project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP044042 SRS653507 SRX645340 SRR1506025 102086548 102086548 1 TRUE FALSE 93632303 4329127612 NA NA 2014-07-03T11:17:19.627 2015-05-21T01:16:33.847 2015-05-21T01:26:16.107 102 GSM1425760 SRR1506025.bw K06-P01 c("sample type: E*", "pretreatment: None", "grade: 3", "Stage: IV") SRP044042 SRS653508 SRX645341 SRR1506026 118634278 118634278 1 TRUE FALSE 111846429 5197940638 NA NA 2014-07-03T11:17:21.633 2015-05-21T01:16:35.620 2015-05-21T01:26:15.873 102 GSM1425761 SRR1506026.bw K06-P02 c("sample type: E*", "pretreatment: None", "grade: 3", "Stage: III") SRP044042 SRS653509 SRX645342 SRR1506027 125789048 125789048 1 TRUE FALSE 120491359 5638911178 NA NA 2014-07-03T11:17:23.653 2015-05-21T01:16:36.750 2015-05-21T01:26:15.577 102 GSM1425762 SRR1506027.bw K06-P03 c("sample type: E*", "pretreatment: None", "grade: 3", "Stage: III") SRP044042 SRS653510 SRX645343 SRR1506028 111298044 111298044 1 TRUE FALSE 102077770 4622455615 NA NA 2014-07-03T11:17:25.717 2015-05-21T01:16:38.420 2015-05-21T01:26:15.190 102 GSM1425763 SRR1506028.bw K06-P04 c("sample type: E*", "pretreatment: None", "grade: 4", "Stage: IV") SRP044042 SRS653511 SRX645345 SRR1506030 110325744 110325744 1 TRUE FALSE 76035444 3390707838 NA NA 2014-07-03T11:17:29.723 2015-05-21T01:16:42.053 2015-05-21T01:26:14.920 102 GSM1425765 SRR1506030.bw K0501Sr c("sample type: S", "pretreatment: None", "grade: Sarcomatoid", "Stage: IV") SRP044042 SRS653512 SRX645344 SRR1506029 81596918 81596918 1 TRUE FALSE 67130247 2995378061 NA NA 2014-07-03T11:17:27.777 2015-05-21T01:16:40.617 2015-05-21T01:25:25.627 102 GSM1425764 SRR1506029.bw K06-P05 c("sample type: E*", "pretreatment: None", "grade: 4", "Stage: IV") SRP044042 SRS653513 SRX645346 SRR1506031 122791868 122791868 1 TRUE FALSE 117037559 5538063842 NA NA 2014-07-03T11:17:31.687 2015-05-21T01:16:43.397 2015-05-21T01:25:25.350 102 GSM1425766 SRR1506031.bw K0502R c("sample type: R", "pretreatment: None", "grade: Rhabdoid", "Stage: IV") SRP044042 SRS653514 SRX645347 SRR1506032 118889316 118889316 1 TRUE FALSE 113729699 5387238886 NA NA 2014-07-03T11:16:10.273 2015-05-21T01:16:44.943 2015-05-21T01:25:25.103 102 GSM1425767 SRR1506032.bw K0503Er c("sample type: E", "pretreatment: None", "grade: Epithelioid", "Stage: IV") SRP044042 SRS653515 SRX645349 SRR1506034 114640300 114640300 1 TRUE FALSE 104069098 4789759336 NA NA 2014-07-03T11:16:15.330 2015-05-21T01:16:47.490 2015-05-21T01:25:24.767 102 GSM1425769 SRR1506034.bw K0505R c("sample type: R", "pretreatment: Sutent", "grade: Rhabdoid", "Stage: IV") SRP044042 SRS653516 SRX645348 SRR1506033 126236262 126236262 1 TRUE FALSE 113316477 5214783603 NA NA 2014-07-03T11:16:13.240 2015-05-21T01:16:46.130 2015-05-21T01:25:24.180 102 GSM1425768 SRR1506033.bw K0504Sr c("sample type: S", "pretreatment: Sutent", "grade: Sarcomatoid", "Stage: IV") SRP044042 SRS653517 SRX645351 SRR1506036 106013128 106013128 1 TRUE FALSE 102823243 4901092524 NA NA 2014-07-03T11:16:30.307 2015-05-21T01:16:50.720 2015-05-21T01:25:23.787 102 GSM1425771 SRR1506036.bw K0507S c("sample type: S", "pretreatment: None", "grade: Sarcomatoid", "Stage: IV") SRP044042 SRS653518 SRX645350 SRR1506035 92608256 92608256 1 TRUE FALSE 84744645 3857561166 NA NA 2014-07-03T11:16:17.533 2015-05-21T01:16:48.867 2015-05-21T01:25:23.463 102 GSM1425770 SRR1506035.bw K0506Er c("sample type: E", "pretreatment: Sutent", "grade: Epithelioid", "Stage: