project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP017631 SRS381043 SRX212178 SRR639050 83449629 83449629 1 FALSE FALSE 80133969 3273212071 lung imr90 2012-12-20T14:05:08.193 2013-10-20T01:30:57.820 2014-03-06T16:47:25.028 43 GSM1055806 SRR639050.bw Gro-Seq IMR90 c("treatment: no treat", "experiment: GRO-seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS381044 SRX212179 SRR639051 91823343 91823343 1 FALSE FALSE 88606994 3506180556 lung imr90 2012-12-20T14:05:08.287 2013-10-20T01:31:16.563 2014-03-06T16:47:25.071 43 GSM1055807 SRR639051.bw Gro-Seq IMR90+TNF-α c("treatment: TNF-α (10ng/mL) 1hr", "experiment: GRO-seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435909 SRX294956 SRR882006 129250125 129250125 1 FALSE FALSE 116990928 4143925572 lung imr90 2013-06-05T09:30:14.970 2013-10-20T01:16:11.047 2014-03-07T14:16:24.531 36 GSM1154029 SRR882006.bw RNA-Seq IMR90 c("treatment: no treat", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435910 SRX294957 SRR882007 132837160 132837160 1 FALSE FALSE 104323624 3695702639 lung imr90 2013-06-05T09:30:16.147 2013-10-20T01:15:51.977 2014-03-07T14:16:24.555 36 GSM1154030 SRR882007.bw RNA-Seq IMR90+TNF-α c("treatment: TNF-α (10ng/mL) 1hr", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435913 SRX294958 SRR882008 50373491 50373491 1 FALSE FALSE 48551747 2333460190 lung imr90 2013-06-05T09:30:29.337 2013-10-20T01:16:15.890 2014-03-07T14:16:24.577 50 GSM1154031 SRR882008.bw RNA-Seq IMR90 with CHX c("treatment: cycloheximide (5µg/mL) pretreat 30min", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435914 SRX294959 SRR882009 40130251 40130251 1 FALSE FALSE 38745654 1869958959 lung imr90 2013-06-05T09:30:30.430 2013-10-20T01:16:18.260 2014-03-07T14:16:24.606 50 GSM1154032 SRR882009.bw RNA-Seq IMR90+TNF-α with CHX c("treatment: TNF-α (10ng/mL) 1hr; cycloheximide (5µg/mL) pretreat 30min", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435915 SRX294960 SRR882010 68416280 68416280 1 FALSE FALSE 66249897 3225481234 lung imr90 2013-06-05T09:30:31.490 2013-10-20T01:15:54.497 2014-03-07T14:16:24.628 50 GSM1154033 SRR882010.bw RNA-Seq IMR90+IFN-γ 0hr c("treatment: no treat", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435916 SRX294961 SRR882011 56808409 56808409 1 FALSE FALSE 54930866 2659184918 lung imr90 2013-06-05T09:30:32.733 2013-10-20T01:16:29.730 2014-03-07T14:16:24.650 50 GSM1154034 SRR882011.bw RNA-Seq IMR90+IFN-γ 2hr c("treatment: TNF-α (10ng/mL) 1hr", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435917 SRX294962 SRR882012 51631571 51631571 1 FALSE FALSE 50269655 2426053430 blood vessel huvec 2013-06-05T09:30:33.810 2013-10-20T01:16:21.167 2014-03-07T14:16:24.676 50 GSM1154035 SRR882012.bw RNA-Seq HUVEC c("treatment: no treat", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435918 SRX294963 SRR882013 47867746 47867746 1 FALSE FALSE 46712863 2266755284 blood vessel huvec 2013-06-05T09:30:34.920 2013-10-20T01:15:56.580 2014-03-07T14:16:24.703 50 GSM1154036 SRR882013.bw RNA-Seq HUVEC+TNF-α c("treatment: IFN-γ (50ng/mL) 2hr", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435919 SRX294964 SRR882014 42123222 42123222 1 FALSE FALSE 40342637 1925935399 prostate lncap 2013-06-05T09:30:36.113 2013-10-20T01:16:44.457 2014-03-07T14:16:24.725 50 GSM1154037 SRR882014.bw RNA-Seq LNCaP c("treatment: no treat", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435920 SRX294965 SRR882015 29678841 29678841 1 FALSE FALSE 28234313 1340512419 prostate lncap 2013-06-05T09:30:37.173 2013-10-20T01:16:31.837 2014-03-07T14:16:24.746 50 GSM1154038 SRR882015.bw RNA-Seq LNCaP + DHT c("treatment: 5α-dihydrotestosterone (100nM) 4hr", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435921 SRX294966 SRR882016 59060152 59060152 1 FALSE FALSE 56811101 2728953766 breast mcf 2013-06-05T09:30:38.257 2013-10-20T01:16:23.803 2014-03-07T14:16:24.771 50 GSM1154039 SRR882016.bw RNA-Seq MCF7 c("treatment: no treat", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no") SRP017631 SRS435922 SRX294967 SRR882017 45669530 45669530 1 FALSE FALSE 43947694 2107166952 breast mcf 2013-06-05T09:30:39.350 2013-10-20T01:17:26.933 2014-03-07T14:16:24.801 50 GSM1154040 SRR882017.bw RNA-Seq MCF7 + E2 c("treatment: β-estradiol (100nM) 160min", "experiment: RNA-Seq", "antibody: no", "restriction enzyme: no")