project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP034732 SRS519890 SRX399456 SRR1060753 24167608 24167608 1 TRUE FALSE 14356738 994719968 blood esc 2013-12-26T11:50:28.450 2014-02-28T01:26:37.400 2014-02-28T02:15:13.160 150 GSM1298099 SRR1060753.bw Subject 1 Lane 1 GD c("tissue: blood", "index: ATCACG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A01", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: FALSE", "Sex: male", "internal_id: 1", "wbc (10e9/l): 4.27", "neu (10e9/l): 2.99", "lym (10e9/l): 0.863", "mono (10e9/l): 0.355", "eos (10e9/l): 0.041", "baso (10e9/l): 0.019", "rbc (10e12/l): 4.51", "plt (10e9/l): 164", "rna volume (ul): 35", "rna amount (ng): 1903.3", "rna concentration (ng/ul): 54.38", "nanodrop 260/280: 1.93", "nanodrop 260/230: 0.7", "rin: 8.9", "total reads: 24167608", "mapped reads: 2914523") SRP034732 SRS519891 SRX399457 SRR1060754 72934218 72934218 1 TRUE FALSE 65257526 4764253577 blood esc 2013-12-26T11:50:18.310 2014-02-28T01:25:35.760 2014-02-28T02:11:14.163 150 GSM1298100 SRR1060754.bw Subject 2 Lane 1 GD c("tissue: blood", "index: GATCAG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A02", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: FALSE", "Sex: male", "internal_id: 2", "wbc (10e9/l): 5.27", "neu (10e9/l): 2.98", "lym (10e9/l): 1.16", "mono (10e9/l): 0.751", "eos (10e9/l): 0.311", "baso (10e9/l): 0.066", "rbc (10e12/l): 4.66", "plt (10e9/l): 256", "rna volume (ul): 38.5", "rna amount (ng): 4062.135", "rna concentration (ng/ul): 105.51", "nanodrop 260/280: 2.05", "nanodrop 260/230: 0.45", "rin: 8.7", "total reads: 72934218", "mapped reads: 13452261") SRP034732 SRS519892 SRX399458 SRR1060755 57394324 57394324 1 TRUE FALSE 49054624 3557117462 blood esc 2013-12-26T11:50:10.557 2014-02-28T01:25:57.793 2014-02-28T02:11:17.957 150 GSM1298101 SRR1060755.bw Subject 3 Lane 1 GD c("tissue: blood", "index: AACCCC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A03", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: FALSE", "Sex: male", "internal_id: 3", "wbc (10e9/l): 5.52", "neu (10e9/l): 2.54", "lym (10e9/l): 2.31", "mono (10e9/l): 0.542", "eos (10e9/l): 0.086", "baso (10e9/l): 0.046", "rbc (10e12/l): 4.9", "plt (10e9/l): 259", "rna volume (ul): 37.5", "rna amount (ng): 5010", "rna concentration (ng/ul): 133.6", "nanodrop 260/280: 2.05", "nanodrop 260/230: 1.09", "rin: 8.3", "total reads: 57394324", "mapped reads: 9077921") SRP034732 SRS519893 SRX399459 SRR1060756 29738972 29738972 1 TRUE FALSE 23199980 1650333223 blood esc 2013-12-26T11:50:20.300 2014-02-28T01:26:44.193 2014-02-28T02:15:13.657 150 GSM1298102 SRR1060756.bw Subject 4 Lane 1 GD c("tissue: blood", "index: ACCCAG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A04", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: FALSE", "Sex: female", "internal_id: 4", "wbc (10e9/l): 4.07", "neu (10e9/l): 1.81", "lym (10e9/l): 1.83", "mono (10e9/l): 0.308", "eos (10e9/l): 0.054", "baso (10e9/l): 0.063", "rbc (10e12/l): 4", "plt (10e9/l): 268", "rna volume (ul): 37.5", "rna amount (ng): 3864.375", "rna concentration (ng/ul): 103.05", "nanodrop 260/280: 2.02", "nanodrop 260/230: 0.72", "rin: 8.2", "total reads: 29738972", "mapped reads: 4091311") SRP034732 SRS519894 SRX399460 SRR1060757 66706078 66706078 1 TRUE FALSE 59615372 4349447724 blood esc 2013-12-26T11:50:08.233 2014-02-28T01:25:38.920 2014-02-28T02:11:18.397 150 GSM1298103 SRR1060757.bw Subject 5 Lane 1 GD c("tissue: blood", "index: AGCGCT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A05", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: FALSE", "Sex: female", "internal_id: 5", "wbc (10e9/l): 8.42", "neu (10e9/l): 6.23", "lym (10e9/l): 1.46", "mono (10e9/l): 0.607", "eos (10e9/l): 0.087", "baso (10e9/l): 0.038", "rbc (10e12/l): 3.96", "plt (10e9/l): 184", "rna volume (ul): 37.5", "rna amount (ng): 4936.5", "rna concentration (ng/ul): 131.64", "nanodrop 260/280: 2.06", "nanodrop 260/230: 1", "rin: 8.4", "total reads: 66706078", "mapped reads: 13171803") SRP034732 SRS519895 SRX399461 SRR1060758 44102130 44102130 1 TRUE FALSE 35531210 2538569303 blood esc 2013-12-26T11:50:14.167 2014-02-28T01:26:17.790 