project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP033466 SRS510387 SRX386373 SRR1042053 4625228 4625228 1 FALSE FALSE 4530926 224228522 NA NA 2013-12-03T16:20:07.170 2014-11-28T00:44:06.590 2014-11-28T01:19:15.230 50 GSM1278330 SRR1042053.bw MALT1-0 rep1 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: unstimulated") SRP033466 SRS510387 SRX386373 SRR1042054 6153856 6153856 1 FALSE FALSE 6104933 303922240 NA NA 2013-12-03T16:20:07.170 2014-11-28T00:44:06.590 2014-11-28T01:19:15.230 50 GSM1278330 SRR1042054.bw MALT1-0 rep1 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: unstimulated") SRP033466 SRS510388 SRX386374 SRR1042055 4449945 4449945 1 FALSE FALSE 4354873 215538956 NA NA 2013-12-03T16:20:08.293 2014-11-28T00:44:06.773 2014-11-28T01:15:15.710 50 GSM1278331 SRR1042055.bw MALT1-3 rep1 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: unstimulated") SRP033466 SRS510388 SRX386374 SRR1042056 3635038 3635038 1 FALSE FALSE 3604069 179476579 NA NA 2013-12-03T16:20:08.293 2014-11-28T00:44:06.773 2014-11-28T01:15:15.710 50 GSM1278331 SRR1042056.bw MALT1-3 rep1 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: unstimulated") SRP033466 SRS510389 SRX386376 SRR1042059 4486824 4486824 1 FALSE FALSE 4404626 217929180 NA NA 2013-12-03T16:20:12.497 2014-11-28T00:44:06.857 2014-11-28T01:19:15.510 50 GSM1278333 SRR1042059.bw RACA-0 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: unstimulated") SRP033466 SRS510389 SRX386376 SRR1042060 4083528 4083528 1 FALSE FALSE 4051712 201552612 NA NA 2013-12-03T16:20:12.497 2014-11-28T00:44:06.857 2014-11-28T01:19:15.510 50 GSM1278333 SRR1042060.bw RACA-0 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: unstimulated") SRP033466 SRS510390 SRX386375 SRR1042057 4345876 4345876 1 FALSE FALSE 4215210 208487045 NA NA 2013-12-03T16:20:24.413 2014-11-28T00:44:07.063 2014-11-28T01:15:16.113 50 GSM1278332 SRR1042057.bw MALT1-18 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: unstimulated") SRP033466 SRS510390 SRX386375 SRR1042058 3764025 3764025 1 FALSE FALSE 3714344 184803147 NA NA 2013-12-03T16:20:24.413 2014-11-28T00:44:07.063 2014-11-28T01:15:16.113 50 GSM1278332 SRR1042058.bw MALT1-18 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: unstimulated") SRP033466 SRS510391 SRX386377 SRR1042061 4326107 4326107 1 FALSE FALSE 4247005 210308363 NA NA 2013-12-03T16:20:11.417 2014-11-28T00:44:06.833 2014-11-28T01:15:16.477 50 GSM1278334 SRR1042061.bw RACA-3 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-C464A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: unstimulated") SRP033466 SRS510391 SRX386377 SRR1042062 4069045 4069045 1 FALSE FALSE 4037463 201004378 NA NA 2013-12-03T16:20:11.417 2014-11-28T00:44:06.833 2014-11-28T01:15:16.477 50 GSM1278334 SRR1042062.bw RACA-3 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-C464A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: unstimulated") SRP033466 SRS510392 SRX386378 SRR1042063 4170268 4170268 1 FALSE FALSE 4082018 202089145 NA NA 2013-12-03T16:20:14.640 2014-11-28T00:44:06.890 2014-11-28T01:15:16.770 50 GSM1278335 SRR1042063.bw RACA-18 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-C464A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: unstimulated") SRP033466 SRS510392 SRX386378 SRR1042064 3695790 3695790 1 FALSE FALSE 3658809 182189641 NA NA 2013-12-03T16:20:14.640 2014-11-28T00:44:06.890 2014-11-28T01:15:16.770 50 GSM1278335 SRR1042064.bw RACA-18 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-C464A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: unstimulated") SRP033466 SRS510393 SRX386380 SRR1042067 4976453 4976453 1 FALSE FALSE 4873176 241303118 NA NA 2013-12-03T16:20:17.113 2014-11-28T00:44:06.923 2014-11-28T01:15:17.163 50 GSM1278337 SRR1042067.bw MALT1-3 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A-C464A", "p/i stimulation: unstimulated") SRP033466 SRS510393 SRX386380 SRR1042068 4244940 4244940 1 FALSE FALSE 4210539 209791870 NA NA 2013-12-03T16:20:17.113 2014-11-28T00:44:06.923 2014-11-28T01:15:17.163 50 GSM1278337 SRR1042068.bw MALT1-3 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A-C464A", "p/i stimulation: unstimulated") SRP033466 SRS510394 SRX386379 SRR1042065 4843163 4843163 1 FALSE FALSE 4745289 234908748 NA NA 2013-12-03T16:20:10.370 2014-11-28T00:44:06.783 2014-11-28T01:20:15.120 50 GSM1278336 SRR1042065.bw MALT1-0 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A-C464A", "p/i stimulation: unstimulated") SRP033466 SRS510394 SRX386379 SRR1042066 4425417 4425417 1 FALSE FALSE 4385984 218406528 NA NA 2013-12-03T16:20:10.370 2014-11-28T00:44:06.783 2014-11-28T01:20:15.120 50 GSM1278336 SRR1042066.bw MALT1-0 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A-C464A", "p/i stimulation: unstimulated") SRP033466 SRS510395 SRX386381 SRR1042069 4066428 4066428 1 FALSE FALSE 3949941 195413052 NA NA 2013-12-03T16:20:13.560 2014-11-28T00:44:06.870 2014-11-28T01:15:17.460 50 GSM1278338 SRR1042069.bw MALT1-18 rep2 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: 3 hours P/I") SRP033466 SRS510395 SRX386381 SRR1042070 3642123 3642123 1 FALSE FALSE 3588617 178651012 NA NA 2013-12-03T16:20:13.560 2014-11-28T00:44:06.870 2014-11-28T01:15:17.460 50 GSM1278338 SRR1042070.bw MALT1-18 rep2 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: 3 hours P/I") SRP033466 SRS510396 SRX386382 SRR1042071 5397969 5397969 1 FALSE FALSE 5264185 260390622 NA NA 2013-12-03T16:20:15.667 2014-11-28T00:44:06.907 2014-11-28T01:20:15.373 50 GSM1278339 SRR1042071.bw RACA-0 rep2 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: 3 hours P/I") SRP033466 SRS510396 SRX386382 SRR1042072 4587495 4587495 1 FALSE FALSE 4521373 225020531 NA NA 2013-12-03T16:20:15.667 2014-11-28T00:44:06.907 2014-11-28T01:20:15.373 50 GSM1278339 SRR1042072.bw RACA-0 rep2 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: 3 hours P/I") SRP033466 SRS510397 SRX386383 SRR1042073 4498943 4498943 1 FALSE FALSE 4418143 218664028 NA NA 2013-12-03T16:20:25.417 2014-11-28T00:44:07.143 2014-11-28T01:15:17.793 50 GSM1278340 SRR1042073.bw RACA-3 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 3 hours P/I") SRP033466 SRS510397 SRX386383 SRR1042074 4114644 4114644 1 FALSE FALSE 4079855 202959981 NA NA 2013-12-03T16:20:25.417 2014-11-28T00:44:07.143 2014-11-28T01:15:17.793 50 GSM1278340 SRR1042074.bw RACA-3 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 3 hours P/I") SRP033466 SRS510398 SRX386384 SRR1042075 5348030 5348030 1 FALSE FALSE 5234986 259260020 NA NA 2013-12-03T16:20:18.720 2014-11-28T00:44:06.933 2014-11-28T01:15:18.083 50 GSM1278341 SRR1042075.bw RACA-18 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 3 hours P/I") SRP033466 SRS510398 SRX386384 SRR1042076 4796568 4796568 1 FALSE FALSE 4749578 236415035 NA NA 2013-12-03T16:20:18.720 2014-11-28T00:44:06.933 2014-11-28T01:15:18.083 50 GSM1278341 SRR1042076.bw RACA-18 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 3 hours P/I") SRP033466 SRS510399 SRX386385 SRR1042077 15083889 15083889 1 FALSE FALSE 14984826 744993843 NA NA 2013-12-03T16:20:19.853 2014-11-28T00:44:06.967 2014-11-28T01:20:15.600 