project	sample	experiment	run	read_count_as_reported_by_sra	reads_downloaded	proportion_of_reads_reported_by_sra_downloaded	paired_end	sra_misreported_paired_end	mapped_read_count	auc	sharq_beta_tissue	sharq_beta_cell_type	biosample_submission_date	biosample_publication_date	biosample_update_date	avg_read_length	geo_accession	bigwig_file	title	characteristics
SRP036848	SRS554935	SRX467270	SRR1164830	35460624	33845445	0.95445147835	TRUE	FALSE	33759672	1718255468	prostate	esc	2014-02-07T07:54:29.850	2014-04-12T01:15:05.097	2014-04-12T01:28:26.033	97	GSM1323690	SRR1164830.bw	Prostate_VA-PC-99-77	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0077", "external id: VA-PC-99-77", "tissue: prostate", "months to bcr: NA", "months total f/u: 51.5", "bcr: 0", "prepsa: 5.55", "race: B", "pstage: pT2A", "gleason score: 336", "tgleason: 6", "sms: Negative", "no of uniquely mapped reads: 32,490,259", "no. of total reads: 43,257,880", "% mapped: 75.1%")
SRP036848	SRS554914	SRX467249	SRR1164809	55573146	52967000	0.953104220517	TRUE	FALSE	52807836	2687275547	prostate	esc	2014-02-07T07:56:11.870	2014-04-12T01:15:01.710	2014-04-12T01:28:19.303	97	GSM1323669	SRR1164809.bw	Prostate_VA-PC-91-64	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0064", "external id: VA-PC-91-64", "tissue: prostate", "months to bcr: NA", "months total f/u: 48.6", "bcr: 0", "prepsa: 4.9", "race: W", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 50,897,494", "no. of total reads: 63,710,732", "% mapped: 79.9%")
SRP036848	SRS554977	SRX467312	SRR1164872	110146296	104778370	0.951265487856	TRUE	FALSE	104444128	5315002130	prostate	esc	2014-02-07T07:53:28.807	2014-04-12T01:08:21.613	2014-04-12T01:28:40.353	97	GSM1323732	SRR1164872.bw	Prostate_VA-PC-00-86	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0086", "external id: VA-PC-00-86", "tissue: prostate", "months to bcr: 26.6", "months total f/u: 26.6", "bcr: 1", "prepsa: 4.9", "race: B", "pstage: pT3B", "gleason score: 437", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 100,294,010", "no. of total reads: 129,843,158", "% mapped: 77.2%")
SRP036848	SRS554940	SRX467275	SRR1164835	76598184	72586275	0.947623967169	TRUE	FALSE	72440249	3615728499	prostate	esc	2014-02-07T07:54:32.213	2014-04-12T01:15:34.133	2014-04-12T01:28:27.800	94	GSM1323695	SRR1164835.bw	Prostate_VA-PC-99-82	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0082", "external id: VA-PC-99-82", "tissue: prostate", "months to bcr: NA", "months total f/u: 34.7", "bcr: 0", "prepsa: 5.22", "race: W", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: unknown", "no of uniquely mapped reads: 65,045,734", "no. of total reads: 118,237,400", "% mapped: 55.0%")
SRP036848	SRS554919	SRX467254	SRR1164814	24025456	22748382	0.946844963109	TRUE	FALSE	22665582	1153075802	prostate	esc	2014-02-07T07:57:11.343	2014-04-12T01:13:14.710	2014-04-12T01:28:20.900	96	GSM1323674	SRR1164814.bw	Prostate_VA-PC-93-19	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0019", "external id: VA-PC-93-19", "tissue: prostate", "months to bcr: NA", "months total f/u: 155.1", "bcr: 0", "prepsa: 17", "race: W", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: unknown", "no of uniquely mapped reads: 21,723,177", "no. of total reads: 27,119,760", "% mapped: 80.1%")
SRP036848	SRS554988	SRX467323	SRR1164883	66191168	62560931	0.945155266032	TRUE	FALSE	62386746	3176013772	prostate	esc	2014-02-07T07:51:46.173	2014-04-12T01:12:25.770	2014-04-12T01:28:44.117	96	GSM1323743	SRR1164883.bw	Prostate_VA-PC-94-71	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0071", "external id: VA-PC-94-71", "tissue: prostate", "months to bcr: 1.6", "months total f/u: 1.6", "bcr: 1", "prepsa: 14.8", "race: W", "pstage: pT2C", "gleason score: 448", "tgleason: 8", "sms: Positive", "no of uniquely mapped reads: 59,808,026", "no. of total reads: 80,420,126", "% mapped: 74.4%")
SRP036848	SRS554937	SRX467272	SRR1164832	36858192	34594278	0.938577725136	TRUE	FALSE	34511743	1757021800	prostate	esc	2014-02-07T07:54:23.257	2014-04-12T01:15:30.790	2014-04-12T01:28:26.707	95	GSM1323692	SRR1164832.bw	Prostate_VA-PC-99-79	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0079", "external id: VA-PC-99-79", "tissue: prostate", "months to bcr: NA", "months total f/u: 76.8", "bcr: 0", "prepsa: 5.72", "race: W", "pstage: pT2B", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 31,069,486", "no. of total reads: 39,654,268", "% mapped: 78.4%")
SRP036848	SRS554933	SRX467268	SRR1164828	102370112	95929500	0.937085035132	TRUE	FALSE	95535911	4767104662	prostate	esc	2014-02-07T07:54:37.317	2014-04-12T01:14:43.240	2014-04-12T01:28:25.390	93	GSM1323688	SRR1164828.bw	Prostate_VA-PC-99-75	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0075", "external id: VA-PC-99-75", "tissue: prostate", "months to bcr: NA", "months total f/u: 64.3", "bcr: 0", "prepsa: 8.69", "race: W", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 91,549,024", "no. of total reads: 187,807,960", "% mapped: 48.7%")
SRP036848	SRS554941	SRX467276	SRR1164836	58562234	54835632	0.936365098367	TRUE	FALSE	54644192	2781487214	prostate	esc	2014-02-07T07:54:39.850	2014-04-12T01:15:27.077	2014-04-12T01:28:28.103	95	GSM1323696	SRR1164836.bw	Prostate_VA-PC-99-83	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0083", "external id: VA-PC-99-83", "tissue: prostate", "months to bcr: NA", "months total f/u: 77.3", "bcr: 0", "prepsa: 10.63", "race: B", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 52,536,474", "no. of total reads: 83,965,414", "% mapped: 62.6%")
SRP036848	SRS554984	SRX467319	SRR1164879	41519002	38840626	0.935490356921	TRUE	FALSE	38688351	1968951172	prostate	esc	2014-02-07T07:53:49.790	2014-04-12T01:12:16.560	2014-04-12T01:28:42.597	95	GSM1323739	SRR1164879.bw	Prostate_VA-PC-92-9	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0009", "external id: VA-PC-92-9", "tissue: prostate", "months to bcr: 3.6", "months total f/u: 3.6", "bcr: 1", "prepsa: 40.5", "race: W", "pstage: pT3B", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 37,147,471", "no. of total reads: 78,025,110", "% mapped: 47.6%")
SRP036848	SRS554936	SRX467271	SRR1164831	72320558	67573462	0.934360351589	TRUE	FALSE	67314834	3358530670	prostate	esc	2014-02-07T07:54:59.030	2014-04-12T01:14:52.997	2014-04-12T01:28:26.370	93	GSM1323691	SRR1164831.bw	Prostate_VA-PC-99-78	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0078", "external id: VA-PC-99-78", "tissue: prostate", "months to bcr: NA", "months total f/u: 71.9", "bcr: 0", "prepsa: 5.27", "race: B", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 64,869,418", "no. of total reads: 86,112,328", "% mapped: 75.3%")
SRP036848	SRS554918	SRX467253	SRR1164813	47802486	44630335	0.93364045962	TRUE	FALSE	44488779	2220079623	prostate	esc	2014-02-07T07:56:14.150	2014-04-12T01:12:46.633	2014-04-12T01:28:20.543	93	GSM1323673	SRR1164813.bw	Prostate_VA-PC-92-67	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0067", "external id: VA-PC-92-67", "tissue: prostate", "months to bcr: NA", "months total f/u: 116.9", "bcr: 0", "prepsa: 6.6", "race: W", "pstage: pT2", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 42,716,254", "no. of total reads: 71,046,612", "% mapped: 60.1%")
SRP036848	SRS554909	SRX467244	SRR1164804	67234050	62755262	0.933385122568	TRUE	FALSE	62547015	3121656806	prostate	esc	2014-02-07T07:55:51.667	2014-04-12T01:14:36.780	2014-04-12T01:28:17.683	93	GSM1323664	SRR1164804.bw	Prostate_VA-PC-00-95	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0095", "external id: VA-PC-00-95", "tissue: prostate", "months to bcr: NA", "months total f/u: 67.9", "bcr: 0", "prepsa: 4.42", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 59,522,602", "no. of total reads: 90,030,558", "% mapped: 66.1%")
