project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP034601 SRS516771 SRX395838 SRR1054668 27030476 27030476 1 FALSE FALSE 25870777 1278568868 NA NA 2013-12-18T15:20:19.130 2014-10-23T17:29:41.543 2014-10-24T01:18:19.197 51 GSM1294145 SRR1054668.bw Luciferase knockdown in PC3 cells using shRNa replicate 1 c("cell line: PC3", "source tissue: bone metastasis of grade IV prostate cancer", "cell type: prostate cancer cells", "genotype/variation: WT (Luciferase knockdown control)") SRP034601 SRS516772 SRX395839 SRR1054669 27428326 27428326 1 FALSE FALSE 27101261 1348939082 NA NA 2013-12-18T15:20:21.230 2014-10-23T17:29:41.577 2014-10-24T01:18:19.540 51 GSM1294146 SRR1054669.bw Luciferase knockdown in PC3 cells using shRNa replicate 2 c("cell line: PC3", "source tissue: bone metastasis of grade IV prostate cancer", "cell type: prostate cancer cells", "genotype/variation: WT (Luciferase knockdown control)") SRP034601 SRS516773 SRX395840 SRR1054670 32077714 32077714 1 FALSE FALSE 30436386 1513930955 NA NA 2013-12-18T15:20:14.737 2014-10-23T17:29:41.473 2014-10-24T01:18:19.913 51 GSM1294147 SRR1054670.bw Luciferase knockdown in PC3 cells using shRNa replicate 3 c("cell line: PC3", "source tissue: bone metastasis of grade IV prostate cancer", "cell type: prostate cancer cells", "genotype/variation: WT (Luciferase knockdown control)") SRP034601 SRS516774 SRX395841 SRR1054671 24542895 24542895 1 FALSE FALSE 24026202 1196387069 NA NA 2013-12-18T15:20:10.453 2014-10-23T17:29:41.390 2014-10-24T01:14:19.193 51 GSM1294148 SRR1054671.bw c-Jun knockdown in PC3 cells using shRNa replicate 1 c("cell line: PC3", "source tissue: bone metastasis of grade IV prostate cancer", "cell type: prostate cancer cells", "genotype/variation: c-Jun knockdown") SRP034601 SRS516775 SRX395842 SRR1054672 23775182 23775182 1 FALSE FALSE 23478054 1165719447 NA NA 2013-12-18T15:20:12.710 2014-10-23T17:29:41.430 2014-10-24T01:18:20.160 51 GSM1294149 SRR1054672.bw c-Jun knockdown in PC3 cells using shRNa replicate 2 c("cell line: PC3", "source tissue: bone metastasis of grade IV prostate cancer", "cell type: prostate cancer cells", "genotype/variation: c-Jun knockdown") SRP034601 SRS516776 SRX395843 SRR1054673 27552314 27552314 1 FALSE FALSE 27197178 1358145189 NA NA 2013-12-18T15:20:23.500 2014-10-23T17:29:41.617 2014-10-24T01:14:19.483 51 GSM1294150 SRR1054673.bw c-Jun knockdown in PC3 cells using shRNa replicate 3 c("cell line: PC3", "source tissue: bone metastasis of grade IV prostate cancer", "cell type: prostate cancer cells", "genotype/variation: c-Jun knockdown") SRP034601 SRS516777 SRX395844 SRR1054674 27793070 27793070 1 FALSE FALSE 26601669 1303639656 NA NA 2013-12-18T15:20:08.320 2014-10-23T17:29:41.353 2014-10-24T01:18:20.510 51 GSM1294151 SRR1054674.bw Jun-D knockdown in PC3 cells using shRNa replicate 1 c("cell line: PC3", "source tissue: bone metastasis of grade IV prostate cancer", "cell type: prostate cancer cells", "genotype/variation: Jun-D knockdown") SRP034601 SRS516778 SRX395845 SRR1054675 30397918 30397918 1 FALSE FALSE 30077905 1489452183 NA NA 2013-12-18T15:20:06.147 2014-10-23T17:29:41.237 2014-10-24T01:18:20.813 51 GSM1294152 SRR1054675.bw Jun-D knockdown in PC3 cells using shRNa replicate 2 c("cell line: PC3", "source tissue: bone metastasis of grade IV prostate cancer", "cell type: prostate cancer cells", "genotype/variation: Jun-D knockdown") SRP034601 SRS516779 SRX395846 SRR1054676 26662018 26662018 1 FALSE FALSE 24923343 1216041981 NA NA 2013-12-18T15:20:16.843 2014-10-23T17:29:41.510 2014-10-24T01:18:21.080 51 GSM1294153 SRR1054676.bw Jun-D knockdown in PC3 cells using shRNa replicate 3 c("cell line: PC3", "source tissue: bone metastasis of grade IV prostate cancer", "cell type: prostate cancer cells", "genotype/variation: Jun-D knockdown")