50 GSM1278342 SRR1042077.bw JDM-CA-0 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-C464A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 3 hours P/I") SRP033466 SRS510400 SRX386386 SRR1042078 13005931 13005931 1 FALSE FALSE 12902479 641545971 NA NA 2013-12-03T16:20:22.330 2014-11-28T00:44:07.000 2014-11-28T01:16:15.590 50 GSM1278343 SRR1042078.bw JDM-CA-3 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-C464A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 3 hours P/I") SRP033466 SRS510401 SRX386388 SRR1042080 16338571 16338571 1 FALSE FALSE 16227922 806471419 NA NA 2013-12-03T16:20:23.417 2014-11-28T00:44:07.013 2014-11-28T01:16:16.387 50 GSM1278345 SRR1042080.bw JDM-CA-0 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A-C464A", "p/i stimulation: 3 hours P/I") SRP033466 SRS510402 SRX386387 SRR1042079 15389333 15389333 1 FALSE FALSE 15273286 759454882 NA NA 2013-12-03T16:20:21.067 2014-11-28T00:44:06.990 2014-11-28T01:16:16.847 50 GSM1278344 SRR1042079.bw JDM-CA-18 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A-C464A", "p/i stimulation: 3 hours P/I") SRP033466 SRS510403 SRX386389 SRR1042081 14838206 14838206 1 FALSE FALSE 14716967 731801596 NA NA 2013-12-03T16:20:27.510 2014-11-28T00:44:07.253 2014-11-28T01:20:15.843 50 GSM1278346 SRR1042081.bw JDM-CA-3 rep2 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: 18 hours P/I") SRP033466 SRS510404 SRX386390 SRR1042082 18194360 18194360 1 FALSE FALSE 18074725 898764942 NA NA 2013-12-03T16:20:26.480 2014-11-28T00:44:07.197 2014-11-28T01:16:17.273 50 GSM1278347 SRR1042082.bw JDM-CA-18 rep2 c("cell line: Jurkat T cell", "ectopic expression: wild type MALT1", "p/i stimulation: 18 hours P/I") SRP033466 SRS510405 SRX386391 SRR1042083 17518883 17518883 1 FALSE FALSE 17416913 865997019 NA NA 2013-12-03T16:20:28.617 2014-11-28T00:44:07.393 2014-11-28T01:16:17.767 50 GSM1278348 SRR1042083.bw JDM-RA-0 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 18 hours P/I") SRP033466 SRS510406 SRX386392 SRR1042084 17847085 17847085 1 FALSE FALSE 17723973 881254376 NA NA 2013-12-03T16:20:29.887 2014-11-28T00:44:07.920 2014-11-28T01:20:16.237 50 GSM1278349 SRR1042084.bw JDM-RA-3 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 18 hours P/I") SRP033466 SRS510407 SRX386393 SRR1042085 13781199 13781199 1 FALSE FALSE 13677160 680167654 NA NA 2013-12-03T16:20:30.980 2014-11-28T00:44:07.953 2014-11-28T01:16:18.267 50 GSM1278350 SRR1042085.bw JDM-RA-18 rep1 c("cell line: Jurkat T cell", "ectopic expression: MALT1-C464A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 18 hours P/I") SRP033466 SRS510408 SRX386394 SRR1042086 14207813 14207813 1 FALSE FALSE 14110941 701749433 NA NA 2013-12-03T16:20:33.220 2014-11-28T00:44:08.023 2014-11-28T01:16:18.647 50 GSM1278351 SRR1042086.bw JDM-RA-0 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-C464A", "genotype: endogenous MALT1 knock-out", "p/i stimulation: 18 hours P/I") SRP033466 SRS510409 SRX386395 SRR1042087 15033708 15033708 1 FALSE FALSE 14930055 742544545 NA NA 2013-12-03T16:20:34.447 2014-11-28T00:44:08.073 2014-11-28T01:16:19.120 50 GSM1278352 SRR1042087.bw JDM-RA-3 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A-C464A", "p/i stimulation: 18 hours P/I") SRP033466 SRS510410 SRX386396 SRR1042088 19153138 19153138 1 FALSE FALSE 19038824 946917535 NA NA 2013-12-03T16:20:32.063 2014-11-28T00:44:07.990 2014-11-28T01:16:19.537 50 GSM1278353 SRR1042088.bw JDM-RA-18 rep2 c("cell line: Jurkat T cell", "ectopic expression: MALT1-R149A-C464A", "p/i stimulation: 18 hours P/I")