project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP042286 SRS620748 SRX553456 SRR1299439 69552702 69552702 1 TRUE FALSE 69349603 3451954991 NA NA 2014-05-27T10:52:42.670 2014-08-19T01:15:41.337 2014-08-19T01:18:24.407 100 GSM1399181 SRR1299439.bw Human whole thymus extract_2 tissue: thymus SRP042286 SRS620748 SRX553456 SRR1299440 69861982 69861982 1 TRUE FALSE 69660478 3467787843 NA NA 2014-05-27T10:52:42.670 2014-08-19T01:15:41.337 2014-08-19T01:18:24.407 100 GSM1399181 SRR1299440.bw Human whole thymus extract_2 tissue: thymus SRP042286 SRS620748 SRX553456 SRR1299441 62477640 62477640 1 TRUE FALSE 62313865 3102080452 NA NA 2014-05-27T10:52:42.670 2014-08-19T01:15:41.337 2014-08-19T01:18:24.407 100 GSM1399181 SRR1299441.bw Human whole thymus extract_2 tissue: thymus SRP042286 SRS620749 SRX553455 SRR1299438 72505468 72505468 1 TRUE FALSE 71793076 3569167016 NA NA 2014-05-27T10:52:57.350 2014-08-19T01:15:38.643 2014-08-19T01:18:24.707 100 GSM1399180 SRR1299438.bw Human whole thymus extract_1 tissue: thymus SRP042286 SRS620749 SRX553455 SRR1299520 72783900 72783900 1 TRUE FALSE 72070789 3583198540 NA NA 2014-05-27T10:52:57.350 2014-08-19T01:15:38.643 2014-08-19T01:18:24.707 100 GSM1399180 SRR1299520.bw Human whole thymus extract_1 tissue: thymus SRP042286 SRS620749 SRX553455 SRR1299521 65273152 65273152 1 TRUE FALSE 64652081 3214538345 NA NA 2014-05-27T10:52:57.350 2014-08-19T01:15:38.643 2014-08-19T01:18:24.707 100 GSM1399180 SRR1299521.bw Human whole thymus extract_1 tissue: thymus SRP042286 SRS620750 SRX553457 SRR1299442 44524546 44524546 1 TRUE FALSE 44381354 2208359213 NA NA 2014-05-27T10:52:47.360 2014-08-19T01:15:44.060 2014-08-19T01:18:24.973 100 GSM1399182 SRR1299442.bw Primary T-ALL sample_1 cell type: human primary T-ALL SRP042286 SRS620750 SRX553457 SRR1299443 44631262 44631262 1 TRUE FALSE 44489518 2213894347 NA NA 2014-05-27T10:52:47.360 2014-08-19T01:15:44.060 2014-08-19T01:18:24.973 100 GSM1399182 SRR1299443.bw Primary T-ALL sample_1 cell type: human primary T-ALL SRP042286 SRS620750 SRX553457 SRR1299444 39298176 39298176 1 TRUE FALSE 39171978 1949246175 NA NA 2014-05-27T10:52:47.360 2014-08-19T01:15:44.060 2014-08-19T01:18:24.973 100 GSM1399182 SRR1299444.bw Primary T-ALL sample_1 cell type: human primary T-ALL SRP042286 SRS620751 SRX553459 SRR1299448 41661140 41661140 1 TRUE FALSE 41278867 2051268877 NA NA 2014-05-27T10:53:07.780 2014-08-19T01:15:49.370 2014-08-19T01:18:25.347 100 GSM1399184 SRR1299448.bw Primary T-ALL sample_3 cell type: human primary T-ALL SRP042286 SRS620751 SRX553459 SRR1299449 41785298 41785298 1 TRUE FALSE 41402986 2057461511 NA NA 2014-05-27T10:53:07.780 2014-08-19T01:15:49.370 2014-08-19T01:18:25.347 100 GSM1399184 SRR1299449.bw Primary T-ALL sample_3 cell type: human primary T-ALL SRP042286 SRS620751 SRX553459 SRR1299450 36755934 36755934 1 TRUE FALSE 36419983 1809890995 NA NA 2014-05-27T10:53:07.780 