896 3453509 3453509 1 FALSE FALSE 3242655 370053926 NA NA 2011-12-27T14:04:03.997 2014-12-03T01:25:41.700 2014-12-03T01:30:16.443 151 GSM854380 SRR392896.bw Doxy 50 #10 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 50", "patient: 10") SRP010038 SRS284238 SRX113294 SRR392897 2586488 2586488 1 FALSE FALSE 2529806 345417442 NA NA 2011-12-27T14:04:04.020 2014-12-03T01:26:30.997 2014-12-03T01:30:16.767 151 GSM854381 SRR392897.bw Doxy 200 #10 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 200", "patient: 10") SRP010038 SRS284239 SRX113295 SRR392898 794356 794356 1 FALSE FALSE 780343 104990115 NA NA 2011-12-27T14:04:04.040 2014-12-03T01:28:34.073 2014-12-03T01:33:20.003 151 GSM854382 SRR392898.bw Doxy 500 #10 c("cell type: Pterygia cells", "passages: 3-5", "treatment: Doxy 500", "patient: 10")