project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP041298 SRS594764 SRX522409 SRR1257177 33216644 33216644 1 FALSE FALSE 33199609 3300225355 NA NA 2014-04-18T19:31:22.390 2015-08-20T01:15:03.913 2015-08-20T01:17:59.377 100 GSM1371395 SRR1257177.bw WT_total_RNA_CT00_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594765 SRX522410 SRR1257178 34741769 34741769 1 FALSE FALSE 34722692 3450202049 NA NA 2014-04-18T19:31:37.633 2015-08-20T01:15:05.127 2015-08-20T01:17:59.027 100 GSM1371396 SRR1257178.bw WT_total_RNA_CT02_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594766 SRX522411 SRR1257179 31811581 31811581 1 FALSE FALSE 31777116 3152574909 NA NA 2014-04-18T19:31:17.283 2015-08-20T01:15:06.437 2015-08-20T01:17:58.743 100 GSM1371397 SRR1257179.bw WT_total_RNA_CT04_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594767 SRX522412 SRR1257180 34295689 34295689 1 FALSE FALSE 34268874 3398275744 NA NA 2014-04-18T19:31:24.843 2015-08-20T01:15:07.357 2015-08-20T01:17:58.230 100 GSM1371398 SRR1257180.bw WT_total_RNA_CT06_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594768 SRX522413 SRR1257181 31666044 31666044 1 FALSE FALSE 31648155 3145722664 NA NA 2014-04-18T19:31:35.157 2015-08-20T01:15:08.247 2015-08-20T01:17:57.723 100 GSM1371399 SRR1257181.bw WT_total_RNA_CT08_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594769 SRX522414 SRR1257182 31227335 31227335 1 FALSE FALSE 31208546 3100783699 NA NA 2014-04-18T19:31:19.907 2015-08-20T01:15:09.157 2015-08-20T01:22:07.217 100 GSM1371400 SRR1257182.bw WT_total_RNA_CT10_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594770 SRX522415 SRR1257183 28754100 28754100 1 FALSE FALSE 28730775 2855509264 NA NA 2014-04-18T19:31:27.473 2015-08-20T01:15:10.303 2015-08-20T01:22:06.940 100 GSM1371401 SRR1257183.bw WT_total_RNA_CT12_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594771 SRX522416 SRR1257184 33505289 33505289 1 FALSE FALSE 33468560 3327008814 NA NA 2014-04-18T19:31:32.560 2015-08-20T01:15:11.597 2015-08-20T01:22:06.443 100 GSM1371402 SRR1257184.bw WT_total_RNA_CT14_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594772 SRX522417 SRR1257185 28933283 28933283 1 FALSE FALSE 28916398 2875218493 NA NA 2014-04-18T19:31:30.050 2015-08-20T01:15:12.777 2015-08-20T01:22:06.103 100 GSM1371403 SRR1257185.bw WT_total_RNA_CT16_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594773 SRX522418 SRR1257186 31882834 31882834 1 FALSE FALSE 31860059 3167011010 NA NA 2014-04-18T19:31:40.603 2015-08-20T01:15:14.217 2015-08-20T01:22:05.817 100 GSM1371404 SRR1257186.bw WT_total_RNA_CT18_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594774 SRX522419 SRR1257187 32603330 32603330 1 FALSE FALSE 32579993 3231972351 NA NA 2014-04-18T19:31:45.993 2015-08-20T01:15:16.033 2015-08-20T01:22:05.413 100 GSM1371405 SRR1257187.bw WT_total_RNA_CT20_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594775 SRX522420 SRR1257188 32718339 32718339 1 FALSE FALSE 32695019 3250002359 NA NA 2014-04-18T19:31:43.507 2015-08-20T01:15:17.260 2015-08-20T01:22:05.153 100 GSM1371406 SRR1257188.bw WT_total_RNA_CT22_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: None") SRP041298 SRS594776 