2014-08-19T01:15:49.370 2014-08-19T01:18:25.347 100 GSM1399184 SRR1299450.bw Primary T-ALL sample_3 cell type: human primary T-ALL SRP042286 SRS620752 SRX553458 SRR1299445 38875774 38875774 1 TRUE FALSE 38723468 1921010046 NA NA 2014-05-27T10:52:49.470 2014-08-19T01:15:46.817 2014-08-19T01:18:25.750 100 GSM1399183 SRR1299445.bw Primary T-ALL sample_2 cell type: human primary T-ALL SRP042286 SRS620752 SRX553458 SRR1299446 38990652 38990652 1 TRUE FALSE 38838793 1926793141 NA NA 2014-05-27T10:52:49.470 2014-08-19T01:15:46.817 2014-08-19T01:18:25.750 100 GSM1399183 SRR1299446.bw Primary T-ALL sample_2 cell type: human primary T-ALL SRP042286 SRS620752 SRX553458 SRR1299447 34337450 34337450 1 TRUE FALSE 34202309 1696653599 NA NA 2014-05-27T10:52:49.470 2014-08-19T01:15:46.817 2014-08-19T01:18:25.750 100 GSM1399183 SRR1299447.bw Primary T-ALL sample_2 cell type: human primary T-ALL SRP042286 SRS620753 SRX553460 SRR1299451 42543602 42543602 1 TRUE FALSE 42352368 2106607497 NA NA 2014-05-27T10:52:51.370 2014-08-19T01:15:51.937 2014-08-19T01:18:26.043 100 GSM1399185 SRR1299451.bw Primary T-ALL sample_4 cell type: human primary T-ALL SRP042286 SRS620753 SRX553460 SRR1299452 42659000 42659000 1 TRUE FALSE 42469567 2112503745 NA NA 2014-05-27T10:52:51.370 2014-08-19T01:15:51.937 2014-08-19T01:18:26.043 100 GSM1399185 SRR1299452.bw Primary T-ALL sample_4 cell type: human primary T-ALL SRP042286 SRS620753 SRX553460 SRR1299453 37615220 37615220 1 TRUE FALSE 37447783 1862755434 NA NA 2014-05-27T10:52:51.370 2014-08-19T01:15:51.937 2014-08-19T01:18:26.043 100 GSM1399185 SRR1299453.bw Primary T-ALL sample_4 cell type: human primary T-ALL SRP042286 SRS620754 SRX553461 SRR1299454 41588266 41588266 1 TRUE FALSE 41329338 2043928788 NA NA 2014-05-27T10:52:53.357 2014-08-19T01:15:54.453 2014-08-19T01:18:26.363 100 GSM1399186 SRR1299454.bw Primary T-ALL sample_5 cell type: human primary T-ALL SRP042286 SRS620754 SRX553461 SRR1299455 41712094 41712094 1 TRUE FALSE 41453799 2050305690 NA NA 2014-05-27T10:52:53.357 2014-08-19T01:15:54.453 2014-08-19T01:18:26.363 100 GSM1399186 SRR1299455.bw Primary T-ALL sample_5 cell type: human primary T-ALL SRP042286 SRS620754 SRX553461 SRR1299456 36628566 36628566 1 TRUE FALSE 36399072 1800228638 NA NA 2014-05-27T10:52:53.357 2014-08-19T01:15:54.453 2014-08-19T01:18:26.363 100 GSM1399186 SRR1299456.bw Primary T-ALL sample_5 cell type: human primary T-ALL SRP042286 SRS620755 SRX553462 SRR1299457 38489674 38489674 1 TRUE FALSE 38284834 1897229614 NA NA 2014-05-27T10:53:11.950 2014-08-19T01:15:57.227 2014-08-19T01:18:26.697 100 GSM1399187 SRR1299457.bw Primary T-ALL sample_6 cell type: human primary T-ALL SRP042286 SRS620755 SRX553462 SRR1299458 38597762 38597762 1 TRUE FALSE 38392855 1902793010 NA NA 2014-05-27T10:53:11.950 2014-08-19T01:15:57.227 2014-08-19T01:18:26.697 100 GSM1399187 SRR1299458.bw Primary T-ALL sample_6 cell type: human primary T-ALL SRP042286 SRS620755 SRX553462 SRR1299459 33951816 33951816 1 TRUE FALSE 33770906 1673589537 NA NA 2014-05-27T10:53:11.950 2014-08-19T01:15:57.227 2014-08-19T01:18:26.697 100 GSM1399187 SRR1299459.bw Primary T-ALL sample_6 cell type: human primary T-ALL SRP042286 SRS620756 SRX553464 SRR1299463 36719952 36719952 1 TRUE FALSE 36573084 1817747730 NA NA 2014-05-27T10:53:09.823 2014-08-19T01:16:02.240 2014-08-19T01:18:27.247 100 GSM1399189 SRR1299463.bw Primary T-ALL sample_8 cell type: human primary T-ALL SRP042286 SRS620756 SRX553464 SRR1299464 36804634 36804634 1 TRUE FALSE 36658409 1821916044 NA NA 2014-05-27T10:53:09.823 2014-08-19T01:16:02.240 2014-08-19T01:18:27.247 100 GSM1399189 SRR1299464.bw Primary T-ALL sample_8 cell type: human primary T-ALL SRP042286 SRS620756 SRX553464 SRR1299465 32356566 32356566 1 TRUE FALSE 32226504 1601629897 NA NA 2014-05-27T10:53:09.823 2014-08-19T01:16:02.240 2014-08-19T01:18:27.247 100 GSM1399189 SRR1299465.bw Primary T-ALL sample_8 cell type: human primary T-ALL SRP042286 SRS620757 SRX553463 SRR1299460 69599414 69599414 1 TRUE FALSE 69345651 3442999326 NA NA 2014-05-27T10:52:55.453 2014-08-19T01:15:59.710 2014-08-19T01:18:27.513 100 GSM1399188 SRR1299460.bw Primary T-ALL sample_7 cell type: human primary T-ALL SRP042286 SRS620757 SRX553463 SRR1299461 69926358 69926358 1 TRUE FALSE 69672204 3459380068 NA NA 2014-05-27T10:52:55.453 2014-08-19T01:15:59.710 2014-08-19T01:18:27.513 100 GSM1399188 SRR1299461.bw Primary T-ALL sample_7 cell type: human primary T-ALL SRP042286 SRS620758 SRX553465 SRR1299466 44510348 44510348 1 TRUE FALSE 44355903 2203183812 NA NA 2014-05-27T10:53:03.563 2014-08-19T01:16:04.990 2014-08-19T01:18:28.100 100 GSM1399190 SRR1299466.bw Primary T-ALL sample_9 cell type: human primary T-ALL SRP042286 SRS620758 SRX553465 SRR1299467 44659780 44659780 1 TRUE FALSE 44507280 2210837334 NA NA 2014-05-27T10:53:03.563 2014-08-19T01:16:04.990 2014-08-19T01:18:28.100 100 GSM1399190 SRR1299467.bw Primary T-ALL sample_9 cell type: human primary T-ALL SRP042286 SRS620758 SRX553465 SRR1299468 39262844 39262844 1 TRUE FALSE 39126177 1943373266 NA NA 2014-05-27T10:53:03.563 2014-08-19T01:16:04.990 2014-08-19T01:18:28.100 100 GSM1399190 SRR1299468.bw Primary T-ALL sample_9 cell type: human primary T-ALL SRP042286 SRS620759 SRX553466 SRR1299469 77592110 77592110 1 TRUE FALSE 76172386 3752924695 NA NA 2014-05-27T10:53:24.740 2014-08-19T01:16:07.490 2014-08-19T01:18:28.410 100 GSM1399191 SRR1299469.bw Primary T-ALL sample_10 cell type: human primary T-ALL SRP042286 SRS620759 SRX553466 SRR1299470 77921790 77921790 1 TRUE FALSE 76495697 3768532531 NA NA 2014-05-27T10:53:24.740 2014-08-19T01:16:07.490 2014-08-19T01:18:28.410 100 GSM1399191 SRR1299470.bw Primary T-ALL sample_10 cell type: human primary T-ALL SRP042286 SRS620759 SRX553466 SRR1299471 69572518 69572518 1 TRUE FALSE 68317043 3365871101 