project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP010061 SRS284478 SRX113646 SRR393760 81117276 81117276 1 TRUE FALSE 79269849 5898418738 blood esc 2011-12-30T13:32:06.927 2012-11-15T17:05:15.223 2014-05-31T01:35:59.297 152 GSM854403 SRR393760.bw K-562 std gel sized c("cell type: immortalised chronic myelogenous leukemia (CML)", "cell line: K562", "sample type: K-562 std gel sized", "average insert size: 336", "std. dev. insert size: 223.877392") SRP010061 SRS284479 SRX113647 SRR393761 17491396 17491396 1 TRUE FALSE 17459738 1737335416 blood esc 2011-12-30T13:32:06.967 2012-11-15T17:05:17.150 2014-05-31T01:35:59.520 202 GSM854404 SRR393761.bw K-562 truseq 10000ng c("cell type: immortalised chronic myelogenous leukemia (CML)", "cell line: K562", "sample type: K-562 truseq 10000ng", "average insert size: 229", "std. dev. insert size: 172.945267") SRP010061 SRS284480 SRX113648 SRR393762 17938954 17938954 1 TRUE FALSE 17892511 1786967093 blood esc 2011-12-30T13:32:06.983 2012-11-15T17:05:17.193 2014-05-31T01:35:59.700 202 GSM854405 SRR393762.bw K-562 truseq 3000ng c("cell type: immortalised chronic myelogenous leukemia (CML)", "cell line: K562", "sample type: K-562 truseq 3000ng", "average insert size: 239", "std. dev. insert size: 185.42764") SRP010061 SRS284481 SRX113649 SRR393763 16296346 16296346 1 TRUE FALSE 16248059 1620436738 blood esc 2011-12-30T13:32:07.000 2012-11-15T17:05:17.237 2014-05-31T01:35:59.887 202 GSM854406 SRR393763.bw K-562 truseq 1000ng c("cell type: immortalised chronic myelogenous leukemia (CML)", "cell line: K562", "sample type: K-562 truseq 1000ng", "average insert size: 229", "std. dev. insert size: 173.245305") SRP010061 SRS284482 SRX113650 SRR393764 13898256 13898256 1 TRUE FALSE 13827778 1380400020 blood esc 2011-12-30T13:32:07.017 2012-11-15T17:05:17.347 2014-05-31T01:36:00.060 202 GSM854407 SRR393764.bw K-562 truseq 500ng c("cell type: immortalised chronic myelogenous leukemia (CML)", "cell line: K562", "sample type: K-562 truseq 500ng", "average insert size: 268", "std. dev. insert size: 227.16942") SRP010061 SRS284483 SRX113651 SRR393765 15805716 15805716 1 TRUE FALSE 15733755 1570563957 blood esc 2011-12-30T13:32:07.033 2012-11-15T17:05:17.407 2014-05-31T01:36:00.253 202 GSM854408 SRR393765.bw K-562 truseq 250ng c("cell type: immortalised chronic myelogenous leukemia (CML)", "cell line: K562", "sample type: K-562 truseq 250ng", "average insert size: 249", "std. dev. insert size: 203.395985") SRP010061 SRS284485 SRX113653 SRR393767 16219546 16219546 1 TRUE FALSE 16011404 1601924388 blood esc 2011-12-30T13:32:07.067 2012-11-15T17:05:17.487 2014-05-31T01:36:00.920 202 GSM854410 SRR393767.bw K-562 truseq 50ng c("cell type: immortalised chronic myelogenous leukemia (CML)", "cell line: K562", "sample type: K-562 truseq 50ng", "average insert size: 230", "std. dev. insert size: 170.945188") SRP010061 SRS284486 SRX113654 SRR393768 14365746 14365746 1 TRUE FALSE 14113553 1411267527 blood esc 2011-12-30T13:32:07.083 2012-11-15T17:05:17.537 2014-05-31T01:36:01.113 202 GSM854411 SRR393768.bw K-562 truseq 30ng c("cell type: immortalised chronic myelogenous leukemia (CML)", "cell line: K562", "sample type: K-562 truseq 30ng", "average insert size: 235", "std. dev. insert size: 173.524507") SRP010061 SRS284484 SRX113652 SRR393766 15506610 0 0 TRUE FALSE 0 NA blood esc 2011-12-30T13:32:07.050 2012-11-15T17:05:17.447 2014-05-31T01:36:00.730 202 GSM854409 NA K-562 truseq 100ng c("cell type: immortalised chronic myelogenous leukemia (CML)", "cell line: K562", "sample type: K-562 truseq 100ng", "average insert size: 237", "std. dev. insert size: 179.351572")