project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP042184 SRS618279 SRX550542 SRR1296031 377891680 363705153 0.962458747438 TRUE FALSE 363567289 36682673568 umbilical cord esc 2014-05-22T11:01:50.380 2014-06-25T01:28:57.233 2014-06-25T01:34:32.047 194 GSM1396605 SRR1296031.bw N-Thy010 c("sample type: Frozen", "who histotype: B3", "Stage: IVA", "age at diagnosis: 55", "Sex: F", "final gtf2i mutation status: WT") SRP042184 SRS618268 SRX550531 SRR1296020 328426594 315304220 0.960044727681 TRUE FALSE 315175005 31798416339 umbilical cord esc 2014-05-22T11:01:48.493 2014-06-25T01:36:49.750 2014-06-25T01:42:18.293 193 GSM1396593 SRR1296020.bw P-Thy019 c("sample type: Frozen", "who histotype: B2", "Stage: IIB", "age at diagnosis: 72", "Sex: F", "final gtf2i mutation status: WT") SRP042184 SRS618269 SRX550532 SRR1296021 280378980 268178565 0.956485985504 TRUE FALSE 268071373 27045811177 umbilical cord esc 2014-05-22T11:01:31.180 2014-06-25T01:36:40.763 2014-06-25T01:42:18.607 193 GSM1396594 SRR1296021.bw P-Thy021 c("sample type: Frozen", "who histotype: A", "Stage: IIB", "age at diagnosis: 53", "Sex: M", "final gtf2i mutation status: MUT") SRP042184 SRS618270 SRX550533 SRR1296022 270813394 258985841 0.95632581969 TRUE FALSE 258902731 26122034185 umbilical cord esc 2014-05-22T11:01:54.187 2014-06-25T01:36:46.863 2014-06-25T01:42:18.903 193 GSM1396595 SRR1296022.bw P-Thy025 c("sample type: Frozen", "who histotype: TC:SCC", "Stage: IVA", "age at diagnosis: 56", "Sex: M", "final gtf2i mutation status: WT") SRP042184 SRS618260 SRX550522 SRR1296023 383314292 365439784 0.953368532369 TRUE FALSE 365259509 36851343887 umbilical cord esc 2014-05-22T11:01:40.787 2014-06-25T01:36:43.830 2014-06-25T01:42:14.840 192 GSM1396597 SRR1296023.bw P-Thy031 c("sample type: Frozen", "who histotype: A", "Stage: IIA", "age at diagnosis: 45", "Sex: M", "final gtf2i mutation status: MUT") SRP042184 SRS618271 SRX550534 SRR1296012 375351540 357799254 0.953237740812 TRUE FALSE 357686736 36083236268 umbilical cord esc 2014-05-22T11:01:42.837 2014-06-25T01:37:03.963 2014-06-25T01:42:19.203 192 GSM1396596 SRR1296012.bw P-Thy027 c("sample type: Frozen", "who histotype: A", "Stage: IIB", "age at diagnosis: 75", "Sex: M", "final gtf2i mutation status: MUT") SRP042184 SRS618273 SRX550536 SRR1296025 275660402 259590552 0.941704177011 TRUE FALSE 259513398 26181125450 umbilical cord esc 2014-05-22T11:01:56.197 2014-06-25T01:37:06.933 2014-06-25T01:42:19.917 190 GSM1396599 SRR1296025.bw P-Thy037 c("sample type: Frozen", "who histotype: A", "Stage: IIA", "age at diagnosis: 74", "Sex: M", "final gtf2i mutation status: MUT") SRP042184 SRS618272 SRX550535 SRR1296024 283305414 263394091 0.929717816829 TRUE FALSE 263216970 26552068977 umbilical cord esc 2014-05-22T11:01:52.247 2014-06-25T01:36:52.580 2014-06-25T01:42:19.553 187 GSM1396598 SRR1296024.bw P-Thy034 c("sample type: Frozen", "who histotype: B2", "Stage: IIB", "age at diagnosis: 60", "Sex: M", "final gtf2i mutation status: WT") SRP042184 SRS618274 SRX550537 SRR1296026 302892968 