project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP012546 SRS311220 SRX144677 SRR491337 2359380 2359380 1 FALSE FALSE 1185749 32374595 brain cortex 2012-05-08T11:24:29.120 2012-06-21T14:05:09.790 2014-03-06T14:52:30.796 35 GSM923251 SRR491337.bw NRC 30K1R_s5_AAGCCC c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311221 SRX144678 SRR491338 1783565 1783565 1 FALSE FALSE 543052 13958286 brain cortex 2012-05-08T11:24:29.207 2012-06-21T14:05:09.967 2014-03-06T14:52:30.844 35 GSM923252 SRR491338.bw NRC 30K1R_s5_CCCCTT c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311222 SRX144679 SRR491339 3551323 3551323 1 FALSE FALSE 639924 15472760 brain cortex 2012-05-08T11:24:29.270 2012-06-21T14:05:10.023 2014-03-06T14:52:30.881 35 GSM923253 SRR491339.bw NRC 42T2V_s1_AAGCCC c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311223 SRX144680 SRR491340 2068271 2068271 1 FALSE FALSE 396150 9700501 brain cortex 2012-05-08T11:24:29.313 2012-06-21T14:05:10.070 2014-03-06T14:52:30.918 35 GSM923254 SRR491340.bw NRC 42T2V_s1_CCCCTT c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311224 SRX144681 SRR491341 42357 42357 1 FALSE FALSE 10815 317716 brain cortex 2012-05-08T11:24:29.357 2012-06-21T14:05:10.120 2014-03-06T14:52:30.953 35 GSM923255 SRR491341.bw NRC 42T2V_s2_AAGCCC c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311225 SRX144682 SRR491342 2160158 2160158 1 FALSE FALSE 73029 1719818 brain cortex 2012-05-08T11:24:29.400 2012-06-21T14:05:10.173 2014-03-06T14:52:31.019 35 GSM923256 SRR491342.bw NRC 42T2V_s2_CCCCTT c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311226 SRX144683 SRR491343 386683 386683 1 FALSE FALSE 82647 2389734 brain cortex 2012-05-08T11:24:29.440 2012-06-21T14:05:10.260 2014-03-06T14:52:31.056 50 GSM923257 SRR491343.bw NRC 42T2Y_s5_AAGCCC c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311227 SRX144684 SRR491344 138510 138510 1 FALSE FALSE 15881 407890 brain cortex 2012-05-08T11:24:29.483 2012-06-21T14:05:10.300 2014-03-06T14:52:31.093 50 GSM923258 SRR491344.bw NRC 42T2Y_s5_CCCCTT c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311228 SRX144685 SRR491345 507777 507777 1 FALSE FALSE 42855 1089784 brain cortex 2012-05-08T11:24:29.537 2012-06-21T14:05:10.383 2014-03-06T14:52:31.130 50 GSM923259 SRR491345.bw NRC 42T2Y_s5_TCGTTG c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311229 SRX144686 SRR491346 1282817 1282817 1 FALSE FALSE 369397 9528445 brain cortex 2012-05-08T11:24:29.580 2012-06-21T14:05:10.430 2014-03-06T14:52:31.163 50 GSM923260 SRR491346.bw NRC 42T2Y_s6_CACACC c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311230 SRX144687 SRR491347 934372 934372 1 FALSE FALSE 47278 1228895 brain cortex 2012-05-08T11:24:29.623 2012-06-21T14:05:10.497 2014-03-06T14:52:31.210 50 GSM923261 SRR491347.bw NRC 42T2Y_s6_CATCGG c("tumor group: NRC", "tissue: non-tumoral renal cortex") SRP012546 SRS311231 SRX144688 SRR491348 1706032 1706032 1 FALSE FALSE 528893 13928247 kidney esc 2012-05-08T11:24:29.667 2012-06-21T14:05:10.567 2014-03-06T14:52:31.245 35 GSM923262 SRR491348.bw RCC recurrence 30K1R_s5_CATCGG c("tumor group: RCC recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma recurrence") SRP012546 SRS311232 SRX144689 SRR491349 2262756 2262756 1 FALSE FALSE 587575 15031751 kidney esc 2012-05-08T11:24:29.757 2012-06-21T14:05:10.633 2014-03-06T14:52:31.308 35 GSM923263 SRR491349.bw RCC recurrence 30K1R_s5_TCGTTG c("tumor group: RCC recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma recurrence") SRP012546 SRS311233 