project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP030401 SRS487158 SRX359579 SRR1002075 56241840 56241840 1 TRUE FALSE 53582319 2547350810 breast esc 2013-09-24T09:10:10.223 2013-12-07T01:13:50.103 2014-03-07T15:52:44.220 100 GSM1239118 SRR1002075.bw FFPE_ScriptSeq_BRB123 c("tissue id: BRB123", "er/pr/her2 status: + / + / -", "tumor size: 1.7cm", "tumor grade: 2", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487159 SRX359580 SRR1002076 56244704 56244704 1 TRUE FALSE 55203785 2676708329 breast esc 2013-09-24T09:10:13.940 2013-12-07T01:13:44.930 2014-03-07T15:52:44.277 100 GSM1239119 SRR1002076.bw FFPE_ScriptSeq_BRB144 c("tissue id: BRB144", "er/pr/her2 status: - / - / +", "tumor size: 6cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487160 SRX359581 SRR1002077 56242720 56242720 1 TRUE FALSE 55561399 2699108145 breast esc 2013-09-24T09:10:11.943 2013-12-07T01:13:51.663 2014-03-07T15:52:44.251 100 GSM1239120 SRR1002077.bw FFPE_ScriptSeq_BRB147 c("tissue id: BRB147", "er/pr/her2 status: + / - / +", "tumor size: 3cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487161 SRX359582 SRR1002078 56257218 56257218 1 TRUE FALSE 54882935 2629561566 breast esc 2013-09-24T09:10:18.197 2013-12-07T01:13:54.480 2014-03-07T15:52:44.373 100 GSM1239121 SRR1002078.bw FFPE_ScriptSeq_BRB157 c("tissue id: BRB157", "er/pr/her2 status: + / + / +", "tumor size: 1.3cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487162 SRX359583 SRR1002079 56231430 56231430 1 TRUE FALSE 55703996 2712036277 breast esc 2013-09-24T09:10:16.723 2013-12-07T01:13:46.267 2014-03-07T15:52:44.340 100 GSM1239122 SRR1002079.bw FFPE_ScriptSeq_BRB212 c("tissue id: BRB212", "er/pr/her2 status: - / - / +", "tumor size: 2cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487163 SRX359584 SRR1002080 56240852 56240852 1 TRUE FALSE 55588323 2702562755 breast esc 2013-09-24T09:10:15.140 2013-12-07T01:13:53.417 2014-03-07T15:52:44.303 100 GSM1239123 SRR1002080.bw FFPE_ScriptSeq_BRB215 c("tissue id: BRB215", "er/pr/her2 status: + / + / -", "tumor size: 3.5cm", "tumor grade: 2", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487164 SRX359585 SRR1002081 56245058 56245058 1 TRUE FALSE 55828537 2729721518 breast esc 2013-09-24T09:10:28.360 2013-12-07T01:16:30.113 2014-03-07T15:52:44.583 100 GSM1239124 SRR1002081.bw FFPE_ScriptSeq_BRB248 c("tissue id: BRB248", "er/pr/her2 status: + / + / +", "tumor size: 2cm", "tumor grade: 2", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487165 SRX359586 SRR1002082 56246360 56246360 1 TRUE FALSE 55742656 2717138839 breast esc 2013-09-24T09:10:32.710 2013-12-07T01:13:48.660 2014-03-07T15:52:44.683 100 GSM1239125 SRR1002082.bw FFPE_ScriptSeq_BRB277 c("tissue id: BRB277", "er/pr/her2 status: + / + / +", "tumor size: 3cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487166 SRX359587 SRR1002083 56240130 56240130 1 TRUE FALSE 54384644 2619230037 breast esc 2013-09-24T09:10:20.013 2013-12-07T01:21:16.417 2014-03-07T15:52:44.406 100 GSM1239126 SRR1002083.bw FFPE_ScriptSeq_MCJBCR028 c("tissue id: MCJBCR028", "er/pr/her2 status: + / + / +", "tumor size: 1cm", "tumor grade: 2", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487167 SRX359588 SRR1002084 56245630 56245630 1 TRUE FALSE 55829452 2749715110 breast esc 2013-09-24T09:10:26.277 2013-12-07T01:21:22.967 2014-03-07T15:52:44.545 100 GSM1239127 SRR1002084.bw FROZ_ScriptSeq_BRB123 c("tissue id: BRB123", "er/pr/her2 status: + / + / -", "tumor size: 1.7cm", "tumor grade: 2", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487168 SRX359589 SRR1002085 56240688 56240688 1 TRUE FALSE 55831889 2748823349 breast esc 2013-09-24T09:10:30.717 2013-12-07T01:21:27.077 2014-03-07T15:52:44.651 100 GSM1239128 SRR1002085.bw FROZ_ScriptSeq_BRB144 c("tissue id: BRB144", "er/pr/her2 status: - / - / +", "tumor size: 6cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487169 SRX359591 SRR1002087 56237560 56237560 1 TRUE FALSE 55855040 2751820758 breast esc 2013-09-24T09:10:25.213 2013-12-07T01:21:40.897 2014-03-07T15:52:44.510 100 GSM1239130 SRR1002087.bw FROZ_ScriptSeq_BRB157 c("tissue id: BRB157", "er/pr/her2 status: + / + / +", "tumor size: 1.3cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487170 SRX359590 SRR1002086 56245672 56245672 1 TRUE FALSE 55841730 2746230681 breast esc 2013-09-24T09:10:23.127 2013-12-07T01:21:34.110 2014-03-07T15:52:44.479 100 GSM1239129 SRR1002086.bw FROZ_ScriptSeq_BRB147 c("tissue id: BRB147", "er/pr/her2 status: + / - / +", "tumor size: 3cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487171 SRX359592 SRR1002088 56251278 56251278 1 TRUE FALSE 55898346 2752506221 breast esc 2013-09-24T09:10:37.233 2013-12-07T01:21:45.523 2014-03-07T15:52:44.838 100 GSM1239131 SRR1002088.bw FROZ_ScriptSeq_BRB212 c("tissue id: BRB212", "er/pr/her2 status: - / - / +", "tumor size: 2cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487172 SRX359593 SRR1002089 56241692 56241692 1 TRUE FALSE 55696505 2735575695 breast esc 2013-09-24T09:10:21.177 2013-12-07T01:21:19.620 2014-03-07T15:52:44.438 100 GSM1239132 SRR1002089.bw FROZ_ScriptSeq_BRB215 c("tissue id: BRB215", "er/pr/her2 status: + / + / -", "tumor size: 3.5cm", "tumor grade: 2", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487174 SRX359595 SRR1002091 56244656 56244656 1 TRUE FALSE 55560704 2730423916 breast esc 2013-09-24T09:10:39.940 2013-12-07T01:21:21.020 2014-03-07T15:52:44.906 100 GSM1239134 SRR1002091.bw FROZ_ScriptSeq_BRB277 c("tissue id: BRB277", "er/pr/her2 status: + / + / +", "tumor size: 3cm", "tumor grade: 3", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487175 SRX359596 SRR1002092 56241662 56241662 1 TRUE FALSE 55590502 2732074399 breast esc 2013-09-24T09:10:41.240 2013-12-07T01:21:31.240 2014-03-07T15:52:44.939 100 GSM1239135 SRR1002092.bw FROZ_ScriptSeq_MCJBCR028 c("tissue id: MCJBCR028", "er/pr/her2 status: + / + / +", "tumor size: 1cm", "tumor grade: 2", "molecule subtype: rRNA depleted RNA") SRP030401 SRS487176 SRX359597 SRR1002093 56238390 56238390 1 TRUE FALSE 55702725 2768050036 breast esc 2013-09-24T09:10:34.100 2013-12-07T01:21:32.780 2014-03-07T15:52:44.720 100 GSM1239136 SRR1002093.bw FROZ_TruSeq_BRB123 c("tissue id: BRB123", "er/pr/her2 status: + / + / -", "tumor size: 1.7cm", "tumor grade: 2", "molecule subtype: polyA enriched RNA") SRP030401 