project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP036821 SRS553940 SRX466177 SRR1163240 31696632 31696632 1 FALSE FALSE 14127702 462824832 NA NA 2014-02-06T11:31:10.197 2016-01-25T01:11:42.470 2016-01-25T01:14:36.613 36 GSM1322929 SRR1163240.bw STT5959_GIST_WT c("tissue: soft tissue sarcoma", "tissue subtype: GIST WT", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553941 SRX466178 SRR1163241 28371186 28371186 1 FALSE FALSE 10149261 270924904 NA NA 2014-02-06T11:30:54.967 2016-01-25T01:11:43.760 2016-01-25T01:14:36.367 36 GSM1322930 SRR1163241.bw STT5962_GIST_WT c("tissue: soft tissue sarcoma", "tissue subtype: GIST WT", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553942 SRX466179 SRR1163242 29255263 29255263 1 FALSE FALSE 9732900 287136058 NA NA 2014-02-06T11:30:52.580 2016-01-25T01:11:44.700 2016-01-25T01:14:36.130 36 GSM1322931 SRR1163242.bw STT5963_GIST_WT c("tissue: soft tissue sarcoma", "tissue subtype: GIST WT", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553943 SRX466180 SRR1163243 21814567 21814567 1 FALSE FALSE 8573925 266615622 NA NA 2014-02-06T11:31:07.367 2016-01-25T01:11:45.407 2016-01-25T01:14:35.870 36 GSM1322932 SRR1163243.bw STT5965_GIST_WT c("tissue: soft tissue sarcoma", "tissue subtype: GIST WT", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553944 SRX466181 SRR1163244 16114158 16114158 1 FALSE FALSE 2002155 71019831 NA NA 2014-02-06T11:31:00.597 2016-01-25T01:10:02.873 2016-01-25T01:14:35.637 36 GSM1322933 SRR1163244.bw STT5966_GIST_WT c("tissue: soft tissue sarcoma", "tissue subtype: GIST WT", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553945 SRX466182 SRR1163245 30948336 30948336 1 FALSE FALSE 8800738 275492405 NA NA 2014-02-06T11:31:08.787 2016-01-25T01:11:27.930 2016-01-25T01:14:35.390 36 GSM1322934 SRR1163245.bw STT5967_GIST_WT c("tissue: soft tissue sarcoma", "tissue subtype: GIST WT", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553946 SRX466183 SRR1163246 14528470 14528470 1 FALSE FALSE 9806221 329598724 NA NA 2014-02-06T11:31:14.987 2016-01-25T01:11:28.787 2016-01-25T01:14:35.163 36 GSM1322935 SRR1163246.bw STT5519_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553947 SRX466184 SRR1163247 16927858 16927858 1 FALSE FALSE 9947220 336285716 NA NA 2014-02-06T11:31:12.837 2016-01-25T01:11:29.547 2016-01-25T01:14:34.943 36 GSM1322936 SRR1163247.bw STT5520_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553948 SRX466186 SRR1163249 22525260 22525260 1 FALSE FALSE 16196357 526933464 NA NA 2014-02-06T11:31:23.537 2016-01-25T01:11:31.147 2016-01-25T01:14:34.703 36 GSM1322938 SRR1163249.bw STT5543_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553949 SRX466185 SRR1163248 17046643 17046643 1 FALSE FALSE 9001921 306814068 NA NA 2014-02-06T11:31:11.483 2016-01-25T01:11:30.323 2016-01-25T01:14:34.400 36 GSM1322937 SRR1163248.bw STT5521_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553950 SRX466187 SRR1163250 33485012 33485012 1 FALSE FALSE 29928010 1022445296 NA NA 2014-02-06T11:31:33.047 2016-01-25T01:11:31.977 2016-01-25T01:14:34.100 36 GSM1322939 SRR1163250.bw STT5774_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553951 SRX466188 SRR1163251 34940415 34940415 1 FALSE FALSE 32499623 1115793336 NA NA 2014-02-06T11:31:41.800 