281313329 0.928754902623 TRUE FALSE 280598712 28309175340 umbilical cord esc 2014-05-22T11:01:58.160 2014-06-25T01:37:01.067 2014-06-25T01:42:20.467 187 GSM1396600 SRR1296026.bw P-Thy041 c("sample type: Frozen", "who histotype: B3", "Stage: IVA", "age at diagnosis: 48", "Sex: F", "final gtf2i mutation status: WT") SRP042184 SRS618276 SRX550539 SRR1296028 331908836 308038935 0.928082960105 TRUE FALSE 307816494 31031123299 umbilical cord esc 2014-05-22T11:01:32.997 2014-06-25T01:37:13.030 2014-06-25T01:42:21.607 187 GSM1396602 SRR1296028.bw N-Thy002 c("sample type: Frozen", "who histotype: TC:SCC", "Stage: IVB", "age at diagnosis: 38", "Sex: M", "final gtf2i mutation status: WT") SRP042184 SRS618265 SRX550528 SRR1296017 62905826 58063415 0.923021263563 TRUE FALSE 58049170 6204290788 umbilical cord esc 2014-05-22T11:01:29.293 2014-06-25T01:36:31.450 2014-06-25T01:42:17.307 197 GSM1396590 SRR1296017.bw P-Thy015 c("sample type: Frozen", "who histotype: B3", "Stage: IVA", "age at diagnosis: 62", "Sex: F", "final gtf2i mutation status: WT") SRP042184 SRS618262 SRX550526 SRR1296015 53563036 49423020 0.922707592602 TRUE FALSE 49416677 5282527608 umbilical cord esc 2014-05-22T11:01:21.343 2014-06-25T01:36:22.120 2014-06-25T01:42:15.860 197 GSM1396588 SRR1296015.bw P-Thy008 c("sample type: Frozen", "who histotype: AB", "Stage: IIA", "age at diagnosis: 52", "Sex: M", "final gtf2i mutation status: MUT") SRP042184 SRS618264 SRX550527 SRR1296016 57547834 53081248 0.922384811216 TRUE FALSE 53065469 5671747333 umbilical cord esc 2014-05-22T11:01:38.933 2014-06-25T01:36:15.940 2014-06-25T01:42:16.893 197 GSM1396589 SRR1296016.bw P-Thy009 c("sample type: Frozen", "who histotype: AB", "Stage: IIA", "age at diagnosis: 60", "Sex: M", "final gtf2i mutation status: MUT") SRP042184 SRS618281 SRX550544 SRR1296033 386592468 355237218 0.918893272385 TRUE FALSE 355072389 35825387490 umbilical cord esc 2014-05-22T11:02:01.947 2014-06-25T01:37:22.700 2014-06-25T01:42:22.737 185 GSM1396607 SRR1296033.bw T1682 c("sample type: Cell Line", "who histotype: B1", "Stage: uk", "final gtf2i mutation status: WT") SRP042184 SRS618263 SRX550525 SRR1296014 53527974 48867950 0.91294226828 TRUE FALSE 48849238 5220204952 umbilical cord esc 2014-05-22T11:01:27.337 2014-06-25T01:36:28.447 2014-06-25T01:42:16.390 195 GSM1396587 SRR1296014.bw P-Thy003 c("sample type: Frozen", "who histotype: TC:SCC", "Stage: III", "age at diagnosis: 76", "Sex: F", "final gtf2i mutation status: WT") SRP042184 SRS618259 SRX550523 SRR1296011 48635082 44337251 0.911631052663 TRUE FALSE 44325710 4736574515 umbilical cord esc 2014-05-22T11:01:25.247 2014-06-25T01:36:19.107 2014-06-25T01:42:14.240 195 GSM1396585 SRR1296011.bw P-Thy001 c("sample type: Frozen", "who histotype: B3", "Stage: IIA", "age at diagnosis: 71", "Sex: F", "final gtf2i mutation status: WT") SRP042184 SRS618277 SRX550540 SRR1296029 13742176 12492118 0.90903493013 TRUE FALSE 12488899 1334515969 umbilical cord esc 2014-05-22T11:01:19.230 2014-06-25T01:37:10.077 2014-06-25T01:42:22.080 194 GSM1396603 SRR1296029.bw