2014-02-28T02:11:18.830 150 GSM1298104 SRR1060758.bw Subject 6 Lane 1 GD c("tissue: blood", "index: CAAAAG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A06", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: FALSE", "Sex: female", "internal_id: 6", "wbc (10e9/l): 4.82", "neu (10e9/l): 2.01", "lym (10e9/l): 1.87", "mono (10e9/l): 0.439", "eos (10e9/l): 0.411", "baso (10e9/l): 0.09", "rbc (10e12/l): 4.27", "plt (10e9/l): 267", "rna volume (ul): 37.5", "rna amount (ng): 3229.875", "rna concentration (ng/ul): 86.13", "nanodrop 260/280: 2.01", "nanodrop 260/230: 0.44", "rin: 8.3", "total reads: 44102130", "mapped reads: 8254961") SRP034732 SRS519896 SRX399462 SRR1060759 47723512 47723512 1 TRUE FALSE 41005918 2955842095 blood esc 2013-12-26T11:50:32.593 2014-02-28T01:26:55.983 2014-02-28T02:15:14.087 150 GSM1298105 SRR1060759.bw RNA Pool 7 Lane 1 GD c("tissue: blood", "index: CGATGT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B01", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 7", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 44.5", "rna amount (ng): 6504.12", "rna concentration (ng/ul): 146.16", "nanodrop 260/280: 2.04", "nanodrop 260/230: 1.1", "rin: 8.1", "total reads: 47723512", "mapped reads: 8784902") SRP034732 SRS519897 SRX399464 SRR1060761 48817428 48817428 1 TRUE FALSE 41322628 2984229246 blood esc 2013-12-26T11:50:26.473 2014-02-28T01:24:44.287 2014-02-28T02:07:13.293 150 GSM1298107 SRR1060761.bw RNA Pool 9 Lane 1 GD c("tissue: blood", "index: AACTTG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B03", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 9", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 44.5", "rna amount (ng): 7318.47", "rna concentration (ng/ul): 164.46", "nanodrop 260/280: 2.05", "nanodrop 260/230: 1.34", "rin: 8", "total reads: 48817428", "mapped reads: 8616625") SRP034732 SRS519898 SRX399463 SRR1060760 14472058 14472058 1 TRUE FALSE 8771277 579514696 blood esc 2013-12-26T11:50:22.277 2014-02-28T01:25:45.247 2014-02-28T02:11:19.243 150 GSM1298106 SRR1060760.bw RNA Pool 8 Lane 1 GD c("tissue: blood", "index: TAGCTT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B02", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 8", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 44.5", "rna amount (ng): 6013.73", "rna concentration (ng/ul): 135.14", "nanodrop 260/280: 2.05", "nanodrop 260/230: 0.68", "rin: 8.1", "total reads: 14472058", "mapped reads: 1649539") SRP034732 SRS519899 SRX399465 SRR1060762 3974798 3974798 1 TRUE FALSE 1724950 100427936 blood esc 2013-12-26T11:50:24.413 2014-02-28T01:23:55.977 2014-02-28T02:07:13.743 150 GSM1298108 SRR1060762.bw RNA Pool 10 Lane 1 GD c("tissue: blood", "index: ACCGGC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B04", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 10", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 45", "rna amount (ng): 4735.8", "rna concentration (ng/ul): 105.24", "nanodrop 260/280: 2.05", "nanodrop 260/230: 0.36", "rin: 8.3", "total reads: 3974798", "mapped reads: 242640") SRP034732 SRS519900 SRX399466 SRR1060763 32289292 32289292 1 TRUE FALSE 27162266 1958078650 blood esc 2013-12-26T11:50:16.203 2014-02-28T01:24:02.230 2014-02-28T02:07:14.147 150 GSM1298109 SRR1060763.bw RNA Pool 11 Lane 1 GD c("tissue: blood", "index: AGGCCG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B05", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 11", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 44.5", "rna amount (ng): 6123.2", "rna concentration (ng/ul): 137.6", "nanodrop 260/280: 2.04", "nanodrop 260/230: 0.9", "rin: 8.2", "total reads: 32289292", "mapped reads: 5648745") SRP034732 SRS519901 SRX399467 SRR1060764 46596040 46596040 1 TRUE FALSE 39107253 2814960247 blood esc 2013-12-26T11:50:30.470 2014-02-28T01:25:02.267 2014-02-28T02:07:14.620 150 GSM1298110 SRR1060764.bw RNA Pool 12 Lane 1 GD c("tissue: blood", "index: CAACTA", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B06", "library: INX745", "flowcell: C0HHGACXX", "lane: 1", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 12", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 44.5", "rna amount (ng): 5493.525", "rna concentration (ng/ul): 123.45", "nanodrop 260/280: 2.06", "nanodrop 260/230: 0.89", "rin: 8.1", "total reads: 46596040", "mapped reads: 8716505") SRP034732 SRS519902 SRX399468 SRR1060765 22044708 22044708 1 TRUE FALSE 12992100 881984519 blood esc 2013-12-26T11:50:34.677 2014-02-28T01:24:08.583 2014-02-28T02:07:15.063 150 GSM1298111 SRR1060765.bw Subject 1 Lane 4 GD c("tissue: blood", "index: ATCACG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A01", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: FALSE", "Sex: male", "internal_id: 1", "wbc (10e9/l): 4.27", "neu (10e9/l): 2.99", "lym (10e9/l): 0.863", "mono (10e9/l): 0.355", "eos (10e9/l): 0.041", "baso (10e9/l): 0.019", "rbc (10e12/l): 4.51", "plt (10e9/l): 164", "rna volume (ul): 35", "rna amount (ng): 1903.3", "rna concentration (ng/ul): 54.38", "nanodrop 260/280: 1.93", "nanodrop 260/230: 0.7", "rin: 8.9", "total reads: 22044708", "mapped reads: 2556261") SRP034732 SRS519903 SRX399469 SRR1060766 64318126 64318126 1 TRUE FALSE 57351017 4167620850 blood esc 2013-12-26T11:50:38.660 2014-02-28T01:23:59.170 2014-02-28T02:07:15.507 150 GSM1298112 SRR1060766.bw Subject 2 Lane 4 GD c("tissue: blood", "index: GATCAG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A02", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: FALSE", "Sex: male", "internal_id: 2", "wbc (10e9/l): 5.27", "neu (10e9/l): 2.98", "lym (10e9/l): 1.16", "mono (10e9/l): 0.751", "eos (10e9/l): 0.311", "baso (10e9/l): 0.066", "rbc (10e12/l): 4.66", "plt (10e9/l): 256", "rna volume (ul): 38.5", "rna amount (ng): 4062.135", "rna concentration (ng/ul): 105.51", "nanodrop 260/280: 2.05", "nanodrop 260/230: 0.45", "rin: 8.7", "total reads: 64318126", "mapped reads: 11706045") SRP034732 SRS519904 SRX399470 SRR1060767 50924062 50924062 1 TRUE FALSE 43269145 3117152172 blood esc 2013-12-26T11:50:36.680 2014-02-28T01:24:55.937 2014-02-28T02:07:15.960 150 GSM1298113 SRR1060767.bw Subject 3 Lane 4 GD c("tissue: blood", "index: AACCCC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A03", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: FALSE", "Sex: male", "internal_id: 3", "wbc (10e9/l): 5.52", "neu (10e9/l): 2.54", "lym (10e9/l): 2.31", "mono (10e9/l): 0.542", "eos (10e9/l): 0.086", "baso (10e9/l): 0.046", "rbc (10e12/l): 4.9", "plt (10e9/l): 259", "rna volume (ul): 37.5", "rna amount (ng): 5010", "rna concentration (ng/ul): 133.6", "nanodrop 260/280: 2.05", "nanodrop 260/230: 1.09", "rin: 8.3", "total reads: 50924062", "mapped reads: 7905360") SRP034732 SRS519905 SRX399471 SRR1060768 26910238 26910238 1 TRUE FALSE 20729915 1457514903 blood esc 2013-12-26T11:50:46.740 2014-02-28T01:24:05.347 2014-02-28T02:07:16.720 150 GSM1298114 SRR1060768.bw Subject 4 Lane 4 GD c("tissue: blood", "index: ACCCAG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A04", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: FALSE", "Sex: female", "internal_id: 4", "wbc (10e9/l): 4.07", "neu (10e9/l): 1.81", "lym (10e9/l): 1.83", "mono (10e9/l): 0.308", "eos (10e9/l): 0.054", "baso (10e9/l): 0.063", "rbc (10e12/l): 4", "plt (10e9/l): 268", "rna volume (ul): 37.5", "rna amount (ng): 3864.375", "rna concentration (ng/ul): 103.05", "nanodrop 260/280: 2.02", "nanodrop 260/230: 0.72", "rin: 8.2", "total reads: 26910238", "mapped reads: 3569174") SRP034732 SRS519906 SRX399472 SRR1060769 59570508 59570508 1 TRUE FALSE 53010772 3848108581 blood esc 2013-12-26T11:50:52.740 2014-02-28T01:24:17.583 2014-02-28T02:07:17.340 150 GSM1298115 SRR1060769.bw Subject 5 Lane 4 GD c("tissue: blood", "index: AGCGCT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A05", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: FALSE", "Sex: female", "internal_id: 5", "wbc (10e9/l): 8.42", "neu (10e9/l): 6.23", "lym (10e9/l): 1.46", "mono (10e9/l): 0.607", "eos (10e9/l): 0.087", "baso (10e9/l): 0.038", "rbc (10e12/l): 3.96", "plt (10e9/l): 184", "rna volume (ul): 37.5", "rna amount (ng): 4936.5", "rna concentration (ng/ul): 131.64", "nanodrop 260/280: 2.06", "nanodrop 260/230: 1", "rin: 8.4", "total reads: 59570508", "mapped