project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP042249 SRS620352 SRX553011 SRR1298939 6755506 6755506 1 FALSE FALSE 6648176 337096297 NA NA 2014-05-25T21:41:23.287 2016-01-26T01:14:13.367 2016-01-26T01:18:15.850 51 GSM1398731 SRR1298939.bw 2D.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: 2D") SRP042249 SRS620352 SRX553011 SRR1298940 6601298 6601298 1 FALSE FALSE 6500345 329609769 NA NA 2014-05-25T21:41:23.287 2016-01-26T01:14:13.367 2016-01-26T01:18:15.850 51 GSM1398731 SRR1298940.bw 2D.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: 2D") SRP042249 SRS620352 SRX553011 SRR1298941 6565815 6565815 1 FALSE FALSE 6464483 327796811 NA NA 2014-05-25T21:41:23.287 2016-01-26T01:14:13.367 2016-01-26T01:18:15.850 51 GSM1398731 SRR1298941.bw 2D.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: 2D") SRP042249 SRS620353 SRX553012 SRR1298942 7106425 7106425 1 FALSE FALSE 7010699 355573659 NA NA 2014-05-25T21:41:11.053 2016-01-26T01:14:16.307 2016-01-26T01:18:15.643 51 GSM1398732 SRR1298942.bw 2D.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: 2D") SRP042249 SRS620353 SRX553012 SRR1298943 6936504 6936504 1 FALSE FALSE 6847452 347303605 NA NA 2014-05-25T21:41:11.053 2016-01-26T01:14:16.307 2016-01-26T01:18:15.643 51 GSM1398732 SRR1298943.bw 2D.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: 2D") SRP042249 SRS620353 SRX553012 SRR1298944 6912140 6912140 1 FALSE FALSE 6821979 346050333 NA NA 2014-05-25T21:41:11.053 2016-01-26T01:14:16.307 2016-01-26T01:18:15.643 51 GSM1398732 SRR1298944.bw 2D.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: 2D") SRP042249 SRS620354 SRX553013 SRR1298945 6964527 6964527 1 FALSE FALSE 6829978 346405054 NA NA 2014-05-25T21:41:17.443 2016-01-26T01:14:17.157 2016-01-26T01:18:15.407 51 GSM1398733 SRR1298945.bw 2D.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: 2D") SRP042249 SRS620354 SRX553013 SRR1298946 6799892 6799892 1 FALSE FALSE 6672236 338386814 NA NA 2014-05-25T21:41:17.443 2016-01-26T01:14:17.157 2016-01-26T01:18:15.407 51 GSM1398733 SRR1298946.bw 2D.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: 2D") SRP042249 SRS620354 SRX553013 SRR1298947 6769351 6769351 1 FALSE FALSE 6642009 336872080 NA NA 2014-05-25T21:41:17.443 2016-01-26T01:14:17.157 2016-01-26T01:18:15.407 51 GSM1398733 SRR1298947.bw 2D.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: 2D") SRP042249 SRS620355 SRX553014 SRR1298948 7181875 7181875 1 FALSE FALSE 7063072 358155001 NA NA 2014-05-25T21:41:40.250 2016-01-26T01:14:17.927 2016-01-26T01:18:15.153 51 GSM1398734 SRR1298948.bw Perf.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Perfusion 3D") SRP042249 SRS620355 SRX553014 SRR1298949 7009845 7009845 1 FALSE FALSE 6898469 349816461 NA NA 2014-05-25T21:41:40.250 2016-01-26T01:14:17.927 2016-01-26T01:18:15.153 51 GSM1398734 SRR1298949.bw Perf.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Perfusion 3D") SRP042249 SRS620355 SRX553014 SRR1298950 6974936 6974936 1 FALSE FALSE 6862755 348011375 NA NA 2014-05-25T21:41:40.250 2016-01-26T01:14:17.927 2016-01-26T01:18:15.153 51 GSM1398734 SRR1298950.bw Perf.