SRX522421 SRR1257189 28588951 28588951 1 FALSE FALSE 28574856 2843631629 NA NA 2014-04-18T19:31:48.627 2015-08-20T01:15:18.737 2015-08-20T01:22:04.523 100 GSM1371407 SRR1257189.bw WT_total_RNA_CT00_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594777 SRX522422 SRR1257190 30049203 30049203 1 FALSE FALSE 30032593 2988012945 NA NA 2014-04-18T19:31:53.740 2015-08-20T01:15:19.957 2015-08-20T01:22:04.250 100 GSM1371408 SRR1257190.bw WT_total_RNA_CT02_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594778 SRX522423 SRR1257191 30218054 30218054 1 FALSE FALSE 30190840 2999611535 NA NA 2014-04-18T19:31:51.190 2015-08-20T01:15:21.190 2015-08-20T01:22:04.003 100 GSM1371409 SRR1257191.bw WT_total_RNA_CT04_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594779 SRX522424 SRR1257192 33972438 33972438 1 FALSE FALSE 33952179 3369136516 NA NA 2014-04-18T19:32:01.337 2015-08-20T01:15:22.707 2015-08-20T01:22:03.760 100 GSM1371410 SRR1257192.bw WT_total_RNA_CT06_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594780 SRX522425 SRR1257193 30529841 30529841 1 FALSE FALSE 30510157 3031407017 NA NA 2014-04-18T19:31:58.843 2015-08-20T01:11:56.997 2015-08-20T01:17:57.260 100 GSM1371411 SRR1257193.bw WT_total_RNA_CT08_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594781 SRX522426 SRR1257194 33561603 33561603 1 FALSE FALSE 33542678 3331372981 NA NA 2014-04-18T19:31:56.327 2015-08-20T01:11:58.387 2015-08-20T01:17:56.720 100 GSM1371412 SRR1257194.bw WT_total_RNA_CT10_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594782 SRX522427 SRR1257195 30093373 30093373 1 FALSE FALSE 30079502 2989446640 NA NA 2014-04-18T19:32:06.767 2015-08-20T01:12:00.117 2015-08-20T01:17:56.187 100 GSM1371413 SRR1257195.bw WT_total_RNA_CT12_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594783 SRX522428 SRR1257196 33370385 33370385 1 FALSE FALSE 33351946 3310613912 NA NA 2014-04-18T19:33:40.327 2015-08-20T01:12:01.420 2015-08-20T01:17:55.713 100 GSM1371414 SRR1257196.bw WT_total_RNA_CT14_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594784 SRX522429 SRR1257197 32377099 32377099 1 FALSE FALSE 32357753 3214227839 NA NA 2014-04-18T19:32:04.140 2015-08-20T01:12:02.493 2015-08-20T01:17:55.280 100 GSM1371415 SRR1257197.bw WT_total_RNA_CT16_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594785 SRX522430 SRR1257198 34060037 34060037 1 FALSE FALSE 34041086 3381716713 NA NA 2014-04-18T19:33:45.390 2015-08-20T01:12:03.770 2015-08-20T01:17:54.830 100 GSM1371416 SRR1257198.bw WT_total_RNA_CT18_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594786 SRX522431 SRR1257199 30529234 30529234 1 FALSE FALSE 30511896 3032024888 NA NA 2014-04-18T19:33:37.803 2015-08-20T01:12:04.657 2015-08-20T01:17:54.577 100 GSM1371417 SRR1257199.bw WT_total_RNA_CT20_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594787 SRX522432 SRR1257200 28879555 28879555 1 FALSE FALSE 28865476 2870745229 NA NA 2014-04-18T19:33:42.777 2015-08-20T01:12:05.560 2015-08-20T01:17:54.323 100 GSM1371418 SRR1257200.bw WT_total_RNA_CT22_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: None") SRP041298 SRS594788 SRX522433 SRR1257201 30029609 30029609 1 FALSE FALSE 30013284 2982445660 