reads: 11636705") SRP034732 SRS519907 SRX399473 SRR1060770 39274662 39274662 1 TRUE FALSE 31262589 2208411257 blood esc 2013-12-26T11:50:48.723 2014-02-28T01:25:15.113 2014-02-28T02:11:19.660 150 GSM1298116 SRR1060770.bw Subject 6 Lane 4 GD c("tissue: blood", "index: CAAAAG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A06", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: FALSE", "Sex: female", "internal_id: 6", "wbc (10e9/l): 4.82", "neu (10e9/l): 2.01", "lym (10e9/l): 1.87", "mono (10e9/l): 0.439", "eos (10e9/l): 0.411", "baso (10e9/l): 0.09", "rbc (10e12/l): 4.27", "plt (10e9/l): 267", "rna volume (ul): 37.5", "rna amount (ng): 3229.875", "rna concentration (ng/ul): 86.13", "nanodrop 260/280: 2.01", "nanodrop 260/230: 0.44", "rin: 8.3", "total reads: 39274662", "mapped reads: 7142974") SRP034732 SRS519908 SRX399474 SRR1060771 42935400 42935400 1 TRUE FALSE 36443473 2604047885 blood esc 2013-12-26T11:50:40.597 2014-02-28T01:24:14.447 2014-02-28T02:07:17.877 150 GSM1298117 SRR1060771.bw RNA Pool 7 Lane 4 GD c("tissue: blood", "index: CGATGT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B01", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 7", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 44.5", "rna amount (ng): 6504.12", "rna concentration (ng/ul): 146.16", "nanodrop 260/280: 2.04", "nanodrop 260/230: 1.1", "rin: 8.1", "total reads: 42935400", "mapped reads: 7699285") SRP034732 SRS519909 SRX399475 SRR1060772 13683826 13683826 1 TRUE FALSE 8111742 516540150 blood esc 2013-12-26T11:50:42.557 2014-02-28T01:24:28.767 2014-02-28T02:07:18.307 150 GSM1298118 SRR1060772.bw RNA Pool 8 Lane 4 GD c("tissue: blood", "index: TAGCTT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B02", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 8", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 44.5", "rna amount (ng): 6013.73", "rna concentration (ng/ul): 135.14", "nanodrop 260/280: 2.05", "nanodrop 260/230: 0.68", "rin: 8.1", "total reads: 13683826", "mapped reads: 1438087") SRP034732 SRS519910 SRX399476 SRR1060773 43229734 43229734 1 TRUE FALSE 36376878 2608313526 blood esc 2013-12-26T11:50:50.710 2014-02-28T01:25:18.447 2014-02-28T02:11:20.070 150 GSM1298119 SRR1060773.bw RNA Pool 9 Lane 4 GD c("tissue: blood", "index: AACTTG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B03", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 9", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 44.5", "rna amount (ng): 7318.47", "rna concentration (ng/ul): 164.46", "nanodrop 260/280: 2.05", "nanodrop 260/230: 1.34", "rin: 8", "total reads: 43229734", "mapped reads: 7501586") SRP034732 SRS519911 SRX399477 SRR1060774 4119672 4119672 1 TRUE FALSE 1747139 94392620 blood esc 2013-12-26T11:50:44.583 2014-02-28T01:24:20.837 2014-02-28T02:07:18.753 150 GSM1298120 SRR1060774.bw RNA Pool 10 Lane 4 GD c("tissue: blood", "index: ACCGGC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B04", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 10", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 45", "rna amount (ng): 4735.8", "rna concentration (ng/ul): 105.24", "nanodrop 260/280: 2.05", "nanodrop 260/230: 0.36", "rin: 8.3", "total reads: 4119672", "mapped reads: 213271") SRP034732 SRS519912 SRX399478 SRR1060775 29066812 29066812 1 TRUE FALSE 24196076 1728671584 blood esc 2013-12-26T11:50:58.897 2014-02-28T01:24:35.580 2014-02-28T02:07:19.183 150 GSM1298121 SRR1060775.bw RNA Pool 11 Lane 4 GD c("tissue: blood", "index: AGGCCG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B05", "library: INX745", "flowcell: C0W2GACXX", "lane: 4", "treatment: GD", "pool: TRUE", "Sex: NA", "internal_id: 11", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 44.5", "rna amount (ng): 6123.2", "rna concentration (ng/ul): 137.6", "nanodrop 260/280: 2.04", "nanodrop 260/230: 0.9", "rin: 8.2", "total reads: 29066812", "mapped reads: 4954621") SRP034732 SRS519913 SRX399479 SRR1060776 56042902 56042902 1 TRUE FALSE 48033760 3545952939 blood esc 2013-12-26T11:50:54.740 2014-02-28T01:25:22.740 2014-02-28T02:11:20.517 150 GSM1298122 SRR1060776.bw Subject 1 Lane 2 NGD c("tissue: blood", "index: CCAACA", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A07", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: FALSE", "Sex: male", "internal_id: 13", "wbc (10e9/l): 4.27", "neu (10e9/l): 2.99", "lym (10e9/l): 0.863", "mono (10e9/l): 0.355", "eos (10e9/l): 0.041", "baso (10e9/l): 0.019", "rbc (10e12/l): 4.51", "plt (10e9/l): 164", "rna volume (ul): 112.1", "rna amount (ng): 3550.207", "rna concentration (ng/ul): 31.67", "nanodrop 260/280: 2.05", "nanodrop 260/230: 1.07", "rin: 8.3", "total reads: 56042902", "mapped reads: 8239863") SRP034732 SRS519914 SRX399480 SRR1060777 73540008 73540008 1 TRUE FALSE 69689377 5168771166 blood esc 2013-12-26T11:51:09.063 2014-02-28T01:24:32.303 2014-02-28T02:07:19.630 150 GSM1298123 SRR1060777.bw Subject 2 Lane 2 NGD c("tissue: blood", "index: CTAGCT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A08", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: FALSE", "Sex: male", "internal_id: 14", "wbc (10e9/l): 5.27", "neu (10e9/l): 2.98", "lym (10e9/l): 1.16", "mono (10e9/l): 0.751", "eos (10e9/l): 0.311", "baso (10e9/l): 0.066", "rbc (10e12/l): 4.66", "plt (10e9/l): 256", "rna volume (ul): 107.1", "rna amount (ng): 8747.928", "rna concentration (ng/ul): 81.68", "nanodrop 260/280: 2.06", "nanodrop 260/230: 1.48", "rin: 9", "total reads: 73540008", "mapped reads: 11557700") SRP034732 SRS519915 SRX399481 SRR1060778 57469756 57469756 1 TRUE FALSE 53973104 3989522607 blood esc 2013-12-26T11:50:56.797 2014-02-28T01:24:38.763 2014-02-28T02:07:20.113 150 GSM1298124 SRR1060778.bw Subject 3 Lane 2 NGD c("tissue: blood", "index: GATGCT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A09", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: FALSE", "Sex: male", "internal_id: 15", "wbc (10e9/l): 5.52", "neu (10e9/l): 2.54", "lym (10e9/l): 2.31", "mono (10e9/l): 0.542", "eos (10e9/l): 0.086", "baso (10e9/l): 0.046", "rbc (10e12/l): 4.9", "plt (10e9/l): 259", "rna volume (ul): 113.5", "rna amount (ng): 9288.84", "rna concentration (ng/ul): 81.84", "nanodrop 260/280: 2.11", "nanodrop 260/230: 1.51", "rin: 8.8", "total reads: 57469756", "mapped reads: 9215488") SRP034732 SRS519917 SRX399483 SRR1060780 50565086 50565086 1 TRUE FALSE 47719245 3525745916 blood esc 2013-12-26T11:51:06.970 2014-02-28T01:24:50.547 2014-02-28T02:07:20.570 150 GSM1298126 SRR1060780.bw Subject 5 Lane 2 NGD c("tissue: blood", "index: TGAATG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A11", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: FALSE", "Sex: female", "internal_id: 17", "wbc (10e9/l): 8.42", "neu (10e9/l): 6.23", "lym (10e9/l): 1.46", "mono (10e9/l): 0.607", "eos (10e9/l): 0.087", "baso (10e9/l): 0.038", "rbc (10e12/l): 3.96", "plt (10e9/l): 184", "rna volume (ul): 113.1", "rna amount (ng): 9195.03", "rna concentration (ng/ul): 81.3", "nanodrop 260/280: 2.11", "nanodrop 260/230: 1.25", "rin: 9", "total reads: 50565086", "mapped reads: 8064231") SRP034732 SRS519919 SRX399485 SRR1060782 38841204 38841204 1 TRUE FALSE 36551952 2698820685 blood esc 2013-12-26T11:51:13.160 2014-02-28T01:25:29.270 2014-02-28T02:11:21.357 150 GSM1298128 SRR1060782.bw RNA Pool 19 Lane 2 NGD c("tissue: blood", "index: CCACGC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B07", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 19", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 10398.258", "rna concentration (ng/ul): 72.06", "nanodrop 260/280: 2.07", "nanodrop 260/230: 1.28", "rin: 8.7", "total reads: 38841204", "mapped reads: 5942237") SRP034732 SRS519920 SRX399486 SRR1060783 31417390 31417390 1 TRUE FALSE 29031741 2136312633 blood esc 2013-12-26T11:51:15.333 2014-02-28T01:24:59.000 2014-02-28T02:07:21.480 150 GSM1298129 SRR1060783.bw RNA Pool 20 Lane 2 NGD c("tissue: blood", "index: CTATAC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B08", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 20", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 9754.68", "rna concentration (ng/ul): 67.6", "nanodrop 260/280: 2.07", "nanodrop 260/230: 1.38", "rin: 8.8", "total reads: 31417390", "mapped reads: 5006047") SRP034732 SRS519921 SRX399487 