2016-01-25T01:11:33.287 2016-01-25T01:14:33.837 36 GSM1322940 SRR1163251.bw STT5775_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553952 SRX466189 SRR1163252 29494631 29494631 1 FALSE FALSE 19900707 674045662 NA NA 2014-02-06T11:31:25.827 2016-01-25T01:11:34.053 2016-01-25T01:14:33.580 36 GSM1322941 SRR1163252.bw STT5776_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553953 SRX466190 SRR1163253 30467910 30467910 1 FALSE FALSE 14763269 459308305 NA NA 2014-02-06T11:31:30.383 2016-01-25T01:11:35.313 2016-01-25T01:14:31.680 36 GSM1322942 SRR1163253.bw STT5864_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553954 SRX466191 SRR1163254 29588555 29588555 1 FALSE FALSE 11181699 343991525 NA NA 2014-02-06T11:31:16.257 2016-01-25T01:11:36.157 2016-01-25T01:14:31.447 36 GSM1322943 SRR1163254.bw STT5865_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553955 SRX466192 SRR1163255 29650853 29650853 1 FALSE FALSE 26763124 895823940 NA NA 2014-02-06T11:31:21.003 2016-01-25T01:10:07.987 2016-01-25T01:14:31.157 36 GSM1322944 SRR1163255.bw STT5866_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553956 SRX466193 SRR1163256 21434080 21434080 1 FALSE FALSE 12145332 389364628 NA NA 2014-02-06T11:31:28.083 2016-01-25T01:11:01.960 2016-01-25T01:14:30.787 36 GSM1322945 SRR1163256.bw STT5867_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553957 SRX466194 SRR1163257 27926075 27926075 1 FALSE FALSE 8438599 242931044 NA NA 2014-02-06T11:31:19.653 2016-01-25T01:11:03.300 2016-01-25T01:14:30.547 36 GSM1322946 SRR1163257.bw STT5868_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553958 SRX466195 SRR1163258 33626948 33626948 1 FALSE FALSE 22705767 747025049 NA NA 2014-02-06T11:31:44.843 2016-01-25T01:11:04.217 2016-01-25T01:14:30.310 36 GSM1322947 SRR1163258.bw STT5869_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553959 SRX466196 SRR1163259 24651736 24651736 1 FALSE FALSE 20557718 679024779 NA NA 2014-02-06T11:31:55.530 2016-01-25T01:11:05.103 2016-01-25T01:14:30.060 36 GSM1322948 SRR1163259.bw STT5870_ESS c("tissue: soft tissue sarcoma", "tissue subtype: ESS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553960 SRX466197 SRR1163260 16738141 16738141 1 FALSE FALSE 11140659 370855648 NA NA 2014-02-06T11:31:17.630 2016-01-25T01:11:06.043 2016-01-25T01:14:29.830 36 GSM1322949 SRR1163260.bw STT5517_DDLPS c("tissue: soft tissue sarcoma", "tissue subtype: DDLPS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553961 SRX466198 SRR1163261 15503261 15503261 1 FALSE FALSE 7305752 241070522 NA NA 2014-02-06T11:32:00.447 2016-01-25T01:11:06.860 2016-01-25T01:14:29.597 36 GSM1322950 SRR1163261.bw STT5518_DDLPS c("tissue: soft tissue sarcoma", "tissue subtype: DDLPS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553962 SRX466200 SRR1163263 14574603 14574603 1 FALSE FALSE 7065690 229225501 NA NA 2014-02-06T11:31:52.880 2016-01-25T01:11:10.677 2016-01-25T01:14:29.370 36 GSM1322952 SRR1163263.bw STT5531_MLPS c("tissue: soft tissue sarcoma", "tissue subtype: MLPS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553963 SRX466199 SRR1163262 17370014 17370014 1 FALSE FALSE 7913804 266608296 NA NA 2014-02-06T11:31:35.270 2016-01-25T01:11:09.820 2016-01-25T01:14:29.130 36 GSM1322951 SRR1163262.bw