SRX144690 SRR491350 3663413 3663413 1 FALSE FALSE 572641 13300139 kidney esc 2012-05-08T11:24:29.803 2012-06-21T14:05:10.713 2014-03-06T14:52:31.347 35 GSM923264 SRR491350.bw RCC recurrence 42T2V_s1_CACACC c("tumor group: RCC recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma recurrence") SRP012546 SRS311234 SRX144691 SRR491351 964213 964213 1 FALSE FALSE 138457 3519159 kidney esc 2012-05-08T11:24:29.847 2012-06-21T14:05:10.780 2014-03-06T14:52:31.386 50 GSM923265 SRR491351.bw RCC recurrence 42T2Y_s6_AAGCCC c("tumor group: RCC recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma recurrence") SRP012546 SRS311235 SRX144692 SRR491352 3539320 3539320 1 FALSE FALSE 1387366 35462679 kidney esc 2012-05-08T11:24:29.893 2012-06-21T14:05:10.830 2014-03-06T14:52:31.424 35 GSM923266 SRR491352.bw RCC recurrence 4306M_s7_AAGCCC c("tumor group: RCC recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma recurrence") SRP012546 SRS311236 SRX144693 SRR491353 1834985 1834985 1 FALSE FALSE 647496 16668923 kidney esc 2012-05-08T11:24:29.940 2012-06-21T14:05:10.887 2014-03-06T14:52:31.459 35 GSM923267 SRR491353.bw RCC recurrence 4306M_s7_CACACC c("tumor group: RCC recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma recurrence") SRP012546 SRS311237 SRX144694 SRR491354 746411 746411 1 FALSE FALSE 294858 7647133 kidney esc 2012-05-08T11:24:29.987 2012-06-21T14:05:10.937 2014-03-06T14:52:31.499 35 GSM923268 SRR491354.bw RCC recurrence 4306M_s7_CATCGG c("tumor group: RCC recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma recurrence") SRP012546 SRS311238 SRX144695 SRR491355 8131820 8131820 1 FALSE FALSE 4773513 117308604 kidney esc 2012-05-08T11:24:30.040 2012-06-21T14:05:10.987 2014-03-06T14:52:31.530 35 GSM923269 SRR491355.bw RCC recurrence 4306M_s7_CCCCTT c("tumor group: RCC recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma recurrence") SRP012546 SRS311239 SRX144696 SRR491356 1337635 1337635 1 FALSE FALSE 694506 19557064 kidney esc 2012-05-08T11:24:30.087 2012-06-21T14:05:11.037 2014-03-06T14:52:31.563 35 GSM923270 SRR491356.bw RCC stage IV 30K1R_s5_CACACC c("tumor group: RCC stage IV", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma stage IV") SRP012546 SRS311240 SRX144697 SRR491357 4587786 4587786 1 FALSE FALSE 1116233 29682337 kidney esc 2012-05-08T11:24:30.137 2012-06-21T14:05:11.097 2014-03-06T14:52:31.595 35 GSM923271 SRR491357.bw RCC stage IV 42T2V_s1_CATCGG c("tumor group: RCC stage IV", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma stage IV") SRP012546 SRS311241 SRX144698 SRR491358 3719357 3719357 1 FALSE FALSE 74241 1912722 kidney esc 2012-05-08T11:24:30.187 2012-06-21T14:05:11.157 2014-03-06T14:52:31.629 35 GSM923272 SRR491358.bw RCC stage IV 42T2V_s1_TCGTTG c("tumor group: RCC stage IV", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma stage IV") SRP012546 SRS311242 SRX144699 SRR491359 3546232 3546232 1 FALSE FALSE 961173 24958790 kidney esc 2012-05-08T11:24:30.233 2012-06-21T14:05:11.210 2014-03-06T14:52:31.664 35 GSM923273 SRR491359.bw RCC stage IV 4306M_s7_TCGTTG c("tumor group: RCC stage IV", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma stage IV") SRP012546 SRS311243 SRX144700 SRR491360 1896887 1896887 1 FALSE FALSE 718027 20212415 kidney esc 2012-05-08T11:24:30.280 2012-06-21T14:05:11.263 2014-03-06T14:52:31.700 35 GSM923274 SRR491360.bw RCC stage IV 4306M_s8_AAGCCC c("tumor group: RCC stage IV", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma stage IV") SRP012546 SRS311244 SRX144701 SRR491361 2246442 