project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP045322 SRS676082 SRX671583 SRR1538689 38172954 38172954 1 TRUE FALSE 35035953 2727079883 NA NA 2014-08-07T07:37:05.950 2015-03-10T01:21:41.590 2015-03-12T01:29:21.377 202 GSM1466928 SRR1538689.bw Negative Control siRNA, replicate 1 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: negative control siRNAs") SRP045322 SRS676082 SRX671583 SRR1538690 37816778 37816778 1 TRUE FALSE 34712222 2689937201 NA NA 2014-08-07T07:37:05.950 2015-03-10T01:21:41.590 2015-03-12T01:29:21.377 202 GSM1466928 SRR1538690.bw Negative Control siRNA, replicate 1 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: negative control siRNAs") SRP045322 SRS676083 SRX671584 SRR1538691 50932718 50932718 1 TRUE FALSE 43090328 2851168157 NA NA 2014-08-07T07:37:09.130 2015-03-10T01:19:37.223 2015-03-12T01:24:48.030 202 GSM1466929 SRR1538691.bw Negative Control siRNA, replicate 2 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: negative control siRNAs") SRP045322 SRS676083 SRX671584 SRR1538692 50644000 50644000 1 TRUE FALSE 42870421 2817846338 NA NA 2014-08-07T07:37:09.130 2015-03-10T01:19:37.223 2015-03-12T01:24:48.030 202 GSM1466929 SRR1538692.bw Negative Control siRNA, replicate 2 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: negative control siRNAs") SRP045322 SRS676084 SRX671585 SRR1538693 48929726 48929726 1 TRUE FALSE 45549410 3606479803 NA NA 2014-08-07T07:37:11.343 2015-03-10T01:18:54.683 2015-03-12T01:36:35.443 202 GSM1466930 SRR1538693.bw Negative Control siRNA, replicate 3 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: negative control siRNAs") SRP045322 SRS676084 SRX671585 SRR1538694 48349172 48349172 1 TRUE FALSE 45222134 3557405822 NA NA 2014-08-07T07:37:11.343 2015-03-10T01:18:54.683 2015-03-12T01:36:35.443 202 GSM1466930 SRR1538694.bw Negative Control siRNA, replicate 3 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: negative control siRNAs") SRP045322 SRS676085 SRX671586 SRR1538695 46455110 46455110 1 TRUE FALSE 44776381 3887355645 NA NA 2014-08-07T07:37:13.467 2015-03-10T01:19:05.867 2015-03-12T01:33:23.753 202 GSM1466931 SRR1538695.bw HER2 siRNA knockdown, replicate 1 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: HER2-specific siRNAs") SRP045322 SRS676085 SRX671586 SRR1538696 45639106 45639106 1 TRUE FALSE 43986120 3809105950 NA NA 2014-08-07T07:37:13.467 2015-03-10T01:19:05.867 2015-03-12T01:33:23.753 202 GSM1466931 SRR1538696.bw HER2 siRNA knockdown, replicate 1 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: HER2-specific siRNAs") SRP045322 SRS676086 SRX671587 SRR1538697 44933044 44933044 1 TRUE FALSE 43223147 3850909238 NA NA 2014-08-07T07:37:15.613 2015-03-10T01:18:50.200 2015-03-12T01:33:22.803 202 GSM1466932 SRR1538697.bw HER2 siRNA knockdown, replicate 2 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: HER2-specific siRNAs") SRP045322 SRS676086 SRX671587 SRR1538698 44095900 44095900 1 TRUE FALSE 42343708 3768571198 NA NA 2014-08-07T07:37:15.613 2015-03-10T01:18:50.200 2015-03-12T01:33:22.803 202 GSM1466932 SRR1538698.bw HER2 siRNA knockdown, replicate 2 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: HER2-specific siRNAs") SRP045322 SRS676087 SRX671588 SRR1538699 49565288 49565288 1 TRUE FALSE 47842142 4330526272 NA NA 2014-08-07T07:37:17.870 2015-03-10T01:19:50.063 2015-03-12T01:33:20.940 202 GSM1466933 SRR1538699.bw HER2 siRNA knockdown, replicate 3 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: HER2-specific siRNAs") SRP045322 SRS676087 SRX671588 SRR1538700 48547662 48547662 1 TRUE FALSE 46856894 4231997087 NA NA 2014-08-07T07:37:17.870 2015-03-10T01:19:50.063 2015-03-12T01:33:20.940 202 GSM1466933 SRR1538700.bw HER2 siRNA knockdown, replicate 3 c("cell line: BT-474", "cell line origin: female caucasian with ductal carcinoma", "cell type: breast cancer cell line", "transfected with: HER2-specific siRNAs")