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Perfusion 3D") SRP042249 SRS620356 SRX553015 SRR1298951 7098359 7098359 1 FALSE FALSE 7004436 355221123 NA NA 2014-05-25T21:41:38.270 2016-01-26T01:14:18.807 2016-01-26T01:18:14.950 51 GSM1398735 SRR1298951.bw Perf.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Perfusion 3D") SRP042249 SRS620356 SRX553015 SRR1298952 6930596 6930596 1 FALSE FALSE 6841303 346953584 NA NA 2014-05-25T21:41:38.270 2016-01-26T01:14:18.807 2016-01-26T01:18:14.950 51 GSM1398735 SRR1298952.bw Perf.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Perfusion 3D") SRP042249 SRS620356 SRX553015 SRR1298953 6904512 6904512 1 FALSE FALSE 6815531 345646297 NA NA 2014-05-25T21:41:38.270 2016-01-26T01:14:18.807 2016-01-26T01:18:14.950 51 GSM1398735 SRR1298953.bw Perf.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Perfusion 3D") SRP042249 SRS620357 SRX553016 SRR1298954 8003783 8003783 1 FALSE FALSE 7843095 397570086 NA NA 2014-05-25T21:41:15.370 2016-01-26T01:14:20.267 2016-01-26T01:18:14.750 51 GSM1398736 SRR1298954.bw Perf.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Perfusion 3D") SRP042249 SRS620357 SRX553016 SRR1298955 7811676 7811676 1 FALSE FALSE 7658159 388189174 NA NA 2014-05-25T21:41:15.370 2016-01-26T01:14:20.267 2016-01-26T01:18:14.750 51 GSM1398736 SRR1298955.bw Perf.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Perfusion 3D") SRP042249 SRS620357 SRX553016 SRR1298956 7777459 7777459 1 FALSE FALSE 7623810 386470797 NA NA 2014-05-25T21:41:15.370 2016-01-26T01:14:20.267 2016-01-26T01:18:14.750 51 GSM1398736 SRR1298956.bw Perf.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Perfusion 3D") SRP042249 SRS620358 SRX553017 SRR1298957 6349567 6349567 1 FALSE FALSE 6249149 316905800 NA NA 2014-05-25T21:41:25.490 2016-01-26T01:14:21.937 2016-01-26T01:18:14.490 51 GSM1398737 SRR1298957.bw Stat.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Static 3D") SRP042249 SRS620358 SRX553017 SRR1298958 6195973 6195973 1 FALSE FALSE 6100809 309382588 NA NA 2014-05-25T21:41:25.490 2016-01-26T01:14:21.937 2016-01-26T01:18:14.490 51 GSM1398737 SRR1298958.bw Stat.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Static 3D") SRP042249 SRS620358 SRX553017 SRR1298959 6172292 6172292 1 FALSE FALSE 6076626 308171936 NA NA 2014-05-25T21:41:25.490 2016-01-26T01:14:21.937 2016-01-26T01:18:14.490 51 GSM1398737 SRR1298959.bw Stat.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Static 3D") SRP042249 SRS620359 SRX553018 SRR1298960 7194969 7194969 1 FALSE FALSE 7083247 359179936 NA NA 2014-05-25T21:41:21.253 2016-01-26T01:14:24.867 2016-01-26T01:18:14.280 51 GSM1398738 SRR1298960.bw Stat.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Static 3D") SRP042249 SRS620359 SRX553018 SRR1298961 7019450 7019450 1 FALSE FALSE 6914871 350619132 NA NA 2014-05-25T21:41:21.253 2016-01-26T01:14:24.867 2016-01-26T01:18:14.280 51 GSM1398738 SRR1298961.bw Stat.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Static 3D") SRP042249 SRS620359 SRX553018 SRR1298962 6994104 6994104 1 FALSE FALSE 6889977 349354627 NA NA 2014-05-25T21:41:21.253 2016-01-26T01:14:24.867 2016-01-26T01:18:14.280 51 GSM1398738 SRR1298962.bw Stat.