SRR1060784 25862276 25862276 1 TRUE FALSE 24505883 1811092921 blood esc 2013-12-26T11:51:11.117 2014-02-28T01:25:05.517 2014-02-28T02:07:21.970 150 GSM1298130 SRR1060784.bw RNA Pool 21 Lane 2 NGD c("tissue: blood", "index: GCAAGG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B09", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 21", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 10907.637", "rna concentration (ng/ul): 75.59", "nanodrop 260/280: 2.08", "nanodrop 260/230: 1.3", "rin: 8.8", "total reads: 25862276", "mapped reads: 4329130") SRP034732 SRS519922 SRX399488 SRR1060785 27867920 27867920 1 TRUE FALSE 25692109 1890129874 blood esc 2013-12-26T11:51:04.970 2014-02-28T01:26:11.090 2014-02-28T02:11:21.857 150 GSM1298131 SRR1060785.bw RNA Pool 22 Lane 2 NGD c("tissue: blood", "index: TACAGC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B10", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 22", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 10606.05", "rna concentration (ng/ul): 73.5", "nanodrop 260/280: 2.07", "nanodrop 260/230: 1.36", "rin: 8.8", "total reads: 27867920", "mapped reads: 4386262") SRP034732 SRS519923 SRX399489 SRR1060786 29072182 29072182 1 TRUE FALSE 27095576 1996585662 blood esc 2013-12-26T11:51:19.960 2014-02-28T01:25:08.697 2014-02-28T02:07:22.440 150 GSM1298132 SRR1060786.bw RNA Pool 23 Lane 2 NGD c("tissue: blood", "index: TGCCAT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B11", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 23", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 10134.189", "rna concentration (ng/ul): 70.23", "nanodrop 260/280: 2.06", "nanodrop 260/230: 1.4", "rin: 8.8", "total reads: 29072182", "mapped reads: 4847877") SRP034732 SRS519924 SRX399490 SRR1060787 23474520 23474520 1 TRUE FALSE 21392704 1569937701 blood esc 2013-12-26T11:51:17.977 2014-02-28T01:25:42.033 2014-02-28T02:11:22.710 150 GSM1298133 SRR1060787.bw RNA Pool 24 Lane 2 NGD c("tissue: blood", "index: ATGTCA", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B12", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 24", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 9666.657", "rna concentration (ng/ul): 66.99", "nanodrop 260/280: 2.1", "nanodrop 260/230: 1.47", "rin: 8.6", "total reads: 23474520", "mapped reads: 3595142") SRP034732 SRS519925 SRX399491 SRR1060788 51996970 51996970 1 TRUE FALSE 44389445 3268108077 blood esc 2013-12-26T11:51:23.987 2014-02-28T01:26:27.253 2014-02-28T02:11:23.153 150 GSM1298134 SRR1060788.bw Subject 1 Lane 5 NGD c("tissue: blood", "index: CCAACA", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A07", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: FALSE", "Sex: male", "internal_id: 13", "wbc (10e9/l): 4.27", "neu (10e9/l): 2.99", "lym (10e9/l): 0.863", "mono (10e9/l): 0.355", "eos (10e9/l): 0.041", "baso (10e9/l): 0.019", "rbc (10e12/l): 4.51", "plt (10e9/l): 164", "rna volume (ul): 112.1", "rna amount (ng): 3550.207", "rna concentration (ng/ul): 31.67", "nanodrop 260/280: 2.05", "nanodrop 260/230: 1.07", "rin: 8.3", "total reads: 51996970", "mapped reads: 7558904") SRP034732 SRS519926 SRX399492 SRR1060789 68005146 68005146 1 TRUE FALSE 64250298 4754831303 blood esc 2013-12-26T11:51:21.983 2014-02-28T01:25:11.917 2014-02-28T02:07:22.893 150 GSM1298135 SRR1060789.bw Subject 2 Lane 5 NGD c("tissue: blood", "index: CTAGCT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A08", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: FALSE", "Sex: male", "internal_id: 14", "wbc (10e9/l): 5.27", "neu (10e9/l): 2.98", "lym (10e9/l): 1.16", "mono (10e9/l): 0.751", "eos (10e9/l): 0.311", "baso (10e9/l): 0.066", "rbc (10e12/l): 4.66", "plt (10e9/l): 256", "rna volume (ul): 107.1", "rna amount (ng): 8747.928", "rna concentration (ng/ul): 81.68", "nanodrop 260/280: 2.06", "nanodrop 260/230: 1.48", "rin: 9", "total reads: 68005146", "mapped reads: 10578212") SRP034732 SRS519927 SRX399493 SRR1060790 52680586 52680586 1 TRUE FALSE 49250344 3630185524 blood esc 2013-12-26T11:51:26.057 2014-02-28T01:25:48.490 2014-02-28T02:11:23.660 150 GSM1298136 SRR1060790.bw Subject 3 Lane 5 NGD c("tissue: blood", "index: GATGCT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A09", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: FALSE", "Sex: male", "internal_id: 15", "wbc (10e9/l): 5.52", "neu (10e9/l): 2.54", "lym (10e9/l): 2.31", "mono (10e9/l): 0.542", "eos (10e9/l): 0.086", "baso (10e9/l): 0.046", "rbc (10e12/l): 4.9", "plt (10e9/l): 259", "rna volume (ul): 113.5", "rna amount (ng): 9288.84", "rna concentration (ng/ul): 81.84", "nanodrop 260/280: 2.11", "nanodrop 260/230: 1.51", "rin: 8.8", "total reads: 52680586", "mapped reads: 8333702") SRP034732 SRS519928 SRX399494 SRR1060791 39941768 39941768 1 TRUE FALSE 37110561 2731503025 blood esc 2013-12-26T11:51:29.957 2014-02-28T01:25:51.620 2014-02-28T02:11:24.167 150 GSM1298137 SRR1060791.bw Subject 4 Lane 5 NGD c("tissue: blood", "index: TAATCG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A10", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: FALSE", "Sex: female", "internal_id: 16", "wbc (10e9/l): 4.07", "neu (10e9/l): 1.81", "lym (10e9/l): 1.83", "mono (10e9/l): 0.308", "eos (10e9/l): 0.054", "baso (10e9/l): 0.063", "rbc (10e12/l): 4", "plt (10e9/l): 268", "rna volume (ul): 113", "rna amount (ng): 6821.81", "rna concentration (ng/ul): 60.37", "nanodrop 260/280: 2.13", "nanodrop 260/230: 1.46", "rin: 8.8", "total reads: 39941768", "mapped reads: 6321015") SRP034732 SRS519929 SRX399495 SRR1060792 48975584 48975584 1 TRUE FALSE 46064644 3395075823 blood esc 2013-12-26T11:51:31.907 2014-02-28T01:26:33.837 2014-02-28T02:11:24.643 150 GSM1298138 SRR1060792.bw Subject 5 Lane 5 NGD c("tissue: blood", "index: TGAATG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A11", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: FALSE", "Sex: female", "internal_id: 17", "wbc (10e9/l): 8.42", "neu (10e9/l): 6.23", "lym (10e9/l): 1.46", "mono (10e9/l): 0.607", "eos (10e9/l): 0.087", "baso (10e9/l): 0.038", "rbc (10e12/l): 3.96", "plt (10e9/l): 184", "rna volume (ul): 113.1", "rna amount (ng): 9195.03", "rna concentration (ng/ul): 81.3", "nanodrop 260/280: 2.11", "nanodrop 260/230: 1.25", "rin: 9", "total reads: 48975584", "mapped reads: 7735629") SRP034732 SRS519930 SRX399496 SRR1060793 39234268 39234268 1 TRUE FALSE 36600757 2692576027 blood esc 2013-12-26T11:51:28.023 2014-02-28T01:26:58.200 2014-02-28T02:15:14.543 150 GSM1298139 SRR1060793.bw Subject 6 Lane 5 NGD c("tissue: blood", "index: AGTTCC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A12", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: FALSE", "Sex: female", "internal_id: 18", "wbc (10e9/l): 4.82", "neu (10e9/l): 2.01", "lym (10e9/l): 1.87", "mono (10e9/l): 0.439", "eos (10e9/l): 0.411", "baso (10e9/l): 0.09", "rbc (10e12/l): 4.27", "plt (10e9/l): 267", "rna volume (ul): 113.1", "rna amount (ng): 6850.467", "rna concentration (ng/ul): 60.57", "nanodrop 260/280: 2.11", "nanodrop 260/230: 1.62", "rin: 8.8", "total reads: 39234268", "mapped reads: 6755183") SRP034732 SRS519931 SRX399497 SRR1060794 36429236 36429236 1 TRUE FALSE 34145182 2514398766 blood esc 2013-12-26T11:51:35.797 2014-02-28T01:27:09.770 2014-02-28T02:15:14.883 150 GSM1298140 SRR1060794.bw RNA Pool 19 Lane 5 NGD c("tissue: blood", "index: CCACGC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B07", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 19", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 10398.258", "rna concentration (ng/ul): 72.06", "nanodrop 260/280: 2.07", "nanodrop 260/230: 1.28", "rin: 8.7", "total reads: 36429236", "mapped reads: 5499838") SRP034732 SRS519932 SRX399498 SRR1060795 28667394 28667394 1 TRUE FALSE 26332274 1931437842 blood esc 2013-12-26T11:51:41.950 2014-02-28T01:27:17.117 2014-02-28T02:15:15.220 150 GSM1298141 SRR1060795.bw RNA Pool 20 Lane 5 NGD c("tissue: blood", "index: CTATAC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B08", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 20", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 9754.68", "rna concentration (ng/ul): 67.6", "nanodrop 260/280: 2.07", "nanodrop 260/230: 1.38", "rin: 8.8", "total reads: 28667394", "mapped reads: 4503435") SRP034732 SRS519933 SRX399499 