NA NA 2014-05-27T10:53:24.740 2014-08-19T01:16:07.490 2014-08-19T01:18:28.410 100 GSM1399191 SRR1299471.bw Primary T-ALL sample_10 cell type: human primary T-ALL SRP042286 SRS620760 SRX553467 SRR1299472 415696520 415696520 1 TRUE FALSE 405648382 20078842042 NA NA 2014-05-27T10:52:59.287 2014-08-19T01:16:10.237 2014-08-19T01:18:28.747 102 GSM1399192 SRR1299472.bw CUTLL1 cells treated with DMSO c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620761 SRX553468 SRR1299473 431637878 431637878 1 TRUE FALSE 424432002 21007963862 NA NA 2014-05-27T10:53:05.623 2014-08-19T01:16:13.007 2014-08-19T01:22:21.937 102 GSM1399193 SRR1299473.bw CUTLL1 cells treated with GSI c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620762 SRX553469 SRR1299474 244505464 244505464 1 TRUE FALSE 240677753 12029005527 NA NA 2014-05-27T10:53:01.377 2014-08-19T01:16:15.713 2014-08-19T01:22:22.357 102 GSM1399194 SRR1299474.bw HPBALL cells treated with DMSO c("cell type: human T-ALL cell line", "cell line: HPBALL") SRP042286 SRS620763 SRX553470 SRR1299475 247239780 247239780 1 TRUE FALSE 243530658 12201021714 NA NA 2014-05-27T10:53:18.567 2014-08-19T01:16:18.430 2014-08-19T01:22:22.690 102 GSM1399195 SRR1299475.bw HPBALL cells treated with GSI c("cell type: human T-ALL cell line", "cell line: HPBALL") SRP042286 SRS620764 SRX553472 SRR1299477 46484003 46484003 1 FALSE FALSE 45511369 2309630076 NA NA 2014-05-27T10:53:28.767 2014-08-19T01:16:23.920 2014-08-19T01:22:23.013 51 GSM1399197 SRR1299477.bw CUTLL1 carrying an shRNA targeting Renilla_2 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620765 SRX553471 SRR1299476 17184178 17184178 1 FALSE FALSE 16978754 862300215 NA NA 2014-05-27T10:53:22.640 2014-08-19T01:16:21.147 2014-08-19T01:22:23.367 51 GSM1399196 SRR1299476.bw CUTLL1 carrying an shRNA targeting Renilla_1 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620766 SRX553473 SRR1299478 15689937 15689937 1 FALSE FALSE 15473798 785766991 NA NA 2014-05-27T10:53:16.350 2014-08-19T01:16:26.693 2014-08-19T01:22:23.797 51 GSM1399198 SRR1299478.bw CUTLL1 carrying an shRNA targeting Renilla_3 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620767 SRX553474 SRR1299479 18683825 18683825 1 FALSE FALSE 18474685 938476330 NA NA 2014-05-27T10:53:20.660 2014-08-19T01:16:29.500 2014-08-19T01:22:24.207 51 GSM1399199 SRR1299479.bw CUTLL1 carrying an shRNA targeting Renilla_4 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620768 SRX553475 SRR1299480 18135108 18135108 1 FALSE FALSE 17954559 912137473 NA NA 2014-05-27T10:53:30.860 2014-08-19T01:16:32.303 2014-08-19T01:22:24.587 51 GSM1399200 SRR1299480.bw CUTLL1 carrying an shRNA targeting Renilla_5 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620769 SRX553476 SRR1299481 24097240 24097240 1 FALSE FALSE 23413030 1183963268 NA NA 2014-05-27T10:53:14.040 2014-08-19T01:14:12.827 2014-08-19T01:18:29.023 51 GSM1399201 