2246442 1 FALSE FALSE 223385 5999153 kidney esc 2012-05-08T11:24:30.327 2012-06-21T14:05:11.317 2014-03-06T14:52:31.737 35 GSM923275 SRR491361.bw RCC stage IV 4306M_s8_CACACC c("tumor group: RCC stage IV", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma stage IV") SRP012546 SRS311245 SRX144702 SRR491362 1340295 1340295 1 FALSE FALSE 648492 16761424 kidney esc 2012-05-08T11:24:30.370 2012-06-21T14:05:11.363 2014-03-06T14:52:31.774 35 GSM923276 SRR491362.bw RCC stage IV 4306M_s8_CCCCTT c("tumor group: RCC stage IV", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma stage IV") SRP012546 SRS311246 SRX144703 SRR491363 6381213 6381213 1 FALSE FALSE 1012979 25838531 kidney esc 2012-05-08T11:24:30.417 2012-06-21T14:05:11.410 2014-03-06T14:52:31.809 35 GSM923277 SRR491363.bw RCC without recurrence 42T2V_s2_CACACC c("tumor group: RCC without recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma without recurrence") SRP012546 SRS311247 SRX144704 SRR491364 4445364 4445364 1 FALSE FALSE 165499 4199623 kidney esc 2012-05-08T11:24:30.463 2012-06-21T14:05:11.470 2014-03-06T14:52:31.846 35 GSM923278 SRR491364.bw RCC without recurrence 42T2V_s2_CATCGG c("tumor group: RCC without recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma without recurrence") SRP012546 SRS311248 SRX144705 SRR491365 3007269 3007269 1 FALSE FALSE 387133 9827618 kidney esc 2012-05-08T11:24:30.507 2012-06-21T14:05:11.520 2014-03-06T14:52:31.879 35 GSM923279 SRR491365.bw RCC without recurrence 42T2V_s2_TCGTTG c("tumor group: RCC without recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma without recurrence") SRP012546 SRS311249 SRX144706 SRR491366 905314 905314 1 FALSE FALSE 284184 7363263 kidney esc 2012-05-08T11:24:30.580 2012-06-21T14:05:11.590 2014-03-06T14:52:31.916 50 GSM923280 SRR491366.bw RCC without recurrence 42T2Y_s5_CACACC c("tumor group: RCC without recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma without recurrence") SRP012546 SRS311250 SRX144707 SRR491367 455751 455751 1 FALSE FALSE 29666 692913 kidney esc 2012-05-08T11:24:30.627 2012-06-21T14:05:11.640 2014-03-06T14:52:31.947 50 GSM923281 SRR491367.bw RCC without recurrence 42T2Y_s5_CATCGG c("tumor group: RCC without recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma without recurrence") SRP012546 SRS311251 SRX144708 SRR491368 172708 172708 1 FALSE FALSE 20305 507534 kidney esc 2012-05-08T11:24:30.670 2012-06-21T14:05:11.693 2014-03-06T14:52:31.980 50 GSM923282 SRR491368.bw RCC without recurrence 42T2Y_s6_CCCCTT c("tumor group: RCC without recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma without recurrence") SRP012546 SRS311252 SRX144709 SRR491369 1776680 1776680 1 FALSE FALSE 123781 3017556 kidney esc 2012-05-08T11:24:30.730 2012-06-21T14:05:11.750 2014-03-06T14:52:32.012 50 GSM923283 SRR491369.bw RCC without recurrence 42T2Y_s6_TCGTTG c("tumor group: RCC without recurrence", "tissue: clear cell renal cell carcinoma", "disease state: clear cell renal cell carcinoma without recurrence") SRP012546 SRS311253 SRX144710 SRR491370 1169322 1169322 1 FALSE FALSE 425470 10434586 brain esc 2012-05-08T11:24:30.790 2012-06-21T14:05:11.807 2014-03-06T14:52:32.047 35 GSM923284 SRR491370.bw SKRC7 4306M_s8_CATCGG c("tumor group: SKRC7", "cell line: SKRC7") SRP012546 SRS311254 SRX144711 SRR491371 4647944 4647944 1 FALSE FALSE 1497768 39608961 brain esc 2012-05-08T11:24:30.853 2012-06-21T14:05:11.853 2014-03-06T14:52:32.100 35 GSM923285 SRR491371.bw MZ1257 4306M_s8_TCGTTG c("tumor group: MZ1257", "cell line: MZ1257")