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Static 3D") SRP042249 SRS620360 SRX553019 SRR1298963 6862947 6862947 1 FALSE FALSE 6540526 331542554 NA NA 2014-05-25T21:41:19.440 2016-01-26T01:14:27.237 2016-01-26T01:18:14.067 51 GSM1398739 SRR1298963.bw Stat.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Static 3D") SRP042249 SRS620360 SRX553019 SRR1298964 6697918 6697918 1 FALSE FALSE 6384571 323647861 NA NA 2014-05-25T21:41:19.440 2016-01-26T01:14:27.237 2016-01-26T01:18:14.067 51 GSM1398739 SRR1298964.bw Stat.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Static 3D") SRP042249 SRS620360 SRX553019 SRR1298965 6669647 6669647 1 FALSE FALSE 6358513 322339068 NA NA 2014-05-25T21:41:19.440 2016-01-26T01:14:27.237 2016-01-26T01:18:14.067 51 GSM1398739 SRR1298965.bw Stat.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: Static 3D") SRP042249 SRS620361 SRX553020 SRR1298966 7231092 7231092 1 FALSE FALSE 6633663 334163604 NA NA 2014-05-25T21:41:27.613 2016-01-26T01:14:28.527 2016-01-26T01:18:13.837 51 GSM1398740 SRR1298966.bw XENO.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: xenograft") SRP042249 SRS620361 SRX553020 SRR1298967 7060533 7060533 1 FALSE FALSE 6487261 326612873 NA NA 2014-05-25T21:41:27.613 2016-01-26T01:14:28.527 2016-01-26T01:18:13.837 51 GSM1398740 SRR1298967.bw XENO.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: xenograft") SRP042249 SRS620361 SRX553020 SRR1298968 7029135 7029135 1 FALSE FALSE 6459741 325231896 NA NA 2014-05-25T21:41:27.613 2016-01-26T01:14:28.527 2016-01-26T01:18:13.837 51 GSM1398740 SRR1298968.bw XENO.1 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: xenograft") SRP042249 SRS620362 SRX553021 SRR1298969 6566949 6566949 1 FALSE FALSE 5709789 285698786 NA NA 2014-05-25T21:41:08.867 2016-01-26T01:12:14.557 2016-01-26T01:14:23.907 51 GSM1398741 SRR1298969.bw XENO.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: xenograft") SRP042249 SRS620362 SRX553021 SRR1298970 6429325 6429325 1 FALSE FALSE 5586729 279676217 NA NA 2014-05-25T21:41:08.867 2016-01-26T01:12:14.557 2016-01-26T01:14:23.907 51 GSM1398741 SRR1298970.bw XENO.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: xenograft") SRP042249 SRS620362 SRX553021 SRR1298971 6402189 6402189 1 FALSE FALSE 5562807 278456378 NA NA 2014-05-25T21:41:08.867 2016-01-26T01:12:14.557 2016-01-26T01:14:23.907 51 GSM1398741 SRR1298971.bw XENO.2 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: xenograft") SRP042249 SRS620363 SRX553022 SRR1298972 6661035 6661035 1 FALSE FALSE 5964989 299531003 NA NA 2014-05-25T21:41:13.003 2016-01-26T01:12:19.233 2016-01-26T01:14:23.693 51 GSM1398742 SRR1298972.bw XENO.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: xenograft") SRP042249 SRS620363 SRX553022 SRR1298973 6514987 6514987 1 FALSE FALSE 5837841 293118020 NA NA 2014-05-25T21:41:13.003 2016-01-26T01:12:19.233 2016-01-26T01:14:23.693 51 GSM1398742 SRR1298973.bw XENO.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: xenograft") SRP042249 SRS620363 SRX553022 SRR1298974 6485799 6485799 1 FALSE FALSE 5811459 291813905 NA NA 2014-05-25T21:41:13.003 2016-01-26T01:12:19.233 2016-01-26T01:14:23.693 51 GSM1398742 SRR1298974.bw XENO.3 c("cell line: HT-29", "cell type: colorectal cell line", "culture conditions: xenograft")