IV") SRP044042 SRS653519 SRX645352 SRR1506037 94770130 94770130 1 TRUE FALSE 91145870 4342692295 NA NA 2014-07-03T11:16:32.420 2015-05-21T01:16:52.520 2015-05-21T01:25:23.157 102 GSM1425772 SRR1506037.bw K0508E c("sample type: E", "pretreatment: None", "grade: Epithelioid", "Stage: IV") SRP044042 SRS653520 SRX645353 SRR1506038 106600864 106600864 1 TRUE FALSE 93423940 4315346809 NA NA 2014-07-03T11:16:34.577 2015-05-21T01:16:53.820 2015-05-21T01:25:22.870 102 GSM1425773 SRR1506038.bw K0513R c("sample type: R", "pretreatment: None", "grade: Rhabdoid", "Stage: IV") SRP044042 SRS653521 SRX645354 SRR1506039 99395208 99395208 1 TRUE FALSE 83294441 3892187897 NA NA 2014-07-03T11:16:36.700 2015-05-21T01:16:55.337 2015-05-21T01:25:22.573 102 GSM1425774 SRR1506039.bw K0514Er c("sample type: E", "pretreatment: None", "grade: Epithelioid", "Stage: IV") SRP044042 SRS653522 SRX645355 SRR1506040 121593534 121593534 1 TRUE FALSE 107677414 5039207308 NA NA 2014-07-03T11:16:45.430 2015-05-21T01:16:56.487 2015-05-21T01:25:22.290 102 GSM1425775 SRR1506040.bw K0515S c("sample type: S", "pretreatment: None", "grade: Sarcomatoid", "Stage: IV") SRP044042 SRS653523 SRX645356 SRR1506041 109040644 109040644 1 TRUE FALSE 90073000 4258203632 NA NA 2014-07-03T11:16:47.603 2015-05-21T01:16:57.620 2015-05-21T01:25:21.970 102 GSM1425776 SRR1506041.bw K0516E c("sample type: E", "pretreatment: None", "grade: Epithelioid", "Stage: IV") SRP044042 SRS653524 SRX645357 SRR1506042 106760302 106760302 1 TRUE FALSE 99652851 4672454475 NA NA 2014-07-03T11:16:49.633 2015-05-21T01:15:05.297 2015-05-21T01:25:21.520 102 GSM1425777 SRR1506042.bw K0517S c("sample type: S", "pretreatment: None", "grade: Sarcomatoid", "Stage: III") SRP044042 SRS653525 SRX645358 SRR1506043 119728312 119728312 1 TRUE FALSE 112605272 5320036908 NA NA 2014-07-03T11:16:51.630 2015-05-21T01:15:07.637 2015-05-21T01:25:21.107 102 GSM1425778 SRR1506043.bw K0518E c("sample type: E", "pretreatment: None", "grade: Epithelioid", "Stage: III") SRP044042 SRS653526 SRX645359 SRR1506044 108765792 108765792 1 TRUE FALSE 102958695 4858474062 NA NA 2014-07-03T11:16:53.610 2015-05-21T01:15:09.007 2015-05-21T01:25:20.710 102 GSM1425779 SRR1506044.bw K0519Sr c("sample type: S", "pretreatment: None", "grade: Sarcomatoid", "Stage: IV") SRP044042 SRS653527 SRX645360 SRR1506045 116109236 116109236 1 TRUE FALSE 108392407 5079636311 NA NA 2014-07-03T11:16:55.783 2015-05-21T01:15:10.300 2015-05-21T01:25:20.350 102 GSM1425780 SRR1506045.bw K0520R c("sample type: R", "pretreatment: None", "grade: Rhabdoid", "Stage: IV") SRP044042 SRS653528 SRX645361 SRR1506046 100896384 100896384 1 TRUE FALSE 92058652 4272350495 NA NA 2014-07-03T11:16:58.263 2015-05-21T01:15:11.610 2015-05-21T01:25:19.850 102 GSM1425781 SRR1506046.bw K0521Er c("sample type: E", "pretreatment: None", "grade: Epithelioid", "Stage: IV") SRP044042 SRS653529 SRX645362 SRR1506047 107970156 107970156 1 TRUE FALSE 101905173 4770961440 NA NA 2014-07-03T11:17:15.420 2015-05-21T01:15:13.017 2015-05-21T01:25:19.320 102 GSM1425782 SRR1506047.bw K0522S c("sample type: S", "pretreatment: None", "grade: Sarcomatoid", "Stage: IV") SRP044042 SRS653530 SRX645363 SRR1506048 136487710 136487710 1 TRUE FALSE 129702875 6149292461 NA NA 2014-07-03T11:17:17.620 2015-05-21T01:15:14.527 2015-05-21T01:25:18.830 102 GSM1425783 SRR1506048.bw K0523E c("sample type: E", "pretreatment: None", "grade: Epithelioid", "Stage: IV")