SRP036848	SRS554939	SRX467274	SRR1164834	36742000	34089449	0.927806025802	TRUE	FALSE	33923818	1691690981	prostate	esc	2014-02-07T07:54:54.207	2014-04-12T01:15:14.663	2014-04-12T01:28:27.513	92	GSM1323694	SRR1164834.bw	Prostate_VA-PC-99-81	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0081", "external id: VA-PC-99-81", "tissue: prostate", "months to bcr: NA", "months total f/u: 55.6", "bcr: 0", "prepsa: 8.77", "race: W", "pstage: pT2", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 32,471,983", "no. of total reads: 45,905,090", "% mapped: 70.7%")
SRP036848	SRS554997	SRX467332	SRR1164892	109463010	101486168	0.927127510928	TRUE	FALSE	101056758	5043254139	prostate	esc	2014-02-07T07:52:00.533	2014-04-12T01:06:59.327	2014-04-12T01:28:46.983	92	GSM1323752	SRR1164892.bw	Prostate_VA-PC-99-85	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0085", "external id: VA-PC-99-85", "tissue: prostate", "months to bcr: 39.9", "months total f/u: 39.9", "bcr: 1", "prepsa: 4.96", "race: W", "pstage: pT3A", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 96,977,746", "no. of total reads: 119,105,608", "% mapped: 81.4%")
SRP036848	SRS554990	SRX467325	SRR1164885	56853288	52435962	0.92230306891	TRUE	FALSE	52198240	2657102985	prostate	esc	2014-02-07T07:51:55.740	2014-04-12T01:12:30.223	2014-04-12T01:28:44.747	94	GSM1323745	SRR1164885.bw	Prostate_VA-PC-95-37	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0037", "external id: VA-PC-95-37", "tissue: prostate", "months to bcr: 60.5", "months total f/u: 60.5", "bcr: 1", "prepsa: 5.6", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 50,090,466", "no. of total reads: 80,399,890", "% mapped: 62.3%")
SRP036848	SRS554931	SRX467266	SRR1164826	57493808	52884979	0.919837819753	TRUE	FALSE	52601731	2624712831	prostate	esc	2014-02-07T07:54:20.893	2014-04-12T01:13:29.700	2014-04-12T01:28:24.757	91	GSM1323686	SRR1164826.bw	Prostate_VA-PC-99-54	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0054", "external id: VA-PC-99-54", "tissue: prostate", "months to bcr: NA", "months total f/u: 70.4", "bcr: 0", "prepsa: 4.85", "race: W", "pstage: pT2A", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 49,857,683", "no. of total reads: 71,463,718", "% mapped: 69.8%")
SRP036848	SRS554965	SRX467300	SRR1164860	29103910	26767141	0.919709447975	TRUE	FALSE	26638366	1355050427	prostate	esc	2014-02-07T07:53:02.630	2014-04-12T01:17:56.307	2014-04-12T01:28:36.217	93	GSM1323720	SRR1164860.bw	Prostate_UTPC110	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0018.1", "external id: UTPC110", "tissue: prostate", "months to bcr: 43.4", "months total f/u: 75", "bcr: 1", "prepsa: 19.9", "race: NA", "pstage: pT2B", "gleason score: 549", "tgleason: 9", "sms: Positive", "no of uniquely mapped reads: 25,416,364", "no. of total reads: 37,816,666", "% mapped: 67.2%")
SRP036848	SRS554985	SRX467320	SRR1164880	86128134	78933745	0.916468769659	TRUE	FALSE	78529571	3918100929	prostate	esc	2014-02-07T07:51:33.910	2014-04-12T01:12:13.433	2014-04-12T01:28:42.920	91	GSM1323740	SRR1164880.bw	Prostate_VA-PC-93-20	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0020", "external id: VA-PC-93-20", "tissue: prostate", "months to bcr: 1.0", "months total f/u: 1.0", "bcr: 1", "prepsa: 12.8", "race: W", "pstage: pT2C", "gleason score: 448", "tgleason: 8", "sms: Positive", "no of uniquely mapped reads: 74,903,758", "no. of total reads: 99,607,176", "% mapped: 75.2%")
SRP036848	SRS554907	SRX467242	SRR1164802	110179508	100887009	0.91566036944	TRUE	FALSE	100310325	5005169317	prostate	esc	2014-02-07T07:55:54.563	2014-04-12T01:14:20.303	2014-04-12T01:28:17.100	91	GSM1323662	SRR1164802.bw	Prostate_VA-PC-00-93	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0093", "external id: VA-PC-00-93", "tissue: prostate", "months to bcr: NA", "months total f/u: 50.4", "bcr: 0", "prepsa: 4.54", "race: W", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 95,708,411", "no. of total reads: 119,594,960", "% mapped: 80.0%")
SRP036848	SRS554979	SRX467315	SRR1164875	78044480	71428801	0.915231942093	TRUE	FALSE	71055445	3616297387	prostate	esc	2014-02-07T07:51:38.943	2014-04-12T01:08:28.367	2014-04-12T01:28:40.957	93	GSM1323735	SRR1164875.bw	Prostate_VA-PC-00-99	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0099", "external id: VA-PC-00-99", "tissue: prostate", "months to bcr: 26.6", "months total f/u: 26.6", "bcr: 1", "prepsa: 18.03", "race: B", "pstage: pT3A", "gleason score: 437", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 67,659,170", "no. of total reads: 90,703,994", "% mapped: 74.6%")
SRP036848	SRS554903	SRX467238	SRR1164798	67556940	61806380	0.914878323382	TRUE	FALSE	61485662	3129149116	prostate	esc	2014-02-07T07:55:44.833	2014-04-12T01:14:02.207	2014-04-12T01:28:15.643	93	GSM1323658	SRR1164798.bw	Prostate_VA-PC-00-87	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0087", "external id: VA-PC-00-87", "tissue: prostate", "months to bcr: NA", "months total f/u: 69.5", "bcr: 0", "prepsa: 6.25", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 58,978,596", "no. of total reads: 80,944,386", "% mapped: 72.9%")
SRP036848	SRS554920	SRX467255	SRR1164815	57744670	52624792	0.911335920701	TRUE	FALSE	52293338	2608494643	prostate	esc	2014-02-07T07:53:33.863	2014-04-12T01:12:55.273	2014-04-12T01:28:21.290	91	GSM1323675	SRR1164815.bw	Prostate_VA-PC-93-68	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0068", "external id: VA-PC-93-68", "tissue: prostate", "months to bcr: NA", "months total f/u: 31.8", "bcr: 0", "prepsa: 14.96", "race: W", "pstage: pT2C", "gleason score: 437", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 50,028,024", "no. of total reads: 70,901,434", "% mapped: 70.6%")
SRP036848	SRS554982	SRX467317	SRR1164877	73294376	66377762	0.905632404866	TRUE	FALSE	65956469	3287912883	prostate	esc	2014-02-07T07:53:31.200	2014-04-12T01:12:01.183	2014-04-12T01:28:41.930	90	GSM1323737	SRR1164877.bw	Prostate_VA-PC-91-65	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0065", "external id: VA-PC-91-65", "tissue: prostate", "months to bcr: 0.7", "months total f/u: 0.7", "bcr: 1", "prepsa: 72.6", "race: B", "pstage: pT3B", "gleason score: 459", "tgleason: 9", "sms: Negative", "no of uniquely mapped reads: 62,526,982", "no. of total reads: 86,029,578", "% mapped: 72.7%")
SRP036848	SRS554911	SRX467246	SRR1164806	35293184	31913555	0.904241311864	TRUE	FALSE	31714320	1582318494	prostate	esc	2014-02-07T07:56:04.557	2014-04-12T01:14:58.440	2014-04-12T01:28:18.360	90	GSM1323666	SRR1164806.bw	Prostate_VA-PC-00-98	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0098", "external id: VA-PC-00-98", "tissue: prostate", "months to bcr: NA", "months total f/u: 63.6", "bcr: 0", "prepsa: 8.19", "race: W", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 30,149,534", "no. of total reads: 41,886,224", "% mapped: 72.0%")
SRP036848	SRS554924	SRX467259	SRR1164819	18885308	17066892	0.903712663834	TRUE	FALSE	16967378	863556159	prostate	esc	2014-02-07T07:54:05.300	2014-04-12T01:12:58.003	2014-04-12T01:28:22.510	92	GSM1323679	SRR1164819.bw	Prostate_VA-PC-97-47	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0047", "external id: VA-PC-97-47", "tissue: prostate", "months to bcr: NA", "months total f/u: 95.9", "bcr: 0", "prepsa: 5.31", "race: W", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 16,010,891", "no. of total reads: 81,869,344", "% mapped: 19.6%")