NA NA 2014-04-18T19:33:53.033 2015-08-20T01:12:06.487 2015-08-20T01:17:53.857 100 GSM1371419 SRR1257201.bw Bmal1_kd_total_RNA_CT00_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594789 SRX522434 SRR1257202 33947469 33947469 1 FALSE FALSE 33926896 3370934589 NA NA 2014-04-18T19:33:50.577 2015-08-20T01:12:07.497 2015-08-20T01:17:53.550 100 GSM1371420 SRR1257202.bw Bmal1_kd_total_RNA_CT02_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594790 SRX522435 SRR1257203 34611402 34611402 1 FALSE FALSE 34581929 3437304628 NA NA 2014-04-18T19:33:47.940 2015-08-20T01:12:08.933 2015-08-20T01:17:53.150 100 GSM1371421 SRR1257203.bw Bmal1_kd_total_RNA_CT04_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594791 SRX522436 SRR1257204 41322238 41322238 1 FALSE FALSE 41294041 4100731812 NA NA 2014-04-18T19:33:58.083 2015-08-20T01:12:09.897 2015-08-20T01:17:52.763 100 GSM1371422 SRR1257204.bw Bmal1_kd_total_RNA_CT06_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594792 SRX522437 SRR1257205 31226240 31226240 1 FALSE FALSE 31201377 3099238863 NA NA 2014-04-18T19:34:13.443 2015-08-20T01:12:12.047 2015-08-20T01:17:52.430 100 GSM1371423 SRR1257205.bw Bmal1_kd_total_RNA_CT08_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594793 SRX522438 SRR1257206 33911754 33911754 1 FALSE FALSE 33890734 3366571432 NA NA 2014-04-18T19:33:55.593 2015-08-20T01:12:13.327 2015-08-20T01:17:51.760 100 GSM1371424 SRR1257206.bw Bmal1_kd_total_RNA_CT10_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594794 SRX522440 SRR1257208 35514076 35514076 1 FALSE FALSE 35472240 3523901957 NA NA 2014-04-18T19:35:41.330 2015-08-20T01:12:16.187 2015-08-20T01:17:51.350 100 GSM1371426 SRR1257208.bw Bmal1_kd_total_RNA_CT14_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594795 SRX522439 SRR1257207 35895001 35895001 1 FALSE FALSE 35873233 3564719806 NA NA 2014-04-18T19:35:28.540 2015-08-20T01:12:14.937 2015-08-20T01:17:50.980 100 GSM1371425 SRR1257207.bw Bmal1_kd_total_RNA_CT12_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594796 SRX522441 SRR1257209 31629965 31629965 1 FALSE FALSE 31609338 3142290853 NA NA 2014-04-18T19:35:46.650 2015-08-20T01:12:17.277 2015-08-20T01:17:50.617 100 GSM1371427 SRR1257209.bw Bmal1_kd_total_RNA_CT16_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594797 SRX522442 SRR1257210 30516589 30516589 1 FALSE FALSE 30495194 3026108429 NA NA 2014-04-18T19:35:31.117 2015-08-20T01:12:18.957 2015-08-20T01:17:50.287 100 GSM1371428 SRR1257210.bw Bmal1_kd_total_RNA_CT18_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594798 SRX522443 SRR1257211 28513966 28513966 1 FALSE FALSE 28496732 2831510284 NA NA 2014-04-18T19:35:56.843 2015-08-20T01:12:19.813 2015-08-20T01:17:49.977 100 GSM1371429 SRR1257211.bw Bmal1_kd_total_RNA_CT20_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594799 SRX522444 SRR1257212 30146725 30146725 1 FALSE FALSE 30112847 2986481551 NA NA 2014-04-18T19:35:44.010 2015-08-20T01:12:20.787 2015-08-20T01:17:49.690 100 GSM1371430 SRR1257212.bw Bmal1_kd_total_RNA_CT22_rep1 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 1", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594800 SRX522445 SRR1257213 31060141 