project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP028912 SRS471474 SRX336843 SRR954225 37936014 37936014 1 FALSE FALSE 37449748 1864721324 cervix hela 2013-08-19T20:50:27.800 2014-02-05T01:24:12.740 2014-02-05T01:28:16.053 50 GSM1212180 SRR954225.bw HiSeq_IsoG-CPT__D6-26_c10 c("cell type: HeLa cells", "treatment: vehicle") SRP028912 SRS471475 SRX336844 SRR954226 29979701 29979701 1 FALSE FALSE 29575837 1472565168 cervix hela 2013-08-19T20:50:20.160 2014-02-05T01:24:32.730 2014-02-05T01:28:16.367 50 GSM1212181 SRR954226.bw HiSeq_IsoG-CPT__D6-26_CPT c("cell type: HeLa cells", "treatment: camptothecin") SRP028912 SRS471476 SRX336845 SRR954227 34171851 34171851 1 FALSE FALSE 33444277 1665389901 cervix hela 2013-08-19T20:50:14.807 2014-02-05T01:24:25.443 2014-02-05T01:28:16.620 50 GSM1212182 SRR954227.bw HiSeq_IsoG-CPT__D7-10_c10 c("cell type: HeLa cells", "treatment: vehicle") SRP028912 SRS471477 SRX336846 SRR954228 31407269 31407269 1 FALSE FALSE 31000367 1543792967 cervix hela 2013-08-19T20:50:26.690 2014-02-05T01:24:34.943 2014-02-05T01:28:16.893 50 GSM1212183 SRR954228.bw HiSeq_IsoG-CPT__D7-10_CPT c("cell type: HeLa cells", "treatment: camptothecin") SRP028912 SRS471478 SRX336847 SRR954229 35079909 35079909 1 FALSE FALSE 34700824 1728160139 cervix hela 2013-08-19T20:50:34.410 2014-02-05T01:24:38.607 2014-02-05T01:28:17.263 50 GSM1212184 SRR954229.bw HiSeq_IsoG-CPT__D6-26_c60 c("cell type: HeLa cells", "treatment: vehicle") SRP028912 SRS471479 SRX336848 SRR954230 46162437 46162437 1 FALSE FALSE 44135276 2187985765 cervix hela 2013-08-19T20:50:16.250 2014-02-05T01:24:23.193 2014-02-05T01:28:17.587 50 GSM1212185 SRR954230.bw HiSeq_IsoG-CPT__D6-26_IsG c("cell type: HeLa cells", "treatment: Isoginkgetin") SRP028912 SRS471480 SRX336849 SRR954231 35578491 35578491 1 FALSE FALSE 34925920 1739670791 cervix hela 2013-08-19T20:50:38.637 2014-02-05T01:24:36.847 2014-02-05T01:28:17.983 50 GSM1212186 SRR954231.bw HiSeq_IsoG-CPT__D8-01_c60 c("cell type: HeLa cells", "treatment: vehicle") SRP028912 SRS471481 SRX336850 SRR954232 39207617 39207617 1 FALSE FALSE 36872247 1826021100 cervix hela 2013-08-19T20:50:19.070 2014-02-05T01:24:42.260 2014-02-05T01:28:18.307 50 GSM1212187 SRR954232.bw HiSeq_IsoG-CPT__D8-01_IsG c("cell type: HeLa cells", "treatment: Isoginkgetin") SRP028912 SRS471482 SRX336851 SRR954233 32794395 32794395 1 FALSE FALSE 32225060 1604805574 cervix hela 2013-08-19T20:50:17.387 2014-02-05T01:24:53.007 2014-02-05T01:28:18.633 50 GSM1212188 SRR954233.bw HiSeq_IsoG-CPT__D9-19_c60 c("cell type: HeLa cells", "treatment: vehicle") SRP028912 SRS471483 SRX336852 SRR954234 41112193 41112193 1 FALSE FALSE 40160944 1990936364 cervix hela 2013-08-19T20:50:25.650 2014-02-05T01:26:26.110 2014-02-05T01:28:18.880 50 GSM1212189 SRR954234.bw HiSeq_IsoG-CPT__D9-19_IsG c("cell type: HeLa cells", "treatment: Isoginkgetin") SRP028912 SRS471484 SRX336853 SRR954235 91589423 91589423 1 FALSE FALSE 91046967 4542517435 bone bj 2013-08-19T20:50:22.357 2014-02-05T01:26:37.120 2014-02-05T01:28:19.150 50 GSM1212190 SRR954235.bw LCL__BM1_riboMinus c("cell type: Lymphocyte cell lines", "treatment: control") SRP028912 SRS471485 SRX336854 SRR954236 93471072 93471072 1 FALSE FALSE 93044097 4641787800 bone bj 2013-08-19T20:50:21.250 2014-02-05T01:26:41.263 2014-02-05T01:28:19.450 50 GSM1212191 SRR954236.bw LCL__BM2_riboMinus c("cell type: Lymphocyte cell lines", "treatment: control") SRP028912 SRS471486 SRX336855 SRR954237 104601830 104601830 1 FALSE FALSE 104112256 5194536926 bone bj 2013-08-19T20:50:28.890 2014-02-05T01:27:01.750 2014-02-05T01:28:19.757 50 GSM1212192 SRR954237.bw LCL__BM3_riboMinus c("cell type: Lymphocyte cell lines", "treatment: control") SRP028912 SRS471487 SRX336856 SRR954238 35370622 35370622 1 TRUE FALSE 35119925 1398241102 bone bj 2013-08-19T20:50:24.567 2014-02-05T01:26:30.133 2014-02-05T01:28:20.383 80 GSM1212193 SRR954238.bw LCL__BM1_4SU__1 c("cell type: Lymphocyte cell lines", "treatment: 4-thiouridine 5' lableing") SRP028912 SRS471488 SRX336857 SRR954239 35370622 35370622 1 TRUE FALSE 35119883 1398237160 bone bj 2013-08-19T20:50:23.450 2014-02-05T01:26:33.723 2014-02-05T01:28:20.640 80 GSM1212194 SRR954239.bw LCL__BM1_4SU__2 c("cell type: Lymphocyte cell lines", "treatment: 4-thiouridine 5' lableing") SRP028912 SRS471489 SRX336858 SRR954240 196849214 196849214 1 TRUE FALSE 193420531 9230416678 bone bj 2013-08-19T20:50:32.260 2014-02-05T01:26:38.997 2014-02-05T01:28:20.937 100 GSM1212195 SRR954240.bw LCL__BM2_4SU__1 c("cell type: Lymphocyte cell lines", "treatment: 4-thiouridine 5' lableing") SRP028912 SRS471490 SRX336859 SRR954241 196849214 196849214 1 TRUE FALSE 193420830 9230432170 bone bj 2013-08-19T20:50:31.017 2014-02-05T01:26:44.860 2014-02-05T01:28:21.207 100 GSM1212196 SRR954241.bw LCL__BM2_4SU__2 c("cell type: Lymphocyte cell lines", "treatment: 4-thiouridine 5' lableing") SRP028912 SRS471491 SRX336860 SRR954242 80985832 80985832 1 FALSE FALSE 80376479 4006715326 bone bj 2013-08-19T20:50:29.893 2014-02-05T01:27:13.013 2014-02-05T01:31:13.307 50 GSM1212197 SRR954242.bw LCL__BM3_4SU c("cell type: Lymphocyte cell lines", "treatment: 4-thiouridine 5' lableing")