SRP036848	SRS554898	SRX467234	SRR1164794	115840622	104613061	0.903077514553	TRUE	FALSE	103706631	5171993229	prostate	esc	2014-02-07T07:55:39.367	2014-04-12T01:14:13.317	2014-04-12T01:28:14.090	90	GSM1323654	SRR1164794.bw	Prostate_UTPC008	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC008", "external id: UTPC008", "tissue: prostate", "months to bcr: NA", "months total f/u: 72", "bcr: 0", "prepsa: 8", "race: NA", "pstage: pT1C", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 101,038,395", "no. of total reads: 146,440,614", "% mapped: 69.0%")
SRP036848	SRS554910	SRX467245	SRR1164805	95154004	85929694	0.903059150301	TRUE	FALSE	85353216	4258141670	prostate	esc	2014-02-07T07:55:57.040	2014-04-12T01:14:16.667	2014-04-12T01:28:18.017	90	GSM1323665	SRR1164805.bw	Prostate_VA-PC-00-97	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0097", "external id: VA-PC-00-97", "tissue: prostate", "months to bcr: NA", "months total f/u: 64.2", "bcr: 0", "prepsa: 4.74", "race: W", "pstage: pT2C", "gleason score: 336", "tgleason: 6", "sms: Negative", "no of uniquely mapped reads: 81,114,085", "no. of total reads: 105,378,444", "% mapped: 77.0%")
SRP036848	SRS554987	SRX467322	SRR1164882	40079834	36164579	0.902313592417	TRUE	FALSE	35974767	1830493489	prostate	esc	2014-02-07T07:51:36.550	2014-04-12T01:12:18.503	2014-04-12T01:28:43.557	92	GSM1323742	SRR1164882.bw	Prostate_VA-PC-93-24	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0024", "external id: VA-PC-93-24", "tissue: prostate", "months to bcr: 18.3", "months total f/u: 18.3", "bcr: 1", "prepsa: 20.2", "race: W", "pstage: pT2", "gleason score: 437", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 34,139,269", "no. of total reads: 76,165,456", "% mapped: 44.8%")
SRP036848	SRS554969	SRX467304	SRR1164864	21482324	19342982	0.900413847217	TRUE	FALSE	19203007	976894414	prostate	esc	2014-02-07T07:52:57.273	2014-04-12T01:18:22.230	2014-04-12T01:28:37.490	91	GSM1323724	SRR1164864.bw	Prostate_UTPC131	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0022.1", "external id: UTPC131", "tissue: prostate", "months to bcr: 0.0", "months total f/u: 100", "bcr: 1", "prepsa: 25", "race: NA", "pstage: pT3B", "gleason score: 437", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 18,275,411", "no. of total reads: 28,393,284", "% mapped: 64.4%")
SRP036848	SRS554908	SRX467243	SRR1164803	58922804	52855918	0.897036705857	TRUE	FALSE	52516752	2672500976	prostate	esc	2014-02-07T07:56:01.913	2014-04-12T01:14:49.380	2014-04-12T01:28:17.380	91	GSM1323663	SRR1164803.bw	Prostate_VA-PC-00-94	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0094", "external id: VA-PC-00-94", "tissue: prostate", "months to bcr: NA", "months total f/u: 61.5", "bcr: 0", "prepsa: 7.14", "race: B", "pstage: pT3A", "gleason score: 347", "tgleason: 7", "sms: unknown", "no of uniquely mapped reads: 49,844,364", "no. of total reads: 72,127,946", "% mapped: 69.1%")
SRP036848	SRS554923	SRX467258	SRR1164818	46960864	42082632	0.89612133201	TRUE	FALSE	41797737	2085316676	prostate	esc	2014-02-07T07:54:02.527	2014-04-12T01:13:19.960	2014-04-12T01:28:22.223	89	GSM1323678	SRR1164818.bw	Prostate_VA-PC-96-45	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0045", "external id: VA-PC-96-45", "tissue: prostate", "months to bcr: NA", "months total f/u: 100.2", "bcr: 0", "prepsa: 3.8", "race: W", "pstage: pT3A", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 39,787,464", "no. of total reads: 62,116,178", "% mapped: 64.1%")
SRP036848	SRS554901	SRX467236	SRR1164796	71635328	64186759	0.89602101075	TRUE	FALSE	63176657	3148081880	prostate	esc	2014-02-07T07:55:33.470	2014-04-12T01:14:05.710	2014-04-12T01:28:14.990	89	GSM1323656	SRR1164796.bw	Prostate_UTPC107	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC107", "external id: UTPC107", "tissue: prostate", "months to bcr: NA", "months total f/u: 63", "bcr: 0", "prepsa: 5.25", "race: NA", "pstage: pT1C", "gleason score: 336", "tgleason: 6", "sms: Positive", "no of uniquely mapped reads: 60,698,177", "no. of total reads: 96,754,580", "% mapped: 62.7%")
SRP036848	SRS554906	SRX467241	SRR1164801	63466746	56866518	0.896004940918	TRUE	FALSE	56487381	2874828271	prostate	esc	2014-02-07T07:55:49.650	2014-04-12T01:14:30.090	2014-04-12T01:28:16.817	91	GSM1323661	SRR1164801.bw	Prostate_VA-PC-00-92	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0092", "external id: VA-PC-00-92", "tissue: prostate", "months to bcr: NA", "months total f/u: 59.5", "bcr: 0", "prepsa: 13.92", "race: B", "pstage: pT3A", "gleason score: 538", "tgleason: 8", "sms: Positive", "no of uniquely mapped reads: 53,860,194", "no. of total reads: 76,364,672", "% mapped: 70.5%")
SRP036848	SRS554992	SRX467327	SRR1164887	28625602	25617167	0.894904044289	TRUE	FALSE	25433058	1268819692	prostate	esc	2014-02-07T07:51:41.393	2014-04-12T01:06:54.973	2014-04-12T01:28:45.370	89	GSM1323747	SRR1164887.bw	Prostate_VA-PC-95-42	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0042", "external id: VA-PC-95-42", "tissue: prostate", "months to bcr: 11.8", "months total f/u: 11.8", "bcr: 1", "prepsa: 14.5", "race: W", "pstage: pT4", "gleason score: 347", "tgleason: 7", "sms: unknown", "no of uniquely mapped reads: 23,750,742", "no. of total reads: 46,548,402", "% mapped: 51.0%")
SRP036848	SRS554970	SRX467305	SRR1164865	36961386	33028349	0.893590651606	TRUE	FALSE	32816048	2710191633	prostate	esc	2014-02-07T07:53:16.363	2014-04-12T01:18:28.900	2014-04-12T01:28:37.810	147	GSM1323725	SRR1164865.bw	Prostate_UTPC132	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0023.1", "external id: UTPC132", "tissue: prostate", "months to bcr: 27.6", "months total f/u: 101", "bcr: 1", "prepsa: 13", "race: NA", "pstage: pT2A", "gleason score: 437", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 31,782,258", "no. of total reads: 66,452,532", "% mapped: 47.8%")
SRP036848	SRS554905	SRX467240	SRR1164800	34925830	30961967	0.886506261984	TRUE	FALSE	30746597	1533991113	prostate	esc	2014-02-07T07:55:59.423	2014-04-12T01:14:26.123	2014-04-12T01:28:16.497	88	GSM1323660	SRR1164800.bw	Prostate_VA-PC-00-91	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0091", "external id: VA-PC-00-91", "tissue: prostate", "months to bcr: NA", "months total f/u: 62.4", "bcr: 0", "prepsa: 5.72", "race: W", "pstage: pT2C", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 29,052,523", "no. of total reads: 43,731,408", "% mapped: 66.4%")
SRP036848	SRS554915	SRX467250	SRR1164810	11036260	9767771	0.885061696625	TRUE	FALSE	9681305	526937801	prostate	esc	2014-02-07T07:56:16.360	2014-04-12T01:14:40.120	2014-04-12T01:28:19.617	96	GSM1323670	SRR1164810.bw	Prostate_VA-PC-92-13	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0013", "external id: VA-PC-92-13", "tissue: prostate", "months to bcr: NA", "months total f/u: 160.3", "bcr: 0", "prepsa: 3.9", "race: W", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 9,199,337", "no. of total reads: 13,443,226", "% mapped: 68.4%")
SRP036848	SRS554972	SRX467307	SRR1164867	40527182	35818079	0.883803838125	TRUE	FALSE	35564740	2887892750	prostate	esc	2014-02-07T07:52:52.720	2014-04-12T01:08:01.090	2014-04-12T01:28:38.463	143	GSM1323727	SRR1164867.bw	Prostate_UTPC146	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0026.1", "external id: UTPC146", "tissue: prostate", "months to bcr: 0.0", "months total f/u: 112", "bcr: 1", "prepsa: 9.7", "race: W", "pstage: pT3B", "gleason score: 448", "tgleason: 8", "sms: Positive", "no of uniquely mapped reads: 34,232,839", "no. of total reads: 68,748,780", "% mapped: 49.8%")