SRS487177 SRX359598 SRR1002094 56240748 56240748 1 TRUE FALSE 55688676 2768461050 breast esc 2013-09-24T09:10:38.913 2013-12-07T01:10:32.170 2014-03-07T15:52:44.867 100 GSM1239137 SRR1002094.bw FROZ_TruSeq_BRB144 c("tissue id: BRB144", "er/pr/her2 status: - / - / +", "tumor size: 6cm", "tumor grade: 3", "molecule subtype: polyA enriched RNA") SRP030401 SRS487178 SRX359599 SRR1002095 56249272 56249272 1 TRUE FALSE 55813626 2775453030 breast esc 2013-09-24T09:10:35.283 2013-12-07T01:10:39.150 2014-03-07T15:52:44.754 100 GSM1239138 SRR1002095.bw FROZ_TruSeq_BRB147 c("tissue id: BRB147", "er/pr/her2 status: + / - / +", "tumor size: 3cm", "tumor grade: 3", "molecule subtype: polyA enriched RNA") SRP030401 SRS487179 SRX359600 SRR1002096 56250210 56250210 1 TRUE FALSE 55837565 2774533114 breast esc 2013-09-24T09:10:36.293 2013-12-07T01:10:28.380 2014-03-07T15:52:44.803 100 GSM1239139 SRR1002096.bw FROZ_TruSeq_BRB157 c("tissue id: BRB157", "er/pr/her2 status: + / + / +", "tumor size: 1.3cm", "tumor grade: 3", "molecule subtype: polyA enriched RNA") SRP030401 SRS487180 SRX359601 SRR1002097 56231760 56231760 1 TRUE FALSE 55720293 2768802231 breast esc 2013-09-24T09:10:47.273 2013-12-07T01:10:33.830 2014-03-07T15:52:45.119 100 GSM1239140 SRR1002097.bw FROZ_TruSeq_BRB212 c("tissue id: BRB212", "er/pr/her2 status: - / - / +", "tumor size: 2cm", "tumor grade: 3", "molecule subtype: polyA enriched RNA") SRP030401 SRS487181 SRX359602 SRR1002098 56233066 56233066 1 TRUE FALSE 55647511 2766478663 breast esc 2013-09-24T09:10:44.203 2013-12-07T01:10:36.137 2014-03-07T15:52:45.008 100 GSM1239141 SRR1002098.bw FROZ_TruSeq_BRB215 c("tissue id: BRB215", "er/pr/her2 status: + / + / -", "tumor size: 3.5cm", "tumor grade: 2", "molecule subtype: polyA enriched RNA") SRP030401 SRS487182 SRX359603 SRR1002099 56250036 56250036 1 TRUE FALSE 55757944 2773290011 breast esc 2013-09-24T09:10:43.127 2013-12-07T01:10:25.833 2014-03-07T15:52:44.972 100 GSM1239142 SRR1002099.bw FROZ_TruSeq_BRB248 c("tissue id: BRB248", "er/pr/her2 status: + / + / +", "tumor size: 2cm", "tumor grade: 2", "molecule subtype: polyA enriched RNA") SRP030401 SRS487183 SRX359604 SRR1002100 56246704 56246704 1 TRUE FALSE 55586976 2763826965 breast esc 2013-09-24T09:10:45.157 2013-12-07T01:10:30.553 2014-03-07T15:52:45.043 100 GSM1239143 SRR1002100.bw FROZ_TruSeq_BRB277 c("tissue id: BRB277", "er/pr/her2 status: + / + / +", "tumor size: 3cm", "tumor grade: 3", "molecule subtype: polyA enriched RNA") SRP030401 SRS487185 SRX359605 SRR1002101 56239738 56239738 1 TRUE FALSE 55498888 2753950717 breast esc 2013-09-24T09:10:46.133 2013-12-07T01:10:40.547 2014-03-07T15:52:45.081 100 GSM1239144 SRR1002101.bw FROZ_TruSeq_MCJBCR028 c("tissue id: MCJBCR028", "er/pr/her2 status: + / + / +", "tumor size: 1cm", "tumor grade: 2", "molecule subtype: polyA enriched RNA") SRP030401 SRS487173 SRX359594 SRR1002090 56244898 0 0 TRUE FALSE 0 NA breast esc 2013-09-24T09:10:29.730 2013-12-07T01:21:24.987 2014-03-07T15:52:44.620 100 GSM1239133 NA FROZ_ScriptSeq_BRB248 c("tissue id: BRB248", "er/pr/her2 status: + / + / +", "tumor size: 2cm", "tumor grade: 2", "molecule subtype: rRNA depleted RNA")