project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP028180 SRS463762 SRX327380 SRR942541 17125822 17125822 1 FALSE FALSE 14871293 511394472 lung imr90 2013-07-23T18:40:14.413 2014-07-04T01:34:06.783 2014-07-04T01:39:16.217 36 GSM1194676 SRR942541.bw Patient 1 normal 1 c("patient: Patient 1", "pathology: Normal", "cell type: Normal basal cells") SRP028180 SRS463763 SRX327381 SRR942542 15977880 15977880 1 FALSE FALSE 13120063 450351073 lung imr90 2013-07-23T18:40:06.600 2014-07-04T01:34:11.533 2014-07-04T01:39:17.263 36 GSM1194677 SRR942542.bw Patient 1 normal 2 c("patient: Patient 1", "pathology: Normal", "cell type: Normal basal cells") SRP028180 SRS463764 SRX327382 SRR942543 18281944 18281944 1 FALSE FALSE 15265266 525668476 lung imr90 2013-07-23T18:40:09.173 2014-07-04T01:34:19.300 2014-07-04T01:39:18.143 36 GSM1194678 SRR942543.bw Patient 1 normal 4 c("patient: Patient 1", "pathology: Normal", "cell type: Normal basal cells") SRP028180 SRS463765 SRX327383 SRR942544 19984712 19984712 1 FALSE FALSE 18172898 626718248 lung imr90 2013-07-23T18:40:10.247 2014-07-04T01:34:24.733 2014-07-04T01:39:19.083 36 GSM1194679 SRR942544.bw Patient 1 premalignant 1 c("patient: Patient 1", "pathology: Premalignant", "tissue: Premalignant lesion") SRP028180 SRS463766 SRX327384 SRR942545 19249684 19249684 1 FALSE FALSE 15995707 551790676 lung imr90 2013-07-23T18:40:08.057 2014-07-04T01:34:29.870 2014-07-04T01:39:19.713 36 GSM1194680 SRR942545.bw Patient 1 tumor 1 c("patient: Patient 1", "pathology: Tumor", "tissue: Squamous cell carcinoma") SRP028180 SRS463767 SRX327385 SRR942546 26594428 26594428 1 FALSE FALSE 25027403 865835430 lung imr90 2013-07-23T18:40:11.330 2014-07-04T01:34:37.590 2014-07-04T01:40:13.470 36 GSM1194681 SRR942546.bw Patient 1 tumor 2 c("patient: Patient 1", "pathology: Tumor", "tissue: Squamous cell carcinoma") SRP028180 SRS463768 SRX327386 SRR942547 33310024 33310024 1 FALSE FALSE 20014253 664280616 lung imr90 2013-07-23T18:40:15.487 2014-07-04T01:34:45.527 2014-07-04T01:40:13.783 35 GSM1194682 SRR942547.bw Patient 2 normal 1 c("patient: Patient 2", "pathology: Normal", "cell type: Normal basal cells") SRP028180 SRS463769 SRX327387 SRR942548 25274968 25274968 1 FALSE FALSE 22190183 737717467 lung imr90 2013-07-23T18:40:12.367 2014-07-04T01:34:52.967 2014-07-04T01:40:14.160 35 GSM1194683 SRR942548.bw Patient 2 premalignant 1 c("patient: Patient 2", "pathology: Premalignant", "tissue: Premalignant lesion") SRP028180 SRS463770 SRX327388 SRR942549 29689509 29689509 1 FALSE FALSE 25776532 863425407 lung imr90 2013-07-23T18:40:13.393 2014-07-04T01:35:02.593 2014-07-04T01:40:14.437 35 GSM1194684 SRR942549.bw Patient 2 premalignant 2 c("patient: Patient 2", "pathology: Premalignant", "tissue: Premalignant lesion") SRP028180 SRS463771 SRX327389 SRR942550 30686508 30686508 1 FALSE FALSE 27147871 910658124 lung imr90 2013-07-23T18:40:16.607 2014-07-04T01:35:07.863 2014-07-04T01:40:14.650 35 GSM1194685 SRR942550.bw Patient 2 tumor 1 c("patient: Patient 2", "pathology: Tumor", "tissue: Squamous cell carcinoma") SRP028180 SRS463772 SRX327390 SRR942551 20785936 20785936 1 FALSE FALSE 17828510 594195499 lung imr90 2013-07-23T18:40:17.673 2014-07-04T01:08:40.737 2014-07-04T01:11:15.340 35 GSM1194686 SRR942551.bw Patient 2 tumor 3 c("patient: Patient 2", "pathology: Tumor", "tissue: Squamous cell carcinoma") SRP028180 SRS463773 SRX327391 SRR942552 101119997 101119997 1 FALSE FALSE 85550865 4109198071 lung imr90 2013-07-23T18:40:18.710 2014-07-04T01:08:47.660 2014-07-04T01:11:15.693 50 GSM1194687 SRR942552.bw Patient 3 normal 1 c("patient: Patient 3", "pathology: Normal", "cell type: Normal basal