project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP028887 SRS471163 SRX336156 SRR953488 28123439 28123439 1 FALSE FALSE 27483203 1043044813 breast mcf 2013-08-18T16:11:03.820 2013-12-06T01:23:53.817 2014-03-07T15:18:17.638 101 GSM1207878 SRR953488.bw MCF7 profiling library 1 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS471163 SRX336156 SRR953489 23648816 23648816 1 FALSE FALSE 23144403 834434026 breast mcf 2013-08-18T16:11:03.820 2013-12-06T01:23:53.817 2014-03-07T15:18:17.638 100 GSM1207878 SRR953489.bw MCF7 profiling library 1 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS471164 SRX336157 SRR953490 1142739 1142739 1 FALSE FALSE 1136051 44677188 breast mcf 2013-08-18T16:11:05.257 2013-12-06T01:24:01.493 2014-03-07T15:18:17.673 101 GSM1207879 SRR953490.bw MCF7 profiling library 2 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS471164 SRX336157 SRR953491 6283895 6283895 1 FALSE FALSE 2436194 65743075 breast mcf 2013-08-18T16:11:05.257 2013-12-06T01:24:01.493 2014-03-07T15:18:17.673 51 GSM1207879 SRR953491.bw MCF7 profiling library 2 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS471164 SRX336157 SRR953492 4193352 4193352 1 FALSE FALSE 4109070 145265854 breast mcf 2013-08-18T16:11:05.257 2013-12-06T01:24:01.493 2014-03-07T15:18:17.673 100 GSM1207879 SRR953492.bw MCF7 profiling library 2 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS471164 SRX336157 SRR953493 4551179 4551179 1 FALSE FALSE 4465461 163542853 breast mcf 2013-08-18T16:11:05.257 2013-12-06T01:24:01.493 2014-03-07T15:18:17.673 100 GSM1207879 SRR953493.bw MCF7 profiling library 2 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS471164 SRX336157 SRR953494 237438 237438 1 FALSE FALSE 235969 9211247 breast mcf 2013-08-18T16:11:05.257 2013-12-06T01:24:01.493 2014-03-07T15:18:17.673 101 GSM1207879 SRR953494.bw MCF7 profiling library 2 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS471164 SRX336157 SRR953495 1374915 1374915 1 FALSE FALSE 553832 14822573 breast mcf 2013-08-18T16:11:05.257 2013-12-06T01:24:01.493 2014-03-07T15:18:17.673 51 GSM1207879 SRR953495.bw MCF7 profiling library 2 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS471164 SRX336157 SRR953496 890241 890241 1 FALSE FALSE 871674 31316374 breast mcf 2013-08-18T16:11:05.257 2013-12-06T01:24:01.493 2014-03-07T15:18:17.673 100 GSM1207879 SRR953496.bw MCF7 profiling library 2 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS471164 SRX336157 SRR953497 979902 979902 1 FALSE FALSE 960728 34723681 breast mcf 2013-08-18T16:11:05.257 2013-12-06T01:24:01.493 2014-03-07T15:18:17.673 100 GSM1207879 SRR953497.bw MCF7 profiling library 2 c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS504583 SRX380125 SRR1033457 12619145 12619145 1 FALSE FALSE 12021754 1705822997 kidney hek 2013-11-19T16:40:06.397 2013-12-06T01:23:28.960 2014-03-07T16:11:47.814 151 GSM1269464 SRR1033457.bw HEK293 4suRNA c("cell line: HEK293", "purification: oligo(dT) beads", "sample type: 4SU-labeled RNA") SRP028887 SRS504583 SRX380125 SRR1033458 14628281 14628281 1 FALSE FALSE 13951039 1975058801 kidney hek 2013-11-19T16:40:06.397 2013-12-06T01:23:28.960 2014-03-07T16:11:47.814 151 GSM1269464 SRR1033458.bw HEK293 4suRNA c("cell line: HEK293", "purification: oligo(dT) beads", "sample type: 4SU-labeled RNA") SRP028887 SRS504584 SRX380127 SRR1033461 11553317 11553317 1 FALSE FALSE 11182640 1591259126 kidney hek 2013-11-19T16:40:04.947 2013-12-06T01:23:39.957 2014-03-07T16:11:47.773 151 GSM1269466 SRR1033461.bw HEK293 total RNA c("cell line: HEK293", "purification: oligo(dT) beads", "sample type: input or total RNA") SRP028887 SRS504584 SRX380127 SRR1033462 14808837 14808837 1 FALSE FALSE 14274752 2035174400 kidney hek 2013-11-19T16:40:04.947 2013-12-06T01:23:39.957 2014-03-07T16:11:47.773 151 GSM1269466 SRR1033462.bw HEK293 total RNA c("cell line: HEK293", "purification: oligo(dT) beads", "sample type: input or total RNA") SRP028887 SRS504585 SRX380126 SRR1033459 11693030 11693030 1 FALSE FALSE 11314569 1601632628 kidney hek 2013-11-19T16:40:08.220 2013-12-06T01:23:24.197 2014-03-07T16:11:47.848 151 GSM1269465 SRR1033459.bw HEK293 flow-through c("cell line: HEK293", "purification: oligo(dT) beads", "sample type: non-labeled RNA") SRP028887 SRS504585 SRX380126 SRR1033460 13161875 13161875 1 FALSE FALSE 12698476 1800538151 kidney hek 2013-11-19T16:40:08.220 2013-12-06T01:23:24.197 2014-03-07T16:11:47.848 151 GSM1269465 SRR1033460.bw HEK293 flow-through c("cell line: HEK293", "purification: oligo(dT) beads", "sample type: non-labeled RNA") SRP028887 SRS504586 SRX380128 SRR1033463 4565046 4565046 1 FALSE FALSE 4467895 633450332 breast mcf 2013-11-19T16:40:11.637 2013-12-06T01:23:43.777 2014-03-07T16:11:47.914 151 GSM1269467 SRR1033463.bw MCF7 4suRNA c("cell line: MCF7", "purification: oligo(dT) beads", "sample type: 4SU-labeled RNA") SRP028887 SRS504586 SRX380128 SRR1033464 3577978 3577978 1 FALSE FALSE 3503370 494133820 breast mcf 2013-11-19T16:40:11.637 2013-12-06T01:23:43.777 2014-03-07T16:11:47.914 151 GSM1269467 SRR1033464.bw MCF7 4suRNA c("cell line: MCF7", "purification: oligo(dT) beads", "sample type: 4SU-labeled RNA") SRP028887 SRS504587 SRX380129 SRR1033465 4522690 4522690 1 FALSE FALSE 4385968 621167602 breast mcf 2013-11-19T16:40:09.660 2013-12-06T01:23:30.420 2014-03-07T16:11:47.881 151 GSM1269468 SRR1033465.bw MCF7 flow-through c("cell line: MCF7", "purification: oligo(dT) beads", "sample type: non-labeled RNA") SRP028887 SRS504587 SRX380129 SRR1033466 5082287 5082287 1 FALSE FALSE 4863455 692646941 breast mcf 2013-11-19T16:40:09.660 2013-12-06T01:23:30.420 2014-03-07T16:11:47.881 151 GSM1269468 SRR1033466.bw MCF7 flow-through c("cell line: MCF7", "purification: oligo(dT) beads", "sample type: non-labeled RNA") SRP028887 SRS504588 SRX380130 SRR1033467 3804723 3804723 1 FALSE FALSE 3673297 522638839 breast mcf 2013-11-19T16:40:13.627 2013-12-06T01:23:56.570 2014-03-07T16:11:47.946 151 GSM1269469 SRR1033467.bw MCF7 total RNA c("cell line: MCF7", "purification: oligo(dT) beads", "sample type: input or total RNA") SRP028887 SRS504588 SRX380130 SRR1033468 5550780 5550780 1 FALSE FALSE 5406683 766998408 breast mcf 2013-11-19T16:40:13.627 2013-12-06T01:23:56.570 2014-03-07T16:11:47.946 151 GSM1269469 SRR1033468.bw MCF7 total RNA c("cell line: MCF7", "purification: oligo(dT) beads", "sample type: input or total RNA") SRP028887 SRS529940 SRX426377 SRR1107833 68730204 68730204 1 TRUE FALSE 67500686 6766048934 breast mcf 2014-01-14T08:00:12.450 2014-01-15T00:44:05.290 2014-01-15T01:22:35.813 202 GSM1306495 SRR1107833.bw MCF7 mRNAseq library c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS529940 SRX426377 SRR1107834 61275556 61275556 1 TRUE FALSE 60275123 6041459871 breast mcf 2014-01-14T08:00:12.450 2014-01-15T00:44:05.290 2014-01-15T01:22:35.813 202 GSM1306495 SRR1107834.bw MCF7 mRNAseq library c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS529940 SRX426377 SRR1107835 53940628 53940628 1 TRUE FALSE 52980376 5312084671 breast mcf 2014-01-14T08:00:12.450 2014-01-15T00:44:05.290 2014-01-15T01:22:35.813 202 GSM1306495 SRR1107835.bw MCF7 mRNAseq library c("cell line: MCF7", "purification: oligo(dT) beads") SRP028887 SRS529941 SRX426378 SRR1107836 15073097 15073097 1 FALSE FALSE 14507646 1442294144 kidney hek 2014-01-14T08:00:09.220 2014-01-15T00:44:05.210 2014-01-15T01:18:21.933 101 GSM1306496 SRR1107836.bw HEK293 mRNAseq library c("cell line: HEK293", "purification: oligo(dT) beads") SRP028887 SRS529941 SRX426378 SRR1107837 18830416 18830416 1 FALSE FALSE 18081623 1798357178 kidney hek 2014-01-14T08:00:09.220 2014-01-15T00:44:05.210 2014-01-15T01:18:21.933 101 GSM1306496 SRR1107837.bw HEK293 mRNAseq library c("cell line: HEK293", "purification: oligo(dT) beads")