STT5534_DDLPS c("tissue: soft tissue sarcoma", "tissue subtype: DDLPS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553964 SRX466202 SRR1163265 21103429 21103429 1 FALSE FALSE 17083670 579860698 NA NA 2014-02-06T11:31:48.083 2016-01-25T01:11:12.527 2016-01-25T01:14:28.850 36 GSM1322954 SRR1163265.bw STT5591_MLPS c("tissue: soft tissue sarcoma", "tissue subtype: MLPS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553965 SRX466201 SRR1163264 21000764 21000764 1 FALSE FALSE 16829820 565930638 NA NA 2014-02-06T11:31:58.150 2016-01-25T01:11:11.600 2016-01-25T01:14:26.590 36 GSM1322953 SRR1163264.bw STT5590_MLPS c("tissue: soft tissue sarcoma", "tissue subtype: MLPS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553966 SRX466204 SRR1163267 15511465 15511465 1 FALSE FALSE 11731794 381947711 NA NA 2014-02-06T11:31:50.337 2016-01-25T01:11:14.093 2016-01-25T01:14:26.310 36 GSM1322956 SRR1163267.bw STT5596_MLPS c("tissue: soft tissue sarcoma", "tissue subtype: MLPS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553967 SRX466203 SRR1163266 14762979 14762979 1 FALSE FALSE 9956139 315345456 NA NA 2014-02-06T11:31:39.193 2016-01-25T01:11:13.270 2016-01-25T01:14:26.037 36 GSM1322955 SRR1163266.bw STT5595_MLPS c("tissue: soft tissue sarcoma", "tissue subtype: MLPS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553968 SRX466205 SRR1163268 15160299 15160299 1 FALSE FALSE 8957779 300822310 NA NA 2014-02-06T11:30:56.203 2016-01-25T01:11:15.363 2016-01-25T01:14:25.803 36 GSM1322957 SRR1163268.bw STT5525_EMC c("tissue: soft tissue sarcoma", "tissue subtype: EMC", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553969 SRX466206 SRR1163269 14968313 14968313 1 FALSE FALSE 10120080 335916033 NA NA 2014-02-06T11:31:05.867 2016-01-25T01:11:16.573 2016-01-25T01:14:25.573 36 GSM1322958 SRR1163269.bw STT5526_EMC c("tissue: soft tissue sarcoma", "tissue subtype: EMC", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553970 SRX466207 SRR1163270 14805484 14805484 1 FALSE FALSE 6613286 209278071 NA NA 2014-02-06T11:30:27.350 2016-01-25T01:11:17.363 2016-01-25T01:14:25.337 36 GSM1322959 SRR1163270.bw STT5527_EMC c("tissue: soft tissue sarcoma", "tissue subtype: EMC", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553971 SRX466208 SRR1163271 22051850 22051850 1 FALSE FALSE 18570978 638542001 NA NA 2014-02-06T11:30:24.793 2016-01-25T01:11:18.140 2016-01-25T01:14:25.097 36 GSM1322960 SRR1163271.bw STT5592_EMC c("tissue: soft tissue sarcoma", "tissue subtype: EMC", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553972 SRX466209 SRR1163272 16331809 16331809 1 FALSE FALSE 9868361 335169356 NA NA 2014-02-06T11:30:57.927 2016-01-25T01:11:19.007 2016-01-25T01:14:24.897 36 GSM1322961 SRR1163272.bw STT5522_EWS c("tissue: soft tissue sarcoma", "tissue subtype: EWS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553973 SRX466210 SRR1163273 17811206 17811206 1 FALSE FALSE 12198689 426666809 NA NA 2014-02-06T11:30:30.000 2016-01-25T01:11:19.783 2016-01-25T01:14:24.677 36 GSM1322962 SRR1163273.bw STT5523_EWS c("tissue: soft tissue sarcoma", "tissue subtype: EWS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553974 SRX466211 SRR1163274 24146719 24146719 1 FALSE FALSE 16923833 559392712 NA NA 2014-02-06T11:30:37.947 