project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP043694 SRS651594 SRX642707 SRR1502792 72041512 72041512 1 TRUE FALSE 71177157 4240357519 NA NA 2014-07-01T09:36:20.550 2015-10-01T01:19:04.290 2015-10-01T01:25:25.220 120 GSM1423110 SRR1502792.bw HGD 4 c("degree of dysplasia: High Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651595 SRX642708 SRR1502793 55171988 55171988 1 TRUE FALSE 54513749 3247162134 NA NA 2014-07-01T09:36:17.890 2015-10-01T01:19:06.183 2015-10-01T01:25:24.820 120 GSM1423111 SRR1502793.bw HGD 21 c("degree of dysplasia: High Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651596 SRX642709 SRR1502794 57057130 57057130 1 TRUE FALSE 56099230 3342626674 NA NA 2014-07-01T09:36:23.097 2015-10-01T01:19:07.200 2015-10-01T01:25:24.453 120 GSM1423112 SRR1502794.bw HGD 6 c("degree of dysplasia: High Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651597 SRX642710 SRR1502795 64106592 64106592 1 TRUE FALSE 55025752 3219269203 NA NA 2014-07-01T09:36:28.200 2015-10-01T01:19:08.443 2015-10-01T01:25:23.973 120 GSM1423113 SRR1502795.bw HGD 20 c("degree of dysplasia: High Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651598 SRX642711 SRR1502796 55823168 55823168 1 TRUE FALSE 54958437 3273021416 NA NA 2014-07-01T09:36:35.980 2015-10-01T01:19:09.617 2015-10-01T01:25:23.527 120 GSM1423114 SRR1502796.bw HGD 39 c("degree of dysplasia: High Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651599 SRX642712 SRR1502797 61173716 61173716 1 TRUE FALSE 60358314 3596425902 NA NA 2014-07-01T09:36:33.177 2015-10-01T01:11:26.617 2015-10-01T01:15:48.983 120 GSM1423115 SRR1502797.bw HGD 40 c("degree of dysplasia: High Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651600 SRX642713 SRR1502798 64638024 64638024 1 TRUE FALSE 63807816 3800986971 NA NA 2014-07-01T09:36:25.530 2015-10-01T01:11:29.257 2015-10-01T01:15:48.720 120 GSM1423116 SRR1502798.bw HGD 43 c("degree of dysplasia: High Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651601 SRX642714 SRR1502799 72261480 72261480 1 TRUE FALSE 70961702 4225605763 NA NA 2014-07-01T09:36:30.503 2015-10-01T01:11:30.330 2015-10-01T01:15:47.780 120 GSM1423117 SRR1502799.bw LGD 2 c("degree of dysplasia: Low Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651602 SRX642715 SRR1502800 53690744 53690744 1 TRUE FALSE 53010104 3155742047 NA NA 2014-07-01T09:36:41.100 2015-10-01T01:11:31.603 2015-10-01T01:15:47.523 120 GSM1423118 SRR1502800.bw LGD 19 c("degree of dysplasia: Low Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651603 SRX642717 SRR1502802 71577182 71577182 1 TRUE FALSE 69286968 4127162422 NA NA 2014-07-01T09:36:38.630 2015-10-01T01:11:33.913 2015-10-01T01:15:47.260 120 GSM1423120 SRR1502802.bw LGD 48 c("degree of dysplasia: Low Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651604 SRX642716 SRR1502801 45530400 45530400 1 TRUE FALSE 44846350 2670544865 NA NA 2014-07-01T09:36:46.120 2015-10-01T01:11:32.683 2015-10-01T01:15:46.913 120 GSM1423119 SRR1502801.bw LGD 47 c("degree of dysplasia: Low Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651605 SRX642718 SRR1502803 64563716 64563716 1 TRUE FALSE 63008986 3750108364 NA NA 2014-07-01T09:36:48.530 2015-10-01T01:11:35.527 2015-10-01T01:15:46.277 120 GSM1423121 SRR1502803.bw LGD 58 c("degree of dysplasia: Low Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651606 SRX642719 SRR1502804 57581884 57581884 1 TRUE FALSE 56558043 3368244745 NA NA 2014-07-01T09:36:56.070 2015-10-01T01:11:36.503 2015-10-01T01:15:45.963 120 GSM1423122 SRR1502804.bw LGD 61 c("degree of dysplasia: Low Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651607 SRX642720 SRR1502805 68162466 68162466 1 TRUE FALSE 56943058 3369680314 NA NA 2014-07-01T09:36:43.590 2015-10-01T01:11:37.973 2015-10-01T01:15:45.677 120 GSM1423123 SRR1502805.bw LGD 62 c("degree of dysplasia: Low Grade Dsyplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651608 SRX642721 SRR1502806 61262662 61262662 1 TRUE FALSE 60386509 3597604998 NA NA 2014-07-01T09:36:53.477 2015-10-01T01:11:39.303 2015-10-01T01:15:45.430 120 GSM1423124 SRR1502806.bw SIM 7 c("degree of dysplasia: Simple intestinal metaplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651609 SRX642723 SRR1502808 58820954 58820954 1 TRUE FALSE 58018124 3456927942 NA NA 2014-07-01T09:37:06.473 2015-10-01T01:11:41.987 2015-10-01T01:15:45.183 120 GSM1423126 SRR1502808.bw SIM 26 c("degree of dysplasia: Simple intestinal metaplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651610 SRX642722 SRR1502807 63903826 63903826 1 TRUE FALSE 63100419 3760501451 NA NA 2014-07-01T09:37:01.450 2015-10-01T01:11:40.990 2015-10-01T01:15:44.930 120 GSM1423125 SRR1502807.bw SIM 16 c("degree of dysplasia: Simple intestinal metaplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651611 SRX642726 SRR1502811 69078756 69078756 1 TRUE FALSE 67531395 4024546625 NA NA 2014-07-01T09:37:09.413 2015-10-01T01:11:45.963 2015-10-01T01:15:44.667 120 GSM1423129 SRR1502811.bw SIM 55 c("degree of dysplasia: Simple intestinal metaplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651612 SRX642724 SRR1502809 46866296 46866296 1 TRUE FALSE 45926418 2729034944 NA NA 2014-07-01T09:36:58.613 2015-10-01T01:11:43.320 2015-10-01T01:15:44.323 120 GSM1423127 SRR1502809.bw SIM 38 c("degree of dysplasia: Simple intestinal metaplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651613 SRX642725 SRR1502810 57201674 57201674 1 TRUE FALSE 56141459 3342239122 NA NA 2014-07-01T09:36:51.023 2015-10-01T01:11:44.697 2015-10-01T01:15:44.000 120 GSM1423128 SRR1502810.bw SIM 41 c("degree of dysplasia: Simple intestinal metaplasia", "biopsy site: Barrett's Oesophagus segment") SRP043694 SRS651615 SRX642727 SRR1502812 63256996 63256996 1 TRUE FALSE 61333755 3653915417 NA NA 2014-07-01T09:37:04.070 2015-10-01T01:11:46.920 2015-10-01T01:15:43.410 120 GSM1423130 SRR1502812.bw SIM 64 c("degree of dysplasia: Simple intestinal metaplasia", "biopsy site: Barrett's Oesophagus segment")