SRR1299481.bw CUTLL1 carrying an shRNA targeting LUNAR1_1 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620770 SRX553477 SRR1299482 64224466 64224466 1 FALSE FALSE 62709230 3174527177 NA NA 2014-05-27T10:53:26.720 2014-08-19T01:14:15.633 2014-08-19T01:18:29.680 51 GSM1399202 SRR1299482.bw CUTLL1 carrying an shRNA targeting LUNAR1_2 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620771 SRX553479 SRR1299484 20074781 20074781 1 FALSE FALSE 19487929 986659309 NA NA 2014-05-27T10:53:37.723 2014-08-19T01:14:20.617 2014-08-19T01:18:29.987 51 GSM1399204 SRR1299484.bw CUTLL1 carrying an shRNA targeting LUNAR1_4 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620772 SRX553478 SRR1299483 29688930 29688930 1 FALSE FALSE 28952306 1465573194 NA NA 2014-05-27T10:53:33.387 2014-08-19T01:14:18.123 2014-08-19T01:18:30.350 51 GSM1399203 SRR1299483.bw CUTLL1 carrying an shRNA targeting LUNAR1_3 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620773 SRX553480 SRR1299485 21854407 21854407 1 FALSE FALSE 21268579 1076389904 NA NA 2014-05-27T10:53:35.687 2014-08-19T01:14:23.297 2014-08-19T01:18:30.940 51 GSM1399205 SRR1299485.bw CUTLL1 carrying an shRNA targeting LUNAR1_5 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620774 SRX553481 SRR1299486 14408987 14408987 1 FALSE FALSE 14242001 723967615 NA NA 2014-05-27T10:53:41.890 2014-08-19T01:14:25.920 2014-08-19T01:18:31.290 51 GSM1399206 SRR1299486.bw CUTLL1 carrying a second shRNA targeting LUNAR1_1 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620775 SRX553482 SRR1299487 12610691 12610691 1 FALSE FALSE 12473895 633954805 NA NA 2014-05-27T10:53:39.720 2014-08-19T01:14:28.247 2014-08-19T01:18:31.600 51 GSM1399207 SRR1299487.bw CUTLL1 carrying a second shRNA targeting LUNAR1_2 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620776 SRX553483 SRR1299488 10535211 10535211 1 FALSE FALSE 10435934 530585395 NA NA 2014-05-27T10:53:44.927 2014-08-19T01:14:30.623 2014-08-19T01:18:31.923 51 GSM1399208 SRR1299488.bw CUTLL1 carrying a second shRNA targeting LUNAR1_3 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620777 SRX553484 SRR1299489 9769054 9769054 1 FALSE FALSE 9674766 491968077 NA NA 2014-05-27T10:52:40.507 2014-08-19T01:14:32.853 2014-08-19T01:18:32.263 51 GSM1399209 SRR1299489.bw CUTLL1 carrying a second shRNA targeting LUNAR1_4 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620778 SRX553485 SRR1299490 8165599 8165599 1 FALSE FALSE 8079971 410871943 NA NA 2014-05-27T10:52:44.723 2014-08-19T01:14:35.160 2014-08-19T01:18:32.657 51 GSM1399210 SRR1299490.bw CUTLL1 carrying a second shRNA targeting LUNAR1_5 c("cell type: human T-ALL cell line", "cell line: CUTTL1") SRP042286 SRS620757 SRX553463 SRR1299462 62687922 0 0 TRUE FALSE 0 NA NA NA 2014-05-27T10:52:55.453 2014-08-19T01:15:59.710 2014-08-19T01:18:27.513 100 GSM1399188 NA Primary T-ALL sample_7 cell type: human primary T-ALL