SRP036848	SRS554922	SRX467257	SRR1164817	79577350	70288565	0.883273506846	TRUE	FALSE	69752178	3480205438	prostate	esc	2014-02-07T07:56:18.780	2014-04-12T01:13:04.730	2014-04-12T01:28:21.907	88	GSM1323677	SRR1164817.bw	Prostate_VA-PC-94-70	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0070", "external id: VA-PC-94-70", "tissue: prostate", "months to bcr: NA", "months total f/u: 106.6", "bcr: 0", "prepsa: 2.4", "race: B", "pstage: pT3A", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 66,648,540", "no. of total reads: 91,910,734", "% mapped: 72.5%")
SRP036848	SRS554967	SRX467302	SRR1164862	25752304	22660998	0.879960022218	TRUE	FALSE	22533458	1145957717	prostate	esc	2014-02-07T07:52:50.343	2014-04-12T01:18:25.523	2014-04-12T01:28:36.853	89	GSM1323722	SRR1164862.bw	Prostate_UTPC116	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0020.1", "external id: UTPC116", "tissue: prostate", "months to bcr: 48.5", "months total f/u: 49", "bcr: 1", "prepsa: 27", "race: NA", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 20,810,790", "no. of total reads: 30,127,252", "% mapped: 69.1%")
SRP036848	SRS554927	SRX467262	SRR1164822	51346286	45181288	0.879932932248	TRUE	FALSE	44851341	2282794239	prostate	esc	2014-02-07T07:54:15.573	2014-04-12T01:13:01.240	2014-04-12T01:28:23.450	89	GSM1323682	SRR1164822.bw	Prostate_VA-PC-97-50	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0050", "external id: VA-PC-97-50", "tissue: prostate", "months to bcr: NA", "months total f/u: 83.0", "bcr: 0", "prepsa: 8", "race: W", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 42,286,269", "no. of total reads: 88,543,368", "% mapped: 47.8%")
SRP036848	SRS554942	SRX467277	SRR1164837	29209872	25666804	0.878703063129	TRUE	FALSE	25471208	2012347746	prostate	esc	2014-02-07T07:54:51.830	2014-04-12T01:16:57.720	2014-04-12T01:28:28.457	138	GSM1323697	SRR1164837.bw	Prostate_VA-PC-99-84	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0084", "external id: VA-PC-99-84", "tissue: prostate", "months to bcr: NA", "months total f/u: 63.4", "bcr: 0", "prepsa: 4.92", "race: W", "pstage: pT2A", "gleason score: 336", "tgleason: 6", "sms: Negative", "no of uniquely mapped reads: 24,586,944", "no. of total reads: 41,567,752", "% mapped: 59.1%")
SRP036848	SRS554900	SRX467235	SRR1164795	59426846	52033955	0.875596779947	TRUE	FALSE	50582676	2519732200	prostate	esc	2014-02-07T07:55:28.307	2014-04-12T01:13:59.097	2014-04-12T01:28:14.680	87	GSM1323655	SRR1164795.bw	Prostate_UTPC020	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC020", "external id: UTPC020", "tissue: prostate", "months to bcr: NA", "months total f/u: 85", "bcr: 0", "prepsa: 29.73", "race: NA", "pstage: pT2B", "gleason score: 448", "tgleason: 8", "sms: Negative", "no of uniquely mapped reads: 48,519,295", "no. of total reads: 85,311,334", "% mapped: 56.9%")
SRP036848	SRS554904	SRX467239	SRR1164799	31971320	27970093	0.874849490106	TRUE	FALSE	27737232	1383468380	prostate	esc	2014-02-07T07:55:47.163	2014-04-12T01:14:09.097	2014-04-12T01:28:16.213	87	GSM1323659	SRR1164799.bw	Prostate_VA-PC-00-90	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0090", "external id: VA-PC-00-90", "tissue: prostate", "months to bcr: NA", "months total f/u: 68.0", "bcr: 0", "prepsa: 1.83", "race: B", "pstage: pT2", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 26,387,543", "no. of total reads: 56,712,230", "% mapped: 46.5%")
SRP036848	SRS554989	SRX467324	SRR1164884	37990912	33138215	0.872266898989	TRUE	FALSE	32933340	1676485246	prostate	esc	2014-02-07T07:51:43.750	2014-04-12T01:12:27.730	2014-04-12T01:28:44.427	88	GSM1323744	SRR1164884.bw	Prostate_VA-PC-95-34	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0034", "external id: VA-PC-95-34", "tissue: prostate", "months to bcr: 3.5", "months total f/u: 3.5", "bcr: 1", "prepsa: 17.2", "race: W", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 30,409,790", "no. of total reads: 62,706,238", "% mapped: 48.5%")
SRP036848	SRS554921	SRX467256	SRR1164816	99693908	86889263	0.87156040668	TRUE	FALSE	86051738	4292211333	prostate	esc	2014-02-07T07:54:00.000	2014-04-12T01:12:52.737	2014-04-12T01:28:21.617	87	GSM1323676	SRR1164816.bw	Prostate_VA-PC-94-28	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0028", "external id: VA-PC-94-28", "tissue: prostate", "months to bcr: NA", "months total f/u: 118.3", "bcr: 0", "prepsa: 15.9", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 82,057,308", "no. of total reads: 117,376,166", "% mapped: 69.9%")
SRP036848	SRS554975	SRX467310	SRR1164870	152989792	132978530	0.869198710983	TRUE	FALSE	130235586	6490097383	prostate	esc	2014-02-07T07:53:07.750	2014-04-12T01:08:07.240	2014-04-12T01:28:39.650	86	GSM1323730	SRR1164870.bw	Prostate_UTPC164	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC164", "external id: UTPC164", "tissue: prostate", "months to bcr: 0", "months total f/u: 72", "bcr: 1", "prepsa: 15.84", "race: NA", "pstage: pT2A", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 123,211,885", "no. of total reads: 201,380,054", "% mapped: 61.2%")
SRP036848	SRS554991	SRX467326	SRR1164886	61555392	53483695	0.86887099996	TRUE	FALSE	53107610	2702353635	prostate	esc	2014-02-07T07:51:48.460	2014-04-12T01:12:32.760	2014-04-12T01:28:45.047	88	GSM1323746	SRR1164886.bw	Prostate_VA-PC-95-41	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0041", "external id: VA-PC-95-41", "tissue: prostate", "months to bcr: 101.1", "months total f/u: 101.1", "bcr: 1", "prepsa: 6.5", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 48,679,745", "no. of total reads: 86,453,316", "% mapped: 56.3%")
SRP036848	SRS554928	SRX467263	SRR1164823	26786270	23225000	0.867048678297	TRUE	FALSE	23048880	1172698817	prostate	esc	2014-02-07T07:54:10.050	2014-04-12T01:13:27.670	2014-04-12T01:28:23.830	88	GSM1323683	SRR1164823.bw	Prostate_VA-PC-97-51	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0051", "external id: VA-PC-97-51", "tissue: prostate", "months to bcr: NA", "months total f/u: 89.3", "bcr: 0", "prepsa: 7.1", "race: B", "pstage: pT2B", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 21,954,686", "no. of total reads: 74,819,768", "% mapped: 29.3%")
SRP036848	SRS554960	SRX467295	SRR1164855	31805142	27557151	0.866436974248	TRUE	FALSE	27344285	1391649166	prostate	esc	2014-02-07T07:52:40.760	2014-04-12T01:18:03.153	2014-04-12T01:28:34.510	88	GSM1323715	SRR1164855.bw	Prostate_UTPC088	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0012.1", "external id: UTPC088", "tissue: prostate", "months to bcr: 21.4", "months total f/u: 116", "bcr: 1", "prepsa: 7.3", "race: NA", "pstage: pT1C", "gleason score: 336", "tgleason: 6", "sms: Negative", "no of uniquely mapped reads: 25,814,843", "no. of total reads: 42,437,224", "% mapped: 60.8%")
SRP036848	SRS554925	SRX467260	SRR1164820	48108966	41676879	0.866301699355	TRUE	FALSE	41398652	2108360990	prostate	esc	2014-02-07T07:54:07.630	2014-04-12T01:13:22.153	2014-04-12T01:28:22.820	88	GSM1323680	SRR1164820.bw	Prostate_VA-PC-97-48	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0048", "external id: VA-PC-97-48", "tissue: prostate", "months to bcr: NA", "months total f/u: 96.6", "bcr: 0", "prepsa: 7.57", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 39,114,735", "no. of total reads: 65,304,766", "% mapped: 59.9%")
SRP036848	SRS554912	SRX467247	SRR1164807	48499424	41725109	0.860321743203	TRUE	FALSE	41308272	2101963145	prostate	esc	2014-02-07T07:56:06.943	2014-04-12T01:14:46.073	2014-04-12T01:28:18.663	87	GSM1323667	SRR1164807.bw	Prostate_VA-PC-91-61	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0061", "external id: VA-PC-91-61", "tissue: prostate", "months to bcr: NA", "months total f/u: 2.3", "bcr: 0", "prepsa: 3.7", "race: W", "pstage: pT2C", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 39,377,172", "no. of total reads: 79,197,750", "% mapped: 49.7%")