cells") SRP028180 SRS463774 SRX327392 SRR942553 118480263 118480263 1 FALSE FALSE 101728174 4908427558 lung imr90 2013-07-23T18:40:22.973 2014-07-04T01:08:54.653 2014-07-04T01:12:13.540 50 GSM1194688 SRR942553.bw Patient 3 premalignant 1 c("patient: Patient 3", "pathology: Premalignant", "tissue: Premalignant lesion") SRP028180 SRS463775 SRX327393 SRR942554 113755908 113755908 1 FALSE FALSE 105552261 5079230366 lung imr90 2013-07-23T18:40:19.743 2014-07-04T01:09:04.730 2014-07-04T01:12:13.843 50 GSM1194689 SRR942554.bw Patient 3 premalignant 2 c("patient: Patient 3", "pathology: Premalignant", "tissue: Premalignant lesion") SRP028180 SRS463776 SRX327394 SRR942555 114691777 114691777 1 FALSE FALSE 94078496 4526176515 lung imr90 2013-07-23T18:40:20.870 2014-07-04T01:09:10.980 2014-07-04T01:12:14.110 50 GSM1194690 SRR942555.bw Patient 3 tumor 1 c("patient: Patient 3", "pathology: Tumor", "tissue: Squamous cell carcinoma") SRP028180 SRS463777 SRX327395 SRR942556 109929215 109929215 1 FALSE FALSE 87566779 4237090322 lung imr90 2013-07-23T18:40:25.360 2014-07-04T01:09:17.903 2014-07-04T01:12:14.407 50 GSM1194691 SRR942556.bw Patient 3 tumor 2 c("patient: Patient 3", "pathology: Tumor", "tissue: Squamous cell carcinoma") SRP028180 SRS463778 SRX327396 SRR942557 114469549 114469549 1 FALSE FALSE 101095699 4882133470 lung imr90 2013-07-23T18:40:21.947 2014-07-04T01:09:24.593 2014-07-04T01:12:14.717 50 GSM1194692 SRR942557.bw Patient 3 tumor 3 c("patient: Patient 3", "pathology: Tumor", "tissue: Squamous cell carcinoma") SRP028180 SRS463779 SRX327397 SRR942558 103568098 103568098 1 FALSE FALSE 100866458 4892199782 lung imr90 2013-07-23T18:40:24.200 2014-07-04T01:09:31.070 2014-07-04T01:12:14.987 50 GSM1194693 SRR942558.bw Patient 4 normal 1 c("patient: Patient 4", "pathology: Normal", "cell type: Normal basal cells") SRP028180 SRS463780 SRX327398 SRR942559 131179292 131179292 1 FALSE FALSE 122314771 5881355022 lung imr90 2013-07-23T18:40:31.640 2014-07-04T01:09:41.077 2014-07-04T01:12:15.253 50 GSM1194694 SRR942559.bw Patient 4 normal 2 c("patient: Patient 4", "pathology: Normal", "cell type: Normal basal cells") SRP028180 SRS463781 SRX327399 SRR942560 128758704 128758704 1 FALSE FALSE 125502646 6074230360 lung imr90 2013-07-23T18:40:32.720 2014-07-04T01:09:48.020 2014-07-04T01:12:15.523 50 GSM1194695 SRR942560.bw Patient 4 premalignant 1 c("patient: Patient 4", "pathology: Premalignant", "tissue: Premalignant lesion") SRP028180 SRS463782 SRX327400 SRR942561 107210554 107210554 1 FALSE FALSE 104766516 5061581220 lung imr90 2013-07-23T18:40:27.540 2014-07-04T01:09:54.420 2014-07-04T01:12:15.770 50 GSM1194696 SRR942561.bw Patient 4 premalignant 2 c("patient: Patient 4", "pathology: Premalignant", "tissue: Premalignant lesion") SRP028180 SRS463783 SRX327401 SRR942562 77839601 77839601 1 FALSE FALSE 76930608 3707030122 lung imr90 2013-07-23T18:40:30.323 2014-07-04T01:10:04.937 2014-07-04T01:12:16.050 50 GSM1194697 SRR942562.bw Patient 4 tumor 1 c("patient: Patient 4", "pathology: Tumor", "tissue: Squamous cell carcinoma") SRP028180 SRS463784 SRX327402 SRR942563 100645559 100645559 1 FALSE FALSE 99652002 4829485562 lung imr90 2013-07-23T18:40:26.450 2014-07-04T01:11:50.343 2014-07-04T01:16:13.360 50 GSM1194698 SRR942563.bw Patient 4 tumor 2 c("patient: Patient 4", "pathology: Tumor", "tissue: Squamous cell carcinoma") SRP028180 SRS463785 SRX327403 SRR942564 129113308 129113308 1 FALSE FALSE 127924216 6229340014 lung imr90 2013-07-23T18:40:29.253 2014-07-04T01:12:00.193 2014-07-04T01:16:13.663 50 GSM1194699 SRR942564.bw Patient 4 tumor 3 c("patient: Patient 4", "pathology: Tumor", "tissue: Squamous cell carcinoma")