N-Thy008 c("sample type: Frozen", "who histotype: B3", "Stage: IVB", "age at diagnosis: 58", "Sex: M", "final gtf2i mutation status: WT") SRP042184 SRS618266 SRX550529 SRR1296018 57211728 51997161 0.908854929185 TRUE FALSE 51987334 5556287340 umbilical cord esc 2014-05-22T11:01:46.683 2014-06-25T01:36:34.760 2014-06-25T01:42:17.620 194 GSM1396591 SRR1296018.bw P-Thy016 c("sample type: Frozen", "who histotype: B2", "Stage: IIA", "age at diagnosis: 37", "Sex: F", "final gtf2i mutation status: WT") SRP042184 SRS618280 SRX550543 SRR1296032 145185842 131472888 0.905548958417 TRUE FALSE 131404280 13121909979 umbilical cord esc 2014-05-22T11:01:44.810 2014-06-25T01:36:57.993 2014-06-25T01:42:22.453 181 GSM1396606 SRR1296032.bw N-Thy011 c("sample type: Frozen", "who histotype: TC: Undiferentiated", "Stage: IVB", "age at diagnosis: 53", "Sex: F", "final gtf2i mutation status: WT") SRP042184 SRS618261 SRX550524 SRR1296013 60017810 54271671 0.904259435658 TRUE FALSE 54257272 5799083615 umbilical cord esc 2014-05-22T11:01:34.887 2014-06-25T01:36:13.230 2014-06-25T01:42:15.430 193 GSM1396586 SRR1296013.bw P-Thy002 c("sample type: Frozen", "who histotype: TC: SCC", "Stage: IIB", "age at diagnosis: 54", "Sex: F", "final gtf2i mutation status: WT") SRP042184 SRS618275 SRX550538 SRR1296027 49156766 44431570 0.903874961994 TRUE FALSE 44421696 4745905883 umbilical cord esc 2014-05-22T11:01:23.287 2014-06-25T01:36:55.393 2014-06-25T01:42:21.057 193 GSM1396601 SRR1296027.bw N-Thy001 c("sample type: Frozen", "who histotype: TC:SCC", "Stage: IVB", "age at diagnosis: 62", "Sex: M", "final gtf2i mutation status: WT") SRP042184 SRS618278 SRX550541 SRR1296030 115807758 104665861 0.903789718475 TRUE FALSE 104592119 10442921398 umbilical cord esc 2014-05-22T11:02:00.050 2014-06-25T01:28:26.450 2014-06-25T01:34:31.700 180 GSM1396604 SRR1296030.bw N-Thy009 c("sample type: Frozen", "who histotype: TC: Undiferentiated", "Stage: IVB", "age at diagnosis: 46", "Sex: M", "final gtf2i mutation status: WT") SRP042184 SRS618282 SRX550545 SRR1296034 29446646 25294865 0.859006659027 TRUE FALSE 25254736 2015923930 umbilical cord esc 2014-05-22T11:02:04.203 2014-06-25T01:37:19.380 2014-06-25T01:42:23.043 137 GSM1396608 SRR1296034.bw T1889 c("sample type: Cell Line", "who histotype: TC: SCC", "Stage: uk", "final gtf2i mutation status: WT") SRP042184 SRS618267 SRX550530 SRR1296019 255569656 217305193 0.850277753631 TRUE FALSE 216377386 21828761863 umbilical cord esc 2014-05-22T11:01:36.957 2014-06-25T01:36:37.907 2014-06-25T01:42:17.973 171 GSM1396592 SRR1296019.bw P-Thy018 c("sample type: Frozen", "who histotype: A", "Stage: IIA", "age at diagnosis: 41", "Sex: F", "final gtf2i mutation status: MUT") SRP042184 SRS618283 SRX550546 SRR1296035 90320956 73235333 0.810834342807 TRUE FALSE 73050318 5884237875 umbilical cord esc 2014-05-22T11:02:06.350 2014-06-25T01:37:16.340 2014-06-25T01:42:23.647 130 GSM1396609 SRR1296035.bw TY82 c("sample type: Cell Line", "who histotype: TC: Undifferentiated", "Stage: uk", "final gtf2i mutation status: WT")