SRR1060796 24984926 24984926 1 TRUE FALSE 23593638 1739594861 blood esc 2013-12-26T11:51:33.850 2014-02-28T01:25:54.697 2014-02-28T02:11:25.150 150 GSM1298142 SRR1060796.bw RNA Pool 21 Lane 5 NGD c("tissue: blood", "index: GCAAGG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B09", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 21", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 10907.637", "rna concentration (ng/ul): 75.59", "nanodrop 260/280: 2.08", "nanodrop 260/230: 1.3", "rin: 8.8", "total reads: 24984926", "mapped reads: 4145118") SRP034732 SRS519934 SRX399500 SRR1060797 26274928 26274928 1 TRUE FALSE 24047253 1762540756 blood esc 2013-12-26T11:51:37.803 2014-02-28T01:26:20.587 2014-02-28T02:11:25.613 150 GSM1298143 SRR1060797.bw RNA Pool 22 Lane 5 NGD c("tissue: blood", "index: TACAGC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B10", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 22", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 10606.05", "rna concentration (ng/ul): 73.5", "nanodrop 260/280: 2.07", "nanodrop 260/230: 1.36", "rin: 8.8", "total reads: 26274928", "mapped reads: 4062916") SRP034732 SRS519935 SRX399501 SRR1060798 27807042 27807042 1 TRUE FALSE 25765063 1892860823 blood esc 2013-12-26T11:51:43.973 2014-02-28T01:26:04.733 2014-02-28T02:11:26.067 150 GSM1298144 SRR1060798.bw RNA Pool 23 Lane 5 NGD c("tissue: blood", "index: TGCCAT", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B11", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 23", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 10134.189", "rna concentration (ng/ul): 70.23", "nanodrop 260/280: 2.06", "nanodrop 260/230: 1.4", "rin: 8.8", "total reads: 27807042", "mapped reads: 1149450") SRP034732 SRS519936 SRX399502 SRR1060799 22268532 22268532 1 TRUE FALSE 20150154 1472504881 blood esc 2013-12-26T11:51:39.897 2014-02-28T01:26:07.970 2014-02-28T02:11:26.513 150 GSM1298145 SRR1060799.bw RNA Pool 24 Lane 5 NGD c("tissue: blood", "index: ATGTCA", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: B12", "library: INX746", "flowcell: C0LABACXX", "lane: 5", "treatment: NGD", "pool: TRUE", "Sex: NA", "internal_id: 24", "wbc (10e9/l): NA", "neu (10e9/l): NA", "lym (10e9/l): NA", "mono (10e9/l): NA", "eos (10e9/l): NA", "baso (10e9/l): NA", "rbc (10e12/l): NA", "plt (10e9/l): NA", "rna volume (ul): 144.3", "rna amount (ng): 9666.657", "rna concentration (ng/ul): 66.99", "nanodrop 260/280: 2.1", "nanodrop 260/230: 1.47", "rin: 8.6", "total reads: 22268532", "mapped reads: 3356528") SRP034732 SRS519916 SRX399482 SRR1060779 42200816 0 0 TRUE FALSE 0 NA blood esc 2013-12-26T11:51:02.970 2014-02-28T01:25:25.840 2014-02-28T02:11:20.940 150 GSM1298125 NA Subject 4 Lane 2 NGD c("tissue: blood", "index: TAATCG", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A10", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: FALSE", "Sex: female", "internal_id: 16", "wbc (10e9/l): 4.07", "neu (10e9/l): 1.81", "lym (10e9/l): 1.83", "mono (10e9/l): 0.308", "eos (10e9/l): 0.054", "baso (10e9/l): 0.063", "rbc (10e12/l): 4", "plt (10e9/l): 268", "rna volume (ul): 113", "rna amount (ng): 6821.81", "rna concentration (ng/ul): 60.37", "nanodrop 260/280: 2.13", "nanodrop 260/230: 1.46", "rin: 8.8", "total reads: 42200816", "mapped reads: 6762201") SRP034732 SRS519918 SRX399484 SRR1060781 41632824 0 0 TRUE FALSE 0 NA blood esc 2013-12-26T11:51:00.843 2014-02-28T01:24:47.450 2014-02-28T02:07:21.003 150 GSM1298127 NA Subject 6 Lane 2 NGD c("tissue: blood", "index: AGTTCC", "upper_protocol: SLX-Transcriptome", "lower_protocol: Illumina Index", "taxonomy_id: 9606", "well_location: A12", "library: INX746", "flowcell: C0HHGACXX", "lane: 2", "treatment: NGD", "pool: FALSE", "Sex: female", "internal_id: 18", "wbc (10e9/l): 4.82", "neu (10e9/l): 2.01", "lym (10e9/l): 1.87", "mono (10e9/l): 0.439", "eos (10e9/l): 0.411", "baso (10e9/l): 0.09", "rbc (10e12/l): 4.27", "plt (10e9/l): 267", "rna volume (ul): 113.1", "rna amount (ng): 6850.467", "rna concentration (ng/ul): 60.57", "nanodrop 260/280: 2.11", "nanodrop 260/230: 1.62", "rin: 8.8", "total reads: 41632824", "mapped reads: 7252734")