2016-01-25T01:11:20.777 2016-01-25T01:14:24.457 36 GSM1322963 SRR1163274.bw STT5598_EWS c("tissue: soft tissue sarcoma", "tissue subtype: EWS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553975 SRX466212 SRR1163275 20116142 20116142 1 FALSE FALSE 15762087 522479819 NA NA 2014-02-06T11:30:35.040 2016-01-25T01:11:21.703 2016-01-25T01:14:24.243 36 GSM1322964 SRR1163275.bw STT5600_EWS c("tissue: soft tissue sarcoma", "tissue subtype: EWS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553976 SRX466213 SRR1163276 19903831 19903831 1 FALSE FALSE 12110648 389938519 NA NA 2014-02-06T11:30:32.470 2016-01-25T01:11:22.627 2016-01-25T01:14:23.983 36 GSM1322965 SRR1163276.bw STT6078_TGCT c("tissue: soft tissue sarcoma", "tissue subtype: TGCT", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553977 SRX466214 SRR1163277 16004215 16004215 1 FALSE FALSE 8156057 255385908 NA NA 2014-02-06T11:30:42.887 2016-01-25T01:11:46.140 2016-01-25T01:14:23.720 36 GSM1322966 SRR1163277.bw STT6079_TGCT c("tissue: soft tissue sarcoma", "tissue subtype: TGCT", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553978 SRX466215 SRR1163278 20986992 20986992 1 FALSE FALSE 13825954 455426508 NA NA 2014-02-06T11:31:02.343 2016-01-25T01:11:47.083 2016-01-25T01:14:23.483 36 GSM1322967 SRR1163278.bw STT6080_TGCT c("tissue: soft tissue sarcoma", "tissue subtype: TGCT", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553979 SRX466216 SRR1163279 30231723 30231723 1 FALSE FALSE 24530511 836492787 NA NA 2014-02-06T11:30:40.423 2016-01-25T01:11:47.897 2016-01-25T01:14:23.247 36 GSM1322968 SRR1163279.bw STT6074_PVNS c("tissue: soft tissue sarcoma", "tissue subtype: PVNS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553980 SRX466217 SRR1163280 26007788 26007788 1 FALSE FALSE 20763968 712955867 NA NA 2014-02-06T11:30:50.223 2016-01-25T01:11:48.730 2016-01-25T01:14:22.990 36 GSM1322969 SRR1163280.bw STT6075_PVNS c("tissue: soft tissue sarcoma", "tissue subtype: PVNS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553981 SRX466218 SRR1163281 26315936 26315936 1 FALSE FALSE 20557372 702380284 NA NA 2014-02-06T11:30:47.757 2016-01-25T01:11:49.687 2016-01-25T01:14:21.730 36 GSM1322970 SRR1163281.bw STT6076_PVNS c("tissue: soft tissue sarcoma", "tissue subtype: PVNS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553982 SRX466219 SRR1163282 15696081 15696081 1 FALSE FALSE 9544883 313343032 NA NA 2014-02-06T11:30:45.247 2016-01-25T01:11:50.513 2016-01-25T01:14:19.333 36 GSM1322971 SRR1163282.bw STT3705_SS c("tissue: soft tissue sarcoma", "tissue subtype: SS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553983 SRX466220 SRR1163283 13831588 13831588 1 FALSE FALSE 9698065 330477363 NA NA 2014-02-06T11:31:03.983 2016-01-25T01:11:51.433 2016-01-25T01:14:19.100 36 GSM1322972 SRR1163283.bw STT5532_SS c("tissue: soft tissue sarcoma", "tissue subtype: SS", "tissue archive method: FFPE", "source: Stanford Surgical") SRP036821 SRS553984 SRX466221 SRR1163284 13892060 13892060 1 FALSE FALSE 7845376 256155743 NA NA 2014-02-06T11:30:59.200 2016-01-25T01:11:52.250 2016-01-25T01:14:18.817 36 GSM1322973 SRR1163284.bw STT5533_SS c("tissue: soft tissue sarcoma", "tissue subtype: SS", "tissue archive method: FFPE", "source: Stanford Surgical")