SRP036848	SRS554973	SRX467308	SRR1164868	22260176	19074366	0.856882982417	TRUE	FALSE	18895254	961125641	prostate	esc	2014-02-07T07:53:21.420	2014-04-12T01:08:10.710	2014-04-12T01:28:38.830	87	GSM1323728	SRR1164868.bw	Prostate_UTPC147	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0027.1", "external id: UTPC147", "tissue: prostate", "months to bcr: 49.5", "months total f/u: 125", "bcr: 1", "prepsa: 6.5", "race: NA", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 17,789,548", "no. of total reads: 29,595,182", "% mapped: 60.1%")
SRP036848	SRS554976	SRX467311	SRR1164871	87295154	74755944	0.856358464068	TRUE	FALSE	74159220	3701991894	prostate	esc	2014-02-07T07:53:18.907	2014-04-12T01:08:17.923	2014-04-12T01:28:40.037	85	GSM1323731	SRR1164871.bw	Prostate_UTPC170	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0030.1", "external id: UTPC170", "tissue: prostate", "months to bcr: 9.6", "months total f/u: 36", "bcr: 1", "prepsa: 13.03", "race: NA", "pstage: pT1C", "gleason score: 437", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 70,019,189", "no. of total reads: 106,116,046", "% mapped: 66.0%")
SRP036848	SRS554913	SRX467248	SRR1164808	72830646	62340000	0.855958355772	TRUE	FALSE	61657005	3074457967	prostate	esc	2014-02-07T07:56:09.443	2014-04-12T01:14:33.590	2014-04-12T01:28:19.007	85	GSM1323668	SRR1164808.bw	Prostate_VA-PC-91-62	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0062", "external id: VA-PC-91-62", "tissue: prostate", "months to bcr: NA", "months total f/u: 171.1", "bcr: 0", "prepsa: 2.9", "race: W", "pstage: pT2C", "gleason score: 448", "tgleason: 8", "sms: Negative", "no of uniquely mapped reads: 58,589,794", "no. of total reads: 93,107,360", "% mapped: 62.9%")
SRP036848	SRS554978	SRX467313	SRR1164873	120636844	103174674	0.855250109162	TRUE	FALSE	102138996	5097454585	prostate	esc	2014-02-07T07:51:29.020	2014-04-12T01:08:24.890	2014-04-12T01:28:40.673	85	GSM1323733	SRR1164873.bw	Prostate_VA-PC-00-88	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0088", "external id: VA-PC-00-88", "tissue: prostate", "months to bcr: 1.6", "months total f/u: 1.6", "bcr: 1", "prepsa: 25.88", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 94,922,445", "no. of total reads: 138,978,248", "% mapped: 68.3%")
SRP036848	SRS554895	SRX467230	SRR1164790	25829324	22076446	0.854704753404	TRUE	FALSE	21890790	1092208504	prostate	mcc	2014-02-07T07:55:04.383	2014-04-12T01:13:50.133	2014-04-12T01:28:13.143	85	GSM1323650	SRR1164790.bw	Prostate_MCC-PT184	c("collection site: Moffitt Cancer Center", "cgsr id: PT184", "external id: MCC-PT184", "tissue: prostate", "months to bcr: NA", "months total f/u: 98", "bcr: 0", "prepsa: 8.2", "race: NA", "pstage: pT3", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 20,241,959", "no. of total reads: 30,200,054", "% mapped: 67.0%")
SRP036848	SRS554996	SRX467331	SRR1164891	107486344	91719314	0.85331131925	TRUE	FALSE	90752912	4526441616	prostate	esc	2014-02-07T07:51:58.170	2014-04-12T01:07:16.463	2014-04-12T01:28:46.670	85	GSM1323751	SRR1164891.bw	Prostate_VA-PC-98-53	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0053", "external id: VA-PC-98-53", "tissue: prostate", "months to bcr: 2.2", "months total f/u: 2.2", "bcr: 1", "prepsa: 11.16", "race: B", "pstage: pT2A", "gleason score: 448", "tgleason: 8", "sms: Positive", "no of uniquely mapped reads: 85,477,421", "no. of total reads: 127,724,002", "% mapped: 66.9%")
SRP036848	SRS554902	SRX467237	SRR1164797	20853072	17706859	0.849124723686	TRUE	FALSE	17514247	890898869	prostate	esc	2014-02-07T07:55:42.590	2014-04-12T01:14:22.743	2014-04-12T01:28:15.270	86	GSM1323657	SRR1164797.bw	Prostate_UTPC162	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0028.1", "external id: UTPC162", "tissue: prostate", "months to bcr: NA", "months total f/u: 82", "bcr: 0", "prepsa: 7.35", "race: NA", "pstage: pT1C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 16,673,391", "no. of total reads: 26,114,500", "% mapped: 63.8%")
SRP036848	SRS554897	SRX467232	SRR1164792	19185126	16276292	0.848380771646	TRUE	FALSE	16119423	803709583	prostate	mcc	2014-02-07T07:55:24.383	2014-04-12T01:13:56.707	2014-04-12T01:28:13.797	84	GSM1323652	SRR1164792.bw	Prostate_MCC-PT236	c("collection site: Moffitt Cancer Center", "cgsr id: PT236", "external id: MCC-PT236", "tissue: prostate", "months to bcr: NA", "months total f/u: 57", "bcr: 0", "prepsa: 7.8", "race: W", "pstage: pT2", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 15,108,250", "no. of total reads: 22,822,922", "% mapped: 66.2%")
SRP036848	SRS554917	SRX467252	SRR1164812	53160250	44997583	0.846451681473	TRUE	FALSE	44570779	2224154956	prostate	esc	2014-02-07T07:57:06.103	2014-04-12T01:14:55.093	2014-04-12T01:28:20.220	84	GSM1323672	SRR1164812.bw	Prostate_VA-PC-92-66	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0066", "external id: VA-PC-92-66", "tissue: prostate", "months to bcr: NA", "months total f/u: 148.2", "bcr: 0", "prepsa: 9.17", "race: W", "pstage: pT2", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 42,010,928", "no. of total reads: 87,983,038", "% mapped: 47.7%")
SRP036848	SRS554956	SRX467291	SRR1164851	22603550	19121020	0.845929953481	TRUE	FALSE	18960794	1501107073	prostate	esc	2014-02-07T07:52:38.080	2014-04-12T01:17:35.957	2014-04-12T01:28:33.323	134	GSM1323711	SRR1164851.bw	Prostate_UTPC034-2	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0006.1", "external id: UTPC034", "tissue: prostate", "months to bcr: 0.0", "months total f/u: 50", "bcr: 1", "prepsa: 9", "race: NA", "pstage: pT2B", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 18,135,372", "no. of total reads: 43,876,620", "% mapped: 41.3%")
SRP036848	SRS554929	SRX467264	SRR1164824	18911760	15938427	0.842778620287	TRUE	FALSE	15831230	805541857	prostate	esc	2014-02-07T07:54:25.657	2014-04-12T01:13:17.363	2014-04-12T01:28:24.140	85	GSM1323684	SRR1164824.bw	Prostate_VA-PC-97-52	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0052", "external id: VA-PC-97-52", "tissue: prostate", "months to bcr: NA", "months total f/u: 96.1", "bcr: 0", "prepsa: 7.84", "race: W", "pstage: pT2C", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 14,877,664", "no. of total reads: 99,888,664", "% mapped: 14.9%")
SRP036848	SRS554958	SRX467293	SRR1164853	122863488	103139857	0.839467108406	TRUE	FALSE	101996943	5088489919	prostate	esc	2014-02-07T07:52:27.060	2014-04-12T01:17:59.077	2014-04-12T01:28:33.990	83	GSM1323713	SRR1164853.bw	Prostate_UTPC041	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC041", "external id: UTPC041", "tissue: prostate", "months to bcr: 0", "months total f/u: 54", "bcr: 1", "prepsa: 8.5", "race: NA", "pstage: pT1C", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 95,370,297", "no. of total reads: 150,202,416", "% mapped: 63.5%")
SRP036848	SRS554959	SRX467294	SRR1164854	21368200	17922265	0.838735363765	TRUE	FALSE	17739147	1377914563	prostate	esc	2014-02-07T07:52:43.150	2014-04-12T01:17:46.027	2014-04-12T01:28:34.247	130	GSM1323714	SRR1164854.bw	Prostate_UTPC058	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0008.1", "external id: UTPC058", "tissue: prostate", "months to bcr: 8.0", "months total f/u: 128", "bcr: 1", "prepsa: 6.5", "race: NA", "pstage: pT2B", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 17,542,055", "no. of total reads: 40,212,246", "% mapped: 43.6%")
