project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP042186 SRS618290 SRX550549 SRR1296118 68299622 68299622 1 TRUE FALSE 68048667 3460991758 NA NA 2014-05-22T11:52:26.477 2014-11-01T01:21:36.197 2014-11-01T01:26:30.413 102 GSM1396721 SRR1296118.bw WAT_DMSO_24_hours_TTB01 c("cell type: WAT", "treatment: DMSO", "time: 24 hours", "replicate: 1", "librarybatch: A", "lane: 2", "multiplex: 1") SRP042186 SRS618292 SRX550551 SRR1296120 107791316 107791316 1 TRUE FALSE 107388999 5461490301 NA NA 2014-05-22T11:52:32.453 2014-11-01T01:13:31.280 2014-11-01T01:18:26.163 102 GSM1396723 SRR1296120.bw WAT_DMSO_24_hours_TTB03 c("cell type: WAT", "treatment: DMSO", "time: 24 hours", "replicate: 3", "librarybatch: A", "lane: 4", "multiplex: 3") SRP042186 SRS618293 SRX550552 SRR1296121 84624870 84624870 1 TRUE FALSE 84351727 4290285904 NA NA 2014-05-22T11:52:22.647 2014-11-01T01:17:11.353 2014-11-01T01:22:24.320 102 GSM1396724 SRR1296121.bw WAT_JAK3i_24_hours_TTB04 c("cell type: WAT", "treatment: JAK3i", "time: 24 hours", "replicate: 1", "librarybatch: A", "lane: 3", "multiplex: 1") SRP042186 SRS618294 SRX550553 SRR1296122 74045702 74045702 1 TRUE FALSE 73780027 3752705782 NA NA 2014-05-22T11:52:52.333 2014-11-01T01:22:16.380 2014-11-01T01:26:30.737 102 GSM1396725 SRR1296122.bw WAT_JAK3i_24_hours_TTB05 c("cell type: WAT", "treatment: JAK3i", "time: 24 hours", "replicate: 2", "librarybatch: A", "lane: 2", "multiplex: 3") SRP042186 SRS618295 SRX550554 SRR1296123 62885946 62885946 1 TRUE FALSE 62650356 3186679517 NA NA 2014-05-22T11:52:44.590 2014-11-01T01:15:57.720 2014-11-01T01:18:26.553 102 GSM1396726 SRR1296123.bw WAT_JAK3i_24_hours_TTB06 c("cell type: WAT", "treatment: JAK3i", "time: 24 hours", "replicate: 3", "librarybatch: A", "lane: 1", "multiplex: 4") SRP042186 SRS618296 SRX550555 SRR1296124 64818862 64818862 1 TRUE FALSE 64582414 3284587204 NA NA 2014-05-22T11:52:24.533 2014-11-01T01:14:05.537 2014-11-01T01:18:26.903 102 GSM1396727 SRR1296124.bw WAT_SYKi_24_hours_TTB07 c("cell type: WAT", "treatment: SYKi", "time: 24 hours", "replicate: 1", "librarybatch: A", "lane: 1", "multiplex: 1") SRP042186 SRS618297 SRX550557 SRR1296126 68715204 68715204 1 TRUE FALSE 68450394 3481566061 NA NA 2014-05-22T11:52:38.650 2014-11-01T01:21:54.420 2014-11-01T01:26:31.057 102 GSM1396729 SRR1296126.bw WAT_SYKi_24_hours_TTB09 c("cell type: WAT", "treatment: SYKi", "time: 24 hours", "replicate: 3", "librarybatch: A", "lane: 3", "multiplex: 3") SRP042186 SRS618298 SRX550556 SRR1296125 93140040 93140040 1 TRUE FALSE 92796242 4719433642 NA NA 2014-05-22T11:52:20.667 2014-11-01T01:27:57.130 2014-11-01T01:30:20.503 102 GSM1396728 SRR1296125.bw WAT_SYKi_24_hours_TTB08 c("cell type: WAT", "treatment: SYKi", "time: 24 hours", "replicate: 2", "librarybatch: A", "lane: 4", "multiplex: 2") SRP042186 SRS618300 SRX550559 SRR1296128 100697468 100697468 1 TRUE FALSE 100420754 5106944900 NA NA 2014-05-22T11:52:36.640 2014-11-01T01:22:30.337 2014-11-01T01:26:32.353 102 GSM1396731 SRR1296128.bw MPC_DMSO_24_hours_TTB11 c("cell type: MPC", "treatment: DMSO", "time: 24 hours", "replicate: 2", "librarybatch: A", "lane: 3", "multiplex: 4") SRP042186 SRS618301 SRX550561 SRR1296130 131410516 131410516 1 TRUE FALSE 131001444 6663105618 NA NA 2014-05-22T11:52:34.500 2014-11-01T01:25:54.877 2014-11-01T01:30:21.170 102 GSM1396733 SRR1296130.bw BAT_DMSO_24_hours_TTB13 c("cell type: BAT", "treatment: DMSO", "time: 24 hours", "replicate: 1", "librarybatch: A", "lane: 4", "multiplex: 1") SRP042186 SRS618302 SRX550560 SRR1296129 96212016 96212016 1 TRUE FALSE 95950794 4879567989 NA NA 2014-05-22T11:52:46.503 2014-11-01T01:19:57.030 2014-11-01T01:22:24.623 102 GSM1396732 SRR1296129.bw MPC_DMSO_24_hours_TTB12 c("cell type: MPC", "treatment: DMSO", "time: 24 hours", "replicate: 3", "librarybatch: A", "lane: 2", "multiplex: 2") SRP042186 SRS618303 SRX550562 SRR1296131 104086586 104086586 1 TRUE FALSE 103777345 5277687373 NA NA 2014-05-22T11:52:48.600 2014-11-01T01:20:13.190 2014-11-01T01:22:24.940 102 GSM1396734 SRR1296131.bw BAT_DMSO_24_hours_TTB14 c("cell type: BAT", "treatment: DMSO", "time: 24 hours", "replicate: 2", "librarybatch: A", "lane: 2", "multiplex: 4") SRP042186 SRS618304 SRX550563 SRR1296132 69630328 69630328 1 TRUE FALSE 69411174 3530208474 NA NA 2014-05-22T11:52:42.700 2014-11-01T01:18:08.843 2014-11-01T01:22:25.293 102 GSM1396735 SRR1296132.bw BAT_DMSO_24_hours_TTB15 c("cell type: BAT", "treatment: DMSO", "time: 24 hours", "replicate: 3", "librarybatch: A", "lane: 1", "multiplex: 2") SRP042186 SRS618305 SRX550564 SRR1296133 107463378 107463378 1 TRUE FALSE 107047317 5440528089 NA NA 2014-05-22T11:52:40.690 2014-11-01T01:14:46.303 2014-11-01T01:18:27.360 102 GSM1396736 SRR1296133.bw WAT_DMSO_day_7_TTB16 c("cell type: WAT", "treatment: DMSO", "time: 7 days", "replicate: 1", "librarybatch: B", "lane: 8", "multiplex: 1") SRP042186 SRS618306 SRX550565 SRR1296134 71199514 71199514 1 TRUE FALSE 70915722 3604396922 NA NA 2014-05-22T11:52:56.100 2014-11-01T01:19:48.163 2014-11-01T01:22:25.607 102 GSM1396737 SRR1296134.bw WAT_DMSO_day_7_TTB17 c("cell type: WAT", "treatment: DMSO", "time: 7 days", "replicate: 2", "librarybatch: B", "lane: 6", "multiplex: 4") SRP042186 SRS618307 SRX550566 SRR1296135 72923672 72923672 1 TRUE FALSE 72648573 3692625156 NA NA 2014-05-22T11:52:50.470 2014-11-01T01:26:45.877 2014-11-01T01:30:21.400 102 GSM1396738 SRR1296135.bw WAT_DMSO_day_7_TTB18 c("cell type: WAT", "treatment: DMSO", "time: 7 days", "replicate: 3", "librarybatch: B", "lane: 7", "multiplex: 2") SRP042186 SRS618308 SRX550567 SRR1296136 89568168 89568168 1 TRUE FALSE 89263051 4537531302 NA NA 2014-05-22T11:52:54.170 2014-11-01T01:14:23.923 2014-11-01T01:18:27.790 102 GSM1396739 SRR1296136.bw WAT_JAK3i_day_7_TTB19 c("cell type: WAT", "treatment: JAK3i", "time: 7 days", "replicate: 1", "librarybatch: B", "lane: 5", "multiplex: 3") SRP042186 SRS618309 SRX550568 SRR1296137 85857616 85857616 1 TRUE FALSE 85562566 4349933111 NA NA 2014-05-22T11:53:00.387 2014-11-01T01:28:01.620 2014-11-01T01:30:21.840 102 GSM1396740 SRR1296137.bw WAT_JAK3i_day_7_TTB20 c("cell type: WAT", "treatment: JAK3i", "time: 7 days", "replicate: 2", "librarybatch: B", "lane: 7", "multiplex: 1") SRP042186 SRS618310 SRX550569 SRR1296138 84354076 84354076 1 TRUE FALSE 84049684 4272320322 NA NA 2014-05-22T11:52:58.097 2014-11-01T01:14:49.430 2014-11-01T01:18:28.103 102 GSM1396741 SRR1296138.bw WAT_JAK3i_day_7_TTB12 c("cell type: WAT", "treatment: JAK3i", "time: 7 days", "replicate: 3", "librarybatch: B", "lane: 6", "multiplex: 2") SRP042186 SRS618311 SRX550570 SRR1296139 73842506 73842506 1 TRUE FALSE 73546393 3738453285 NA NA 2014-05-22T11:53:04.007 2014-11-01T01:27:35.987 2014-11-01T01:30:22.067 102 GSM1396742 SRR1296139.bw WAT_SYKi_day_7_TTB22 c("cell type: WAT", "treatment: SYKi", "time: 7 days", "replicate: 1", "librarybatch: B", "lane: 7", "multiplex: 4") SRP042186 SRS618312 SRX550571 SRR1296140 107389926 107389926 1 TRUE FALSE 106961378 5437399789 NA NA 2014-05-22T11:53:10.170 2014-11-01T01:20:20.000 2014-11-01T01:22:26.160 102 GSM1396743 SRR1296140.bw WAT_SYKi_day_7_TTB23 c("cell type: WAT", "treatment: SYKi", "time: 7 days", "replicate: 2", "librarybatch: B", "lane: 8", "multiplex: 3") SRP042186 SRS618313 SRX550572 SRR1296141 60096540 60096540 1 TRUE FALSE 59870333 3043754867 NA NA 2014-05-22T11:53:02.173 2014-11-01T01:23:00.513 2014-11-01T01:26:32.670 102 GSM1396744 SRR1296141.bw WAT_SYKi_day_7_TTB24 c("cell type: WAT", "treatment: SYKi", "time: 7 days", "replicate: 3", "librarybatch: B", "lane: 5", "multiplex: 1") SRP042186 SRS618314 SRX550573 SRR1296142 79991772 79991772 1 TRUE FALSE 79772497 4054813606 NA NA 2014-05-22T11:53:06.090 2014-11-01T01:13:42.807 2014-11-01T01:18:28.397 102 GSM1396745 SRR1296142.bw MPC_DMSO_day_7_TTB25 c("cell type: MPC", "treatment: DMSO", "time: 7 days", "replicate: 1", "librarybatch: B", "lane: 6", "multiplex: 1") SRP042186 SRS618315 SRX550574 SRR1296143 75452540 75452540 1 TRUE FALSE 75228649 3823681537 NA NA 2014-05-22T11:53:08.007 2014-11-01T01:19:40.577 2014-11-01T01:22:26.670 102 GSM1396746 SRR1296143.bw MPC_DMSO_day_7_TTB26 c("cell type: MPC", "treatment: DMSO", "time: 7 days", "replicate: 2", "librarybatch: B", "lane: 5", "multiplex: 2") SRP042186 SRS618316 SRX550575 SRR1296144 88092764 88092764 1 TRUE FALSE 87833572 4464592544 NA NA 2014-05-22T11:53:16.313 2014-11-01T01:16:10.827 2014-11-01T01:18:28.777 102 GSM1396747 SRR1296144.bw MPC_DMSO_day_7_TTB27 c("cell type: MPC", "treatment: DMSO", "time: 7 days", "replicate: 3", "librarybatch: B", "lane: 7", "multiplex: 3") SRP042186 SRS618317 SRX550576 SRR1296145 84402772 84402772 1 TRUE FALSE 84098950 4276902688 NA NA 2014-05-22T11:53:12.190 2014-11-01T01:24:40.220 2014-11-01T01:26:33.413 102 GSM1396748 SRR1296145.bw BAT_DMSO_day_7_TTB28 c("cell type: BAT", "treatment: DMSO", "time: 7 days", "replicate: 1", "librarybatch: B", "lane: 6", "multiplex: 3") SRP042186 SRS618318 SRX550577 SRR1296146 79588282 79588282 1 TRUE FALSE 79326062 4032532044 NA NA 2014-05-22T11:53:18.200 2014-11-01T01:15:41.520 2014-11-01T01:18:29.287 102 GSM1396749 SRR1296146.bw BAT_DMSO_day_7_TTB29 c("cell type: BAT", "treatment: DMSO", "time: 7 days", "replicate: 2", "librarybatch: B", "lane: 5", "multiplex: 4") SRP042186 SRS618319 SRX550578 SRR1296147 113816696 113816696 1 TRUE FALSE 113430911 5766417963 NA NA 2014-05-22T11:53:14.220 2014-11-01T01:21:12.923 2014-11-01T01:26:33.727 102 GSM1396750 SRR1296147.bw BAT_DMSO_day_7_TTB30 c("cell type: BAT", "treatment: DMSO", "time: 7 days", "replicate: 3", "librarybatch: B", "lane: 8", "multiplex: 2") SRP042186 SRS618291 SRX550550 SRR1296119 76524202 0 0 TRUE FALSE 0 NA NA NA 2014-05-22T11:52:30.550 2014-11-01T01:17:42.493 2014-11-01T01:22:24.000 102 GSM1396722 NA WAT_DMSO_24_hours_TTB02 c("cell type: WAT", "treatment: DMSO", "time: 24 hours", "replicate: 2", "librarybatch: A", "lane: 3", "multiplex: 2") SRP042186 SRS618299 SRX550558 SRR1296127 79372060 0 0 TRUE FALSE 0 NA NA NA 2014-05-22T11:52:28.613 2014-11-01T01:23:48.460 2014-11-01T01:26:31.690 102 GSM1396730 NA MPC_DMSO_24_hours_TTB10 c("cell type: MPC", "treatment: DMSO", "time: 24 hours", "replicate: 1", "librarybatch: A", "lane: 1", "multiplex: 3")