project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP017959 SRS386063 SRX217680 SRR649360 19508676 19508676 1 FALSE FALSE 17373809 1229250993 brain leukemia 2013-01-15T18:05:15.197 2014-01-19T00:44:03.353 2014-09-07T01:11:15.313 76 GSM1064822 SRR649360.bw hsa br M 2ss [batch1] c("Sex: male", "strain: NA", "age: adult, 48 years", "extract_protocol: Illumina GAIIx, strand-specific", "library-type (for tophat and cufflinks): fr-secondstrand") SRP017959 SRS386064 SRX217681 SRR649361 38402147 38402147 1 FALSE FALSE 38276762 2797542776 brain leukemia 2013-01-15T18:05:16.340 2014-01-19T00:44:03.490 2014-09-07T01:11:16.463 75 GSM1064824 SRR649361.bw hsa br M7 [batch1] c("Sex: male", "strain: NA", "age: adult", "extract_protocol: Illumina GAIIx, strand-specific", "library-type (for tophat and cufflinks): fr-secondstrand") SRP017959 SRS386065 SRX217682 SRR649362 40098100 40098100 1 FALSE FALSE 39937769 2924772851 testis cerebellum 2013-01-15T18:05:16.440 2014-01-19T00:44:03.547 2014-09-07T01:11:16.757 75 GSM1064826 SRR649362.bw hsa ts M3 [batch1] c("Sex: male", "strain: NA", "age: adult, 51 years", "extract_protocol: Illumina GAIIx, strand-specific", "library-type (for tophat and cufflinks): fr-secondstrand") SRP017959 SRS386066 SRX217683 SRR649363 38536824 38536824 1 FALSE FALSE 38482704 2824174838 placenta leukemia 2013-01-15T18:05:16.517 2014-01-19T00:44:03.590 2014-09-07T01:11:17.067 76 GSM1064828 SRR649363.bw hsa pl M1 [batch1] c("Sex: male", "strain: NA", "age: embryo, 13 weeks post-conception", "extract_protocol: Illumina GAIIx, strand-specific", "library-type (for tophat and cufflinks): fr-secondstrand") SRP017959 SRS386067 SRX217684 SRR649364 39001717 39001717 1 FALSE FALSE 38887405 2834885402 ovary cerebellum 2013-01-15T18:05:16.603 2014-01-19T00:44:03.640 2014-09-07T01:11:18.183 75 GSM1064829 SRR649364.bw hsa ov F1 [batch1] c("Sex: female", "strain: NA", "age: adult, 47 years", "extract_protocol: Illumina GAIIx, strand-specific", "library-type (for tophat and cufflinks): fr-secondstrand") SRP017959 SRS464356 SRX328074 SRR943339 46939560 46939560 1 TRUE FALSE 29374218 2739811138 brain leukemia 2013-07-26T12:11:07.117 2014-01-19T00:44:05.370 2014-09-07T01:20:19.777 202 GSM1196040 SRR943339.bw hsa br M 8 [batch2] c("Sex: male", "strain: NA", "age: adult", "extract_protocol: Illumina GAII, non strand-specific", "library-type (for tophat and cufflinks): fr-unstranded") SRP017959 SRS464357 SRX328076 SRR943341 31197675 31197675 1 FALSE FALSE 30589817 3059462516 ovary cerebellum 2013-07-26T12:11:21.540 2014-01-19T00:44:05.720 2014-09-07T01:20:20.000 101 GSM1196045 SRR943341.bw hsa ov F 3 [batch2] c("Sex: female", "strain: NA", "age: NA (pool of individuals)", "extract_protocol: Illumina HiSeq 2000, strand-specific", "library-type (for tophat and cufflinks): fr-firststrand") SRP017959 SRS464358 SRX328075 SRR943340 19688618 19688618 1 FALSE FALSE 19322336 1924706458 placenta leukemia 2013-07-26T12:11:24.417 2014-01-19T00:44:05.813 2014-09-07T01:20:20.490 101 GSM1196044 SRR943340.bw hsa pl I 4 [batch2] c("Sex: female", "strain: NA", "age: 42 weeks post-conception", "extract_protocol: Illumina HiSeq 2000, strand-specific", "library-type (for tophat and cufflinks): fr-firststrand") SRP017959 SRS464371 SRX328089 SRR943354 23436159 23436159 1 FALSE FALSE 16653505 492206750 placenta leukemia 2013-07-26T12:12:13.120 2014-01-19T00:44:06.787 2014-01-19T01:13:25.053 101 GSM1196058 SRR943354.bw hsa pl I 1 smallRNA [batch2] c("Sex: male", "strain: NA", "age: 13 weeks post-conception", "extract_protocol: Illumina HiSeq 2000, strand-specific") SRP017959 SRS464374 SRX328092 SRR943357 43471036 43471036 1 TRUE FALSE 39831570 3755004341 brain leukemia 2013-07-26T12:11:13.653 2014-01-19T00:44:05.533 2014-09-07T01:20:25.013 202 GSM1196041 SRR943357.bw hsa br M 9 [batch2] c("Sex: male", "strain: NA", "age: adult", "extract_protocol: Illumina GAII, non strand-specific", "library-type (for tophat and cufflinks): fr-unstranded") SRP017959 SRS464375 SRX328094 SRR943359 23872807 23872807 1 FALSE FALSE 23362469 2330363744 placenta leukemia 2013-07-26T12:11:10.917 2014-01-19T00:44:05.483 2014-09-07T01:20:25.373 101 GSM1196043 SRR943359.bw hsa pl I 3 [batch2] c("Sex: male", "strain: NA", "age: 42 weeks post-conception", "extract_protocol: Illumina HiSeq 2000, strand-specific", "library-type (for tophat and cufflinks): fr-firststrand") SRP017959 SRS464376 SRX328093 SRR943358 30490588 30490588 1 TRUE FALSE 28429372 2771588596 brain leukemia 2013-07-26T12:11:15.950 2014-01-19T00:44:05.603 2014-09-07T01:20:25.703 202 GSM1196042 SRR943358.bw hsa br M 10 [batch2] c("Sex: male", "strain: NA", "age: adult", "extract_protocol: Illumina GAII, non strand-specific", "library-type (for tophat and cufflinks): fr-unstranded")