SRP036848	SRS554893	SRX467228	SRR1164788	12845312	10769276	0.838381815872	TRUE	FALSE	10658953	531889258	prostate	mcc	2014-02-07T07:55:25.737	2014-04-12T01:13:37.380	2014-04-12T01:27:15.017	83	GSM1323648	SRR1164788.bw	Prostate_MCC-PT127	c("collection site: Moffitt Cancer Center", "cgsr id: PT127", "external id: MCC-PT127", "tissue: prostate", "months to bcr: NA", "months total f/u: 114", "bcr: 0", "prepsa: 7", "race: W", "pstage: pT2", "gleason score: 336", "tgleason: 6", "sms: Positive", "no of uniquely mapped reads: 9,995,053", "no. of total reads: 15,194,156", "% mapped: 65.8%")
SRP036848	SRS554926	SRX467261	SRR1164821	48545376	40633252	0.83701590858	TRUE	FALSE	40224079	2047277521	prostate	esc	2014-02-07T07:54:12.963	2014-04-12T01:13:07.967	2014-04-12T01:28:23.137	85	GSM1323681	SRR1164821.bw	Prostate_VA-PC-97-49	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0049", "external id: VA-PC-97-49", "tissue: prostate", "months to bcr: NA", "months total f/u: 97.3", "bcr: 0", "prepsa: 10.63", "race: W", "pstage: pT2A", "gleason score: 336", "tgleason: 6", "sms: Negative", "no of uniquely mapped reads: 38,014,897", "no. of total reads: 83,903,516", "% mapped: 45.3%")
SRP036848	SRS554930	SRX467265	SRR1164825	122695822	102597653	0.836195164005	TRUE	FALSE	101195244	5047019592	prostate	esc	2014-02-07T07:54:34.977	2014-04-12T01:13:11.360	2014-04-12T01:28:24.460	83	GSM1323685	SRR1164825.bw	Prostate_VA-PC-97-74	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0074", "external id: VA-PC-97-74", "tissue: prostate", "months to bcr: NA", "months total f/u: 97.9", "bcr: 0", "prepsa: 12.56", "race: W", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 96,287,979", "no. of total reads: 144,564,326", "% mapped: 66.6%")
SRP036848	SRS554896	SRX467231	SRR1164791	16911312	14140948	0.836182787001	TRUE	FALSE	13996633	697993333	prostate	mcc	2014-02-07T07:55:29.630	2014-04-12T01:13:41.800	2014-04-12T01:28:13.493	83	GSM1323651	SRR1164791.bw	Prostate_MCC-PT199	c("collection site: Moffitt Cancer Center", "cgsr id: PT199", "external id: MCC-PT199", "tissue: prostate", "months to bcr: NA", "months total f/u: 69", "bcr: 0", "prepsa: 5.02", "race: W", "pstage: pT2", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 13,030,802", "no. of total reads: 20,244,858", "% mapped: 64.4%")
SRP036848	SRS554968	SRX467303	SRR1164863	112770306	94281544	0.836049376331	TRUE	FALSE	93418516	4662594133	prostate	esc	2014-02-07T07:53:14.040	2014-04-12T01:18:15.417	2014-04-12T01:28:37.163	83	GSM1323723	SRR1164863.bw	Prostate_UTPC127	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0021.1", "external id: UTPC127", "tissue: prostate", "months to bcr: 29.9", "months total f/u: 61", "bcr: 1", "prepsa: 9", "race: NA", "pstage: pT3B", "gleason score: 437", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 86,871,782", "no. of total reads: 135,853,972", "% mapped: 63.9%")
SRP036848	SRS554980	SRX467314	SRR1164874	131877552	110069733	0.834635852203	TRUE	FALSE	108517724	5413742774	prostate	esc	2014-02-07T07:51:23.200	2014-04-12T01:12:04.233	2014-04-12T01:28:41.290	83	GSM1323734	SRR1164874.bw	Prostate_VA-PC-00-96	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0096", "external id: VA-PC-00-96", "tissue: prostate", "months to bcr: 3.6", "months total f/u: 3.6", "bcr: 1", "prepsa: 6.68", "race: W", "pstage: pT2C", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 102,465,236", "no. of total reads: 155,745,294", "% mapped: 65.8%")
SRP036848	SRS554995	SRX467329	SRR1164889	92091802	76703744	0.832905235148	TRUE	FALSE	75887011	3787369545	prostate	esc	2014-02-07T07:52:13.090	2014-04-12T01:07:01.577	2014-04-12T01:28:46.360	83	GSM1323749	SRR1164889.bw	Prostate_VA-PC-96-44	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0044", "external id: VA-PC-96-44", "tissue: prostate", "months to bcr: 26.0", "months total f/u: 26.0", "bcr: 1", "prepsa: 3", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 70,792,590", "no. of total reads: 114,205,668", "% mapped: 62.0%")
SRP036848	SRS554894	SRX467229	SRR1164789	13655482	11369499	0.832595949378	TRUE	FALSE	11248050	561378605	prostate	mcc	2014-02-07T07:55:27.020	2014-04-12T01:13:54.533	2014-04-12T01:27:15.290	83	GSM1323649	SRR1164789.bw	Prostate_MCC-PT168	c("collection site: Moffitt Cancer Center", "cgsr id: PT168", "external id: MCC-PT168", "tissue: prostate", "months to bcr: NA", "months total f/u: 87", "bcr: 0", "prepsa: 1.8", "race: W", "pstage: pT2", "gleason score: 336", "tgleason: 6", "sms: Negative", "no of uniquely mapped reads: 10,476,268", "no. of total reads: 16,221,792", "% mapped: 64.6%")
SRP036848	SRS554951	SRX467286	SRR1164846	68722722	57182964	0.832082349707	TRUE	FALSE	56370225	2811846401	prostate	esc	2014-02-07T07:52:02.883	2014-04-12T01:17:28.197	2014-04-12T01:28:31.617	83	GSM1323706	SRR1164846.bw	Prostate_UTPC019	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC019", "external id: UTPC019", "tissue: prostate", "months to bcr: 21.6", "months total f/u: 89", "bcr: 1", "prepsa: 5.98", "race: NA", "pstage: pT2A", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 52,303,635", "no. of total reads: 94,879,158", "% mapped: 55.1%")
SRP036848	SRS554899	SRX467233	SRR1164793	27662442	22841386	0.825718351258	TRUE	FALSE	22611091	1127872672	prostate	mcc	2014-02-07T07:55:21.270	2014-04-12T01:13:52.483	2014-04-12T01:28:14.370	82	GSM1323653	SRR1164793.bw	Prostate_MCC-PT243	c("collection site: Moffitt Cancer Center", "cgsr id: PT243", "external id: MCC-PT243", "tissue: prostate", "months to bcr: NA", "months total f/u: 50", "bcr: 0", "prepsa: 6.6", "race: NA", "pstage: pT2", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 20,783,424", "no. of total reads: 33,452,206", "% mapped: 62.1%")
SRP036848	SRS554932	SRX467267	SRR1164827	62214162	51293835	0.824472006872	TRUE	FALSE	50446184	2515314514	prostate	esc	2014-02-07T07:54:27.383	2014-04-12T01:13:39.477	2014-04-12T01:28:25.070	82	GSM1323687	SRR1164827.bw	Prostate_VA-PC-99-55	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0055", "external id: VA-PC-99-55", "tissue: prostate", "months to bcr: NA", "months total f/u: 69.8", "bcr: 0", "prepsa: 6.63", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 47,695,326", "no. of total reads: 93,161,306", "% mapped: 51.2%")
SRP036848	SRS554986	SRX467321	SRR1164881	94633752	77920745	0.823392746808	TRUE	FALSE	77081762	3844793360	prostate	esc	2014-02-07T07:51:25.993	2014-04-12T01:12:22.400	2014-04-12T01:28:43.243	82	GSM1323741	SRR1164881.bw	Prostate_VA-PC-93-21	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0021", "external id: VA-PC-93-21", "tissue: prostate", "months to bcr: 95.0", "months total f/u: 95.0", "bcr: 1", "prepsa: 6.2", "race: W", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: unknown", "no of uniquely mapped reads: 73,477,400", "no. of total reads: 112,486,354", "% mapped: 65.3%")
SRP036848	SRS554943	SRX467278	SRR1164838	111343572	91306446	0.820042364008	TRUE	FALSE	90216389	4502728963	prostate	mcc	2014-02-07T07:54:44.580	2014-04-12T01:17:08.827	2014-04-12T01:28:28.757	82	GSM1323698	SRR1164838.bw	Prostate_MCC-PT197	c("collection site: Moffitt Cancer Center", "cgsr id: PT197", "external id: MCC-PT197", "tissue: prostate", "months to bcr: 26.50", "months total f/u: 104.05", "bcr: 1", "prepsa: 6.1", "race: W", "pstage: pT1C", "gleason score: 336", "tgleason: 6", "sms: Positive", "no of uniquely mapped reads: 83,866,689", "no. of total reads: 137,631,984", "% mapped: 60.9%")
