project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP045632 SRS686889 SRX683721 SRR1554436 44476956 44476956 1 TRUE FALSE 41084916 4098598129 NA NA 2014-08-20T11:11:05.753 2014-09-29T00:44:09.693 2014-09-29T01:08:13.723 202 GSM1482163 SRR1554436.bw Day 0, biological replicate 1 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: none (untreated control)", "cell subtype: iPS cells", "time point: Day 0") SRP045632 SRS686890 SRX683722 SRR1554437 35754396 35754396 1 TRUE FALSE 33336777 3326816852 NA NA 2014-08-20T11:11:09.253 2014-09-29T00:44:09.827 2014-09-29T01:08:13.963 202 GSM1482164 SRR1554437.bw Day 0, biological replicate 2 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: none (untreated control)", "cell subtype: iPS cells", "time point: Day 0") SRP045632 SRS686891 SRX683723 SRR1554438 40372848 40372848 1 TRUE FALSE 37688473 3759858890 NA NA 2014-08-20T11:11:20.920 2014-09-29T00:44:09.867 2014-09-29T01:08:15.170 202 GSM1482165 SRR1554438.bw Day 0, biological replicate 3 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: none (untreated control)", "cell subtype: iPS cells", "time point: Day 0") SRP045632 SRS686892 SRX683724 SRR1554439 39152322 39152322 1 TRUE FALSE 35119440 3495020346 NA NA 2014-08-20T11:11:23.083 2014-09-29T00:44:09.897 2014-09-29T01:08:15.750 202 GSM1482166 SRR1554439.bw Day 1 post NGN induction, biological replicate 1 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: 0.5ug/ml doxycycline", "cell subtype: Fibroblast derived iPS cells, differentiated neurons", "time point: Day 1 post NGN induction") SRP045632 SRS686893 SRX683725 SRR1554440 47420988 47420988 1 TRUE FALSE 42772803 4254868735 NA NA 2014-08-20T11:11:25.277 2014-09-29T00:44:09.950 2014-09-29T01:08:15.980 202 GSM1482167 SRR1554440.bw Day 1 post NGN induction, biological replicate 2 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: 0.5ug/ml doxycycline", "cell subtype: Fibroblast derived iPS cells, differentiated neurons", "time point: Day 1 post NGN induction") SRP045632 SRS686894 SRX683726 SRR1554441 42688716 42688716 1 TRUE FALSE 38547817 3841817014 NA NA 2014-08-20T11:11:27.880 2014-09-29T00:44:09.987 2014-09-29T01:08:16.230 202 GSM1482168 SRR1554441.bw Day 1 post NGN induction, biological replicate 3 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: 0.5ug/ml doxycycline", "cell subtype: Fibroblast derived iPS cells, differentiated neurons", "time point: Day 1 post NGN induction") SRP045632 SRS686895 SRX683727 SRR1554442 34838784 34838784 1 TRUE FALSE 30093771 2966793580 NA NA 2014-08-20T11:11:30.150 2014-09-29T00:44:10.017 2014-09-29T01:08:16.440 202 GSM1482169 SRR1554442.bw Day 3 post NGN induction, biological replicate 1 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: 0.5ug/ml doxycycline", "cell subtype: Fibroblast derived iPS cells, differentiated neurons", "time point: Day 3 post NGN induction") SRP045632 SRS686896 SRX683728 SRR1554443 39168634 39168634 1 TRUE FALSE 34293262 3391685620 NA NA 2014-08-20T11:11:32.310 2014-09-29T00:44:10.070 2014-09-29T01:08:16.653 202 GSM1482170 SRR1554443.bw Day 3 post NGN induction, biological replicate 2 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: 0.5ug/ml doxycycline", "cell subtype: Fibroblast derived iPS cells, differentiated neurons", "time point: Day 3 post NGN induction") SRP045632 SRS686897 SRX683729 SRR1554444 35508036 35508036 1 TRUE FALSE 31567181 3136509982 NA NA 2014-08-20T11:11:34.410 2014-09-29T00:44:10.100 2014-09-29T01:08:16.983 202 GSM1482171 SRR1554444.bw Day 3 post NGN induction, biological replicate 3 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: 0.5ug/ml doxycycline", "cell subtype: Fibroblast derived iPS cells, differentiated neurons", "time point: Day 3 post NGN induction") SRP045632 SRS686898 SRX683730 SRR1554445 44028220 44028220 1 TRUE FALSE 38329805 3800679684 NA NA 2014-08-20T11:11:44.193 2014-09-29T00:44:10.130 2014-09-29T01:08:17.187 202 GSM1482172 SRR1554445.bw Day 4 post NGN induction, biological replicate 1 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: 0.5ug/ml doxycycline", "cell subtype: Fibroblast derived iPS cells, differentiated neurons", "time point: Day 4 post NGN induction") SRP045632 SRS686899 SRX683731 SRR1554446 40587180 40587180 1 TRUE FALSE 36271890 3607528519 NA NA 2014-08-20T11:11:46.330 2014-09-29T00:44:10.163 2014-09-29T01:08:17.417 202 GSM1482173 SRR1554446.bw Day 4 post NGN induction, biological replicate 2 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: 0.5ug/ml doxycycline", "cell subtype: Fibroblast derived iPS cells, differentiated neurons", "time point: Day 4 post NGN induction") SRP045632 SRS686900 SRX683732 SRR1554447 39403714 39403714 1 TRUE FALSE 35799742 3569083677 NA NA 2014-08-20T11:11:48.433 2014-09-29T00:44:10.197 2014-09-29T01:08:17.647 202 GSM1482174 SRR1554447.bw Day 4 post NGN induction, biological replicate 3 c("cell line source: Personal Genome Project iPS cell line PGP1 (hu43860C)", "cell type: Fibroblast derived iPS cells", "genotype/variation: harboring doxycycline inducible Neurogenin vectors", "treated with: 0.5ug/ml doxycycline", "cell subtype: Fibroblast derived iPS cells, differentiated neurons", "time point: Day 4 post NGN induction")