31060141 1 FALSE FALSE 31041916 3084678952 NA NA 2014-04-18T19:35:49.210 2015-08-20T01:12:21.790 2015-08-20T01:17:49.383 100 GSM1371431 SRR1257213.bw Bmal1_kd_total_RNA_CT00_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594801 SRX522446 SRR1257214 29580447 29580447 1 FALSE FALSE 29561800 2939896267 NA NA 2014-04-18T19:35:59.797 2015-08-20T01:12:23.137 2015-08-20T01:17:49.063 100 GSM1371432 SRR1257214.bw Bmal1_kd_total_RNA_CT02_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594802 SRX522447 SRR1257215 31649121 31649121 1 FALSE FALSE 31620137 3143975811 NA NA 2014-04-18T19:35:51.727 2015-08-20T01:12:24.397 2015-08-20T01:17:48.733 100 GSM1371433 SRR1257215.bw Bmal1_kd_total_RNA_CT04_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594803 SRX522448 SRR1257216 30215340 30215340 1 FALSE FALSE 30194099 2996049425 NA NA 2014-04-18T19:36:02.450 2015-08-20T01:12:25.793 2015-08-20T01:17:48.433 100 GSM1371434 SRR1257216.bw Bmal1_kd_total_RNA_CT06_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594804 SRX522449 SRR1257217 32455195 32455195 1 FALSE FALSE 32434673 3221178172 NA NA 2014-04-18T19:36:05.060 2015-08-20T01:12:26.960 2015-08-20T01:17:48.133 100 GSM1371435 SRR1257217.bw Bmal1_kd_total_RNA_CT08_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594805 SRX522450 SRR1257218 27937381 27937381 1 FALSE FALSE 27919570 2773924797 NA NA 2014-04-18T19:35:54.287 2015-08-20T01:12:27.887 2015-08-20T01:17:47.820 100 GSM1371436 SRR1257218.bw Bmal1_kd_total_RNA_CT10_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594806 SRX522451 SRR1257219 32762674 32762674 1 FALSE FALSE 32741946 3247363835 NA NA 2014-04-18T19:36:15.337 2015-08-20T01:12:28.887 2015-08-20T01:17:47.520 100 GSM1371437 SRR1257219.bw Bmal1_kd_total_RNA_CT12_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594807 SRX522452 SRR1257220 50508007 50508007 1 FALSE FALSE 50477715 4997790263 NA NA 2014-04-18T19:36:12.830 2015-08-20T01:11:28.597 2015-08-20T01:17:47.213 100 GSM1371438 SRR1257220.bw Bmal1_kd_total_RNA_CT14_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594808 SRX522453 SRR1257221 35651925 35651925 1 FALSE FALSE 35627696 3540397846 NA NA 2014-04-18T19:36:07.830 2015-08-20T01:11:29.593 2015-08-20T01:17:46.887 100 GSM1371439 SRR1257221.bw Bmal1_kd_total_RNA_CT16_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594809 SRX522454 SRR1257222 46346587 46346587 1 FALSE FALSE 46317103 4596815627 NA NA 2014-04-18T19:36:17.840 2015-08-20T01:11:30.707 2015-08-20T01:17:46.443 100 GSM1371440 SRR1257222.bw Bmal1_kd_total_RNA_CT18_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594810 SRX522455 SRR1257223 34752119 34752119 1 FALSE FALSE 34728288 3452499942 NA NA 2014-04-18T19:36:23.060 2015-08-20T01:11:32.393 2015-08-20T01:17:46.193 100 GSM1371441 SRR1257223.bw Bmal1_kd_total_RNA_CT20_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA") SRP041298 SRS594811 SRX522456 SRR1257224 38906973 38906973 1 FALSE FALSE 38873757 3861066306 NA NA 2014-04-18T19:36:10.287 2015-08-20T01:11:33.373 2015-08-20T01:17:45.943 100 GSM1371442 SRR1257224.bw Bmal1_kd_total_RNA_CT22_rep2 c("cell type: osteosarcoma", "cell line: U2-OS", "replicate: 2", "sirna treatment: Bmal1 siRNA")