project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP049769 SRS743686 SRX758624 SRR1649699 54686996 54686996 1 TRUE FALSE 51923131 5178458123 NA NA 2014-11-13T14:40:22.343 2016-01-11T01:11:20.033 2016-01-11T01:14:18.227 202 GSM1544680 SRR1649699.bw PDX4_CON1 c("cell type: PDX cells", "treatment: Sterile PBS b.i.d. IP for 10 days", "growth protocol: PDX was established in NSG mice for 4 passages", "basecalling: CASAVA 1.8.2", "alignment tool: STAR", "differential expression tool: EdgeR") SRP049769 SRS743687 SRX758625 SRR1649700 72600986 72600986 1 TRUE FALSE 70049845 7003730694 NA NA 2014-11-13T14:40:20.043 2016-01-11T01:11:22.333 2016-01-11T01:14:18.003 202 GSM1544681 SRR1649700.bw PDX4_CON2 c("cell type: PDX cells", "treatment: Sterile PBS b.i.d. IP for 10 days", "growth protocol: PDX was established in NSG mice for 4 passages", "basecalling: CASAVA 1.8.2", "alignment tool: STAR", "differential expression tool: EdgeR") SRP049769 SRS743688 SRX758626 SRR1649701 73022552 73022552 1 TRUE FALSE 71351221 7143988308 NA NA 2014-11-13T14:40:26.637 2016-01-11T01:11:23.323 2016-01-11T01:14:17.790 202 GSM1544682 SRR1649701.bw PDX4_RIBA1 c("cell type: PDX cells", "treatment: 80mg/kg/b.i.d ribavarin IP for 10 days", "growth protocol: PDX was established in NSG mice for 4 passages", "basecalling: CASAVA 1.8.2", "alignment tool: STAR", "differential expression tool: EdgeR") SRP049769 SRS743689 SRX758627 SRR1649702 67092312 67092312 1 TRUE FALSE 65393492 6548604706 NA NA 2014-11-13T14:40:24.553 2016-01-11T01:11:24.523 2016-01-11T01:14:17.607 202 GSM1544683 SRR1649702.bw PDX4_RIBA2 c("cell type: PDX cells", "treatment: 80mg/kg/b.i.d ribavarin IP for 10 days", "growth protocol: PDX was established in NSG mice for 4 passages", "basecalling: CASAVA 1.8.2", "alignment tool: STAR", "differential expression tool: EdgeR")