SRP036848	SRS554964	SRX467299	SRR1164859	100165110	81564310	0.814298611562	TRUE	FALSE	80448514	4015007645	prostate	esc	2014-02-07T07:52:47.923	2014-04-12T01:18:12.483	2014-04-12T01:28:35.883	81	GSM1323719	SRR1164859.bw	Prostate_UTPC104	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0017.1", "external id: UTPC104", "tissue: prostate", "months to bcr: 0.0", "months total f/u: 88", "bcr: 1", "prepsa: 3.86", "race: NA", "pstage: pT2A", "gleason score: 437", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 75,764,019", "no. of total reads: 128,654,064", "% mapped: 58.9%")
SRP036848	SRS554981	SRX467316	SRR1164876	104879054	85321402	0.813521849654	TRUE	FALSE	83880828	4183839250	prostate	esc	2014-02-07T07:51:31.567	2014-04-12T01:12:06.753	2014-04-12T01:28:41.610	81	GSM1323736	SRR1164876.bw	Prostate_VA-PC-90-4	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0004", "external id: VA-PC-90-4", "tissue: prostate", "months to bcr: 36.0", "months total f/u: 36.0", "bcr: 1", "prepsa: NA", "race: NA", "pstage: pT3B", "gleason score: 448", "tgleason: 8", "sms: Positive", "no of uniquely mapped reads: 79,371,670", "no. of total reads: 126,005,324", "% mapped: 63.0%")
SRP036848	SRS554993	SRX467328	SRR1164888	113079194	91115655	0.805768521838	TRUE	FALSE	89556090	4467531930	prostate	esc	2014-02-07T07:51:53.397	2014-04-12T01:06:52.703	2014-04-12T01:28:45.707	80	GSM1323748	SRR1164888.bw	Prostate_VA-PC-96-43	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0043", "external id: VA-PC-96-43", "tissue: prostate", "months to bcr: 48.9", "months total f/u: 48.9", "bcr: 1", "prepsa: 9.1", "race: W", "pstage: pT2C", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 84,811,432", "no. of total reads: 138,708,238", "% mapped: 61.1%")
SRP036848	SRS554946	SRX467281	SRR1164841	99306596	79976473	0.805349052544	TRUE	FALSE	79057763	3946108432	prostate	esc	2014-02-07T07:54:49.377	2014-04-12T01:17:17.197	2014-04-12T01:28:30.030	80	GSM1323701	SRR1164841.bw	Prostate_UTPC004-2	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0001.1", "external id: UTPC004", "tissue: prostate", "months to bcr: 38.2", "months total f/u: 38", "bcr: 1", "prepsa: 7.2", "race: NA", "pstage: pT1C", "gleason score: 549", "tgleason: 9", "sms: Negative", "no of uniquely mapped reads: 73,667,210", "no. of total reads: 125,088,072", "% mapped: 58.9%")
SRP036848	SRS554994	SRX467330	SRR1164890	97707828	78398473	0.802376581332	TRUE	FALSE	77102635	3846534496	prostate	esc	2014-02-07T07:51:50.983	2014-04-12T01:07:47.183	2014-04-12T01:28:46.047	80	GSM1323750	SRR1164890.bw	Prostate_VA-PC-97-46	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0046", "external id: VA-PC-97-46", "tissue: prostate", "months to bcr: 2.8", "months total f/u: 2.8", "bcr: 1", "prepsa: 29.3", "race: W", "pstage: pT2C", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 71,695,143", "no. of total reads: 121,983,482", "% mapped: 58.8%")
SRP036848	SRS554961	SRX467296	SRR1164856	22852002	18321661	0.80175299302	TRUE	FALSE	18092441	921060033	prostate	esc	2014-02-07T07:52:33.140	2014-04-12T01:18:09.310	2014-04-12T01:28:34.800	81	GSM1323716	SRR1164856.bw	Prostate_UTPC093	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0013.1", "external id: UTPC093", "tissue: prostate", "months to bcr: 0.0", "months total f/u: 102", "bcr: 1", "prepsa: 5.3", "race: NA", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 16,692,025", "no. of total reads: 29,347,406", "% mapped: 56.9%")
SRP036848	SRS554962	SRX467297	SRR1164857	18559892	14866565	0.801004930417	TRUE	FALSE	14676936	746728318	prostate	esc	2014-02-07T07:52:45.520	2014-04-12T01:17:52.910	2014-04-12T01:28:35.177	81	GSM1323717	SRR1164857.bw	Prostate_UTPC099	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0015.1", "external id: UTPC099", "tissue: prostate", "months to bcr: 0.0", "months total f/u: 26", "bcr: 1", "prepsa: 4.07", "race: NA", "pstage: pT2B", "gleason score: 459", "tgleason: 9", "sms: Positive", "no of uniquely mapped reads: 13,757,579", "no. of total reads: 24,788,064", "% mapped: 55.5%")
SRP036848	SRS554949	SRX467284	SRR1164844	132371240	105956885	0.800452462332	TRUE	FALSE	104413321	5210546357	prostate	esc	2014-02-07T07:54:47.063	2014-04-12T01:17:26.290	2014-04-12T01:28:30.940	80	GSM1323704	SRR1164844.bw	Prostate_UTPC009	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC009", "external id: UTPC009", "tissue: prostate", "months to bcr: 23.0", "months total f/u: 68", "bcr: 1", "prepsa: 22.3", "race: NA", "pstage: pT2B", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 95,747,467", "no. of total reads: 166,836,094", "% mapped: 57.4%")
SRP036848	SRS554953	SRX467288	SRR1164848	64253906	51388531	0.799772872952	TRUE	FALSE	50530864	2519690350	prostate	esc	2014-02-07T07:52:18.413	2014-04-12T01:17:42.670	2014-04-12T01:28:32.297	79	GSM1323708	SRR1164848.bw	Prostate_UTPC021	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC021", "external id: UTPC021", "tissue: prostate", "months to bcr: 27.63", "months total f/u: 74", "bcr: 1", "prepsa: 7", "race: NA", "pstage: pT1C", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 46,997,412", "no. of total reads: 89,032,182", "% mapped: 52.8%")
SRP036848	SRS554954	SRX467289	SRR1164849	89551472	71615470	0.799712929342	TRUE	FALSE	70760398	3532329714	prostate	esc	2014-02-07T07:52:05.310	2014-04-12T01:17:32.293	2014-04-12T01:28:32.590	79	GSM1323709	SRR1164849.bw	Prostate_UTPC029-2	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0005.1", "external id: UTPC029", "tissue: prostate", "months to bcr: 18.0", "months total f/u: 43", "bcr: 1", "prepsa: 5.6", "race: W", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 65,468,819", "no. of total reads: 114,519,126", "% mapped: 57.2%")
SRP036848	SRS554948	SRX467283	SRR1164843	23001374	18349683	0.797764646582	TRUE	FALSE	18116880	922074744	prostate	esc	2014-02-07T07:55:06.970	2014-04-12T01:17:24.280	2014-04-12T01:28:30.623	81	GSM1323703	SRR1164843.bw	Prostate_UTPC009-2	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0002.1", "external id: UTPC009", "tissue: prostate", "months to bcr: 23.0", "months total f/u: 53", "bcr: 1", "prepsa: 22.3", "race: NA", "pstage: pT2B", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 16,891,119", "no. of total reads: 29,955,374", "% mapped: 56.4%")
SRP036848	SRS554938	SRX467273	SRR1164833	104026054	82867900	0.796607165355	TRUE	FALSE	81681000	4076693028	prostate	esc	2014-02-07T07:54:42.243	2014-04-12T01:15:11.307	2014-04-12T01:28:27.123	79	GSM1323693	SRR1164833.bw	Prostate_VA-PC-99-80	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0080", "external id: VA-PC-99-80", "tissue: prostate", "months to bcr: NA", "months total f/u: 73.8", "bcr: 0", "prepsa: 5.37", "race: B", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 82,407,763", "no. of total reads: 137,313,040", "% mapped: 60.0%")
SRP036848	SRS554966	SRX467301	SRR1164861	33511210	26642475	0.795031722221	TRUE	FALSE	26308214	1313301232	prostate	esc	2014-02-07T07:52:35.683	2014-04-12T01:18:18.853	2014-04-12T01:28:36.540	79	GSM1323721	SRR1164861.bw	Prostate_UTPC114	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0019.1", "external id: UTPC114", "tissue: prostate", "months to bcr: 29.8", "months total f/u: 43", "bcr: 1", "prepsa: 7.2", "race: NA", "pstage: pT1C", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 64,266,720", "no. of total reads: 101,087,258", "% mapped: 63.6%")
SRP036848	SRS554974	SRX467309	SRR1164869	47709560	37665626	0.789477538674	TRUE	FALSE	32883546	1628900602	prostate	esc	2014-02-07T07:53:26.417	2014-04-12T01:07:59.030	2014-04-12T01:28:39.270	78	GSM1323729	SRR1164869.bw	Prostate_UTPC160	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC160", "external id: UTPC160", "tissue: prostate", "months to bcr: 27.5", "months total f/u: 112", "bcr: 1", "prepsa: 8.27", "race: NA", "pstage: pT1C", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 32,943,917", "no. of total reads: 116,678,112", "% mapped: 28.2%")
SRP036848	SRS554892	SRX467227	SRR1164787	250705636	197818908	0.789048507868	TRUE	FALSE	193939991	9671270683	prostate	mcc	2014-02-07T07:55:31.877	2014-04-12T01:13:47.300	2014-04-12T01:27:14.673	78	GSM1323647	SRR1164787.bw	Prostate_MCC-PT081	c("collection site: Moffitt Cancer Center", "cgsr id: PT081", "external id: MCC-PT081", "tissue: prostate", "months to bcr: NA", "months total f/u: 119", "bcr: 0", "prepsa: NA", "race: W", "pstage: pT3", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 251,516,583", "no. of total reads: 399,472,616", "% mapped: 63.0%")
SRP036848	SRS554952	SRX467287	SRR1164847	87812662	69075479	0.786623220692	TRUE	FALSE	68069255	3397658887	prostate	esc	2014-02-07T07:52:07.843	2014-04-12T01:17:39.343	2014-04-12T01:28:32.020	78	GSM1323707	SRR1164847.bw	Prostate_UTPC021-2	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0004.1", "external id: UTPC021", "tissue: prostate", "months to bcr: 27.6", "months total f/u: 82", "bcr: 1", "prepsa: 7", "race: NA", "pstage: pT1C", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 46,997,412", "no. of total reads: 117,694,252", "% mapped: 39.9%")
SRP036848	SRS554950	SRX467285	SRR1164845	83638540	65765230	0.786302941204	TRUE	FALSE	64859176	3237754937	prostate	esc	2014-02-07T07:55:14.733	2014-04-12T01:17:30.223	2014-04-12T01:28:31.243	78	GSM1323705	SRR1164845.bw	Prostate_UTPC019-2	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0003.1", "external id: UTPC019", "tissue: prostate", "months to bcr: 21.6", "months total f/u: 84", "bcr: 1", "prepsa: 5.98", "race: NA", "pstage: pT2A", "gleason score: 437", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 59,982,964", "no. of total reads: 109,542,098", "% mapped: 54.8%")
SRP036848	SRS554963	SRX467298	SRR1164858	105900272	82624112	0.780206796825	TRUE	FALSE	81478016	4067731869	prostate	esc	2014-02-07T07:52:29.810	2014-04-12T01:18:05.713	2014-04-12T01:28:35.567	78	GSM1323718	SRR1164858.bw	Prostate_UTPC101	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0016.1", "external id: UTPC101", "tissue: prostate", "months to bcr: 0.0", "months total f/u: 35", "bcr: 1", "prepsa: 14.43", "race: NA", "pstage: pT3B", "gleason score: 448", "tgleason: 8", "sms: Positive", "no of uniquely mapped reads: 75,959,530", "no. of total reads: 137,742,040", "% mapped: 55.1%")
SRP036848	SRS554947	SRX467282	SRR1164842	58301306	45404842	0.778796310326	TRUE	FALSE	44727992	2231825273	prostate	esc	2014-02-07T07:55:13.373	2014-04-12T01:17:22.487	2014-04-12T01:28:30.340	77	GSM1323702	SRR1164842.bw	Prostate_UTPC004	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC004", "external id: UTPC004", "tissue: prostate", "months to bcr: 38.2", "months total f/u: 60", "bcr: 1", "prepsa: 7.2", "race: NA", "pstage: pT1C", "gleason score: 549", "tgleason: 9", "sms: Negative", "no of uniquely mapped reads: 94,148,591", "no. of total reads: 152,910,392", "% mapped: 61.6%")
SRP036848	SRS554983	SRX467318	SRR1164878	112943286	87290573	0.772870845993	TRUE	FALSE	85450495	4261291775	prostate	esc	2014-02-07T07:53:36.380	2014-04-12T01:12:10.107	2014-04-12T01:28:42.233	77	GSM1323738	SRR1164878.bw	Prostate_VA-PC-92-11	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0011", "external id: VA-PC-92-11", "tissue: prostate", "months to bcr: 0.8", "months total f/u: 0.8", "bcr: 1", "prepsa: 65", "race: W", "pstage: pT3B", "gleason score: 448", "tgleason: 8", "sms: Positive", "no of uniquely mapped reads: 91,714,533", "no. of total reads: 148,368,488", "% mapped: 61.8%")
SRP036848	SRS554934	SRX467269	SRR1164829	61793332	47691004	0.771782366421	TRUE	FALSE	47370487	2410238512	prostate	esc	2014-02-07T07:54:18.053	2014-04-12T01:15:23.330	2014-04-12T01:28:25.713	78	GSM1323689	SRR1164829.bw	Prostate_VA-PC-99-76	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0076", "external id: VA-PC-99-76", "tissue: prostate", "months to bcr: NA", "months total f/u: 82.3", "bcr: 0", "prepsa: 7.22", "race: W", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 45,313,892", "no. of total reads: 82,363,536", "% mapped: 55.0%")
SRP036848	SRS554945	SRX467280	SRR1164840	100829264	76997600	0.763643380358	TRUE	FALSE	75297593	3757669015	prostate	mcc	2014-02-07T07:54:56.497	2014-04-12T01:17:13.750	2014-04-12T01:28:29.647	76	GSM1323700	SRR1164840.bw	Prostate_MCC-PT264	c("collection site: Moffitt Cancer Center", "cgsr id: PT264", "external id: MCC-PT264", "tissue: prostate", "months to bcr: 154.22", "months total f/u: 180.56", "bcr: 1", "prepsa: NA", "race: W", "pstage: NA", "gleason score: 325", "tgleason: 5", "sms: Negative", "no of uniquely mapped reads: 71,163,980", "no. of total reads: 131,689,532", "% mapped: 54.0%")
SRP036848	SRS554955	SRX467290	SRR1164850	64507322	49199563	0.762697341551	TRUE	FALSE	48367720	2413624089	prostate	esc	2014-02-07T07:52:24.433	2014-04-12T01:17:49.490	2014-04-12T01:28:32.930	76	GSM1323710	SRR1164850.bw	Prostate_UTPC029	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC029", "external id: UTPC029", "tissue: prostate", "months to bcr: 18", "months total f/u: 64", "bcr: 1", "prepsa: 5.6", "race: NA", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 100,596,892", "no. of total reads: 172,308,510", "% mapped: 58.4%")
SRP036848	SRS554957	SRX467292	SRR1164852	30811896	23249549	0.754564048899	TRUE	FALSE	22740714	1134648121	prostate	esc	2014-02-07T07:52:10.290	2014-04-12T01:18:00.960	2014-04-12T01:28:33.707	75	GSM1323712	SRR1164852.bw	Prostate_UTPC034	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: UTPC034", "external id: UTPC034", "tissue: prostate", "months to bcr: 0", "months total f/u: 49", "bcr: 1", "prepsa: 9", "race: NA", "pstage: pT2B", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 111,754,397", "no. of total reads: 179,885,276", "% mapped: 62.1%")
SRP036848	SRS554944	SRX467279	SRR1164839	128474606	78330529	0.609696588601	TRUE	FALSE	77088143	3844940410	prostate	mcc	2014-02-07T07:55:01.387	2014-04-12T01:17:20.287	2014-04-12T01:28:29.163	60	GSM1323699	SRR1164839.bw	Prostate_MCC-PT220	c("collection site: Moffitt Cancer Center", "cgsr id: PT220", "external id: MCC-PT220", "tissue: prostate", "months to bcr: 22.13", "months total f/u: 74.24", "bcr: 1", "prepsa: 10.8", "race: W", "pstage: pT1C", "gleason score: 336", "tgleason: 6", "sms: Positive", "no of uniquely mapped reads: 72,366,520", "no. of total reads: 167,427,236", "% mapped: 43.2%")
SRP036848	SRS554916	SRX467251	SRR1164811	99484864	60512329	0.608256638919	TRUE	FALSE	60103445	2997388231	prostate	esc	2014-02-07T07:57:08.587	2014-04-12T01:15:08.327	2014-04-12T01:28:19.917	60	GSM1323671	SRR1164811.bw	Prostate_VA-PC-92-14	c("collection site: Atlanta VA Medical Center", "cgsr id: CM.4-0014", "external id: VA-PC-92-14", "tissue: prostate", "months to bcr: NA", "months total f/u: 116.5", "bcr: 0", "prepsa: 4.61", "race: W", "pstage: pT2C", "gleason score: 347", "tgleason: 7", "sms: Negative", "no of uniquely mapped reads: 58,111,320", "no. of total reads: 123,916,290", "% mapped: 46.9%")
SRP036848	SRS554971	SRX467306	SRR1164866	78203320	0	0	TRUE	FALSE	0	NA	prostate	esc	2014-02-07T07:53:23.997	2014-04-12T01:08:14.417	2014-04-12T01:28:38.123	80	GSM1323726	NA	Prostate_UTPC141	c("collection site: U. Toronto Sunnybrook Research Centre", "cgsr id: CM.1-0025.1", "external id: UTPC141", "tissue: prostate", "months to bcr: 18.2", "months total f/u: 79", "bcr: 1", "prepsa: 23.9", "race: NA", "pstage: pT2A", "gleason score: 347", "tgleason: 7", "sms: Positive", "no of uniquely mapped reads: 57,654,792", "no. of total reads: 118,237,400", "% mapped: 48.8%")