project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP050147 SRS750218 SRX765941 SRR1660328 30964025 30964025 1 FALSE FALSE 29506432 886212952 NA NA 2014-11-21T20:40:19.213 2015-04-22T16:37:06.217 2015-04-22T16:41:03.023 75 GSM1552807 SRR1660328.bw Rec-OE NCCIT Ribosome profiling (RPF) c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750218 SRX765941 SRR1660329 39632893 39632893 1 FALSE FALSE 38139625 1152265145 NA NA 2014-11-21T20:40:19.213 2015-04-22T16:37:06.217 2015-04-22T16:41:03.023 75 GSM1552807 SRR1660329.bw Rec-OE NCCIT Ribosome profiling (RPF) c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750218 SRX765941 SRR1660330 43632403 43632403 1 FALSE FALSE 40030229 1217904163 NA NA 2014-11-21T20:40:19.213 2015-04-22T16:37:06.217 2015-04-22T16:41:03.023 75 GSM1552807 SRR1660330.bw Rec-OE NCCIT Ribosome profiling (RPF) c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750218 SRX765941 SRR1660331 38175907 38175907 1 FALSE FALSE 34758565 1051123911 NA NA 2014-11-21T20:40:19.213 2015-04-22T16:37:06.217 2015-04-22T16:41:03.023 75 GSM1552807 SRR1660331.bw Rec-OE NCCIT Ribosome profiling (RPF) c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750219 SRX765942 SRR1660332 61772582 61772582 1 FALSE FALSE 59412302 1745969994 NA NA 2014-11-21T20:40:14.590 2015-04-22T16:37:07.360 2015-04-22T16:41:02.830 75 GSM1552808 SRR1660332.bw WT control NCCIT Ribosome profiling (RPF) c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750219 SRX765942 SRR1660333 21771791 21771791 1 FALSE FALSE 20505129 593346279 NA NA 2014-11-21T20:40:14.590 2015-04-22T16:37:07.360 2015-04-22T16:41:02.830 30 GSM1552808 SRR1660333.bw WT control NCCIT Ribosome profiling (RPF) c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750219 SRX765942 SRR1660334 30106441 30106441 1 FALSE FALSE 27253235 817195196 NA NA 2014-11-21T20:40:14.590 2015-04-22T16:37:07.360 2015-04-22T16:41:02.830 75 GSM1552808 SRR1660334.bw WT control NCCIT Ribosome profiling (RPF) c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750219 SRX765942 SRR1660335 44297155 44297155 1 FALSE FALSE 40457992 1207506794 NA NA 2014-11-21T20:40:14.590 2015-04-22T16:37:07.360 2015-04-22T16:41:02.830 75 GSM1552808 SRR1660335.bw WT control NCCIT Ribosome profiling (RPF) c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750220 SRX765943 SRR1660336 25431367 25431367 1 FALSE FALSE 24405694 1192799508 NA NA 2014-11-21T20:40:09.187 2015-04-22T16:37:08.663 2015-04-22T16:41:02.403 50 GSM1552809 SRR1660336.bw HERV-K Rec siRNA NCCIT c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750220 SRX765943 SRR1660337 38282848 38282848 1 FALSE FALSE 37064314 1801843584 NA NA 2014-11-21T20:40:09.187 2015-04-22T16:37:08.663 2015-04-22T16:41:02.403 50 GSM1552809 SRR1660337.bw HERV-K Rec siRNA NCCIT c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750220 SRX765943 SRR1660338 30375771 30375771 1 FALSE FALSE 29077621 1419436047 NA NA 2014-11-21T20:40:09.187 2015-04-22T16:37:08.663 2015-04-22T16:41:02.403 50 GSM1552809 SRR1660338.bw HERV-K Rec siRNA NCCIT c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750221 SRX765944 SRR1660339 27915936 27915936 1 FALSE FALSE 26967424 1322521876 NA NA 2014-11-21T20:40:16.833 2015-04-22T16:37:10.663 2015-04-22T16:41:02.120 50 GSM1552810 SRR1660339.bw Control siRNA NCCIT c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750221 SRX765944 SRR1660340 22394023 22394023 1 FALSE FALSE 21776889 1067600401 NA NA 2014-11-21T20:40:16.833 2015-04-22T16:37:10.663 2015-04-22T16:41:02.120 50 GSM1552810 SRR1660340.bw Control siRNA NCCIT c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750221 SRX765944 SRR1660341 22809017 22809017 1 FALSE FALSE 21470647 1054031582 NA NA 2014-11-21T20:40:16.833 2015-04-22T16:37:10.663 2015-04-22T16:41:02.120 50 GSM1552810 SRR1660341.bw Control siRNA NCCIT c("cell type: NCCIT cells, hECC", "Sex: male") SRP050147 SRS750222 SRX765945 SRR1660342 64872002 64872002 1 TRUE FALSE 41690640 3956763997 NA NA 2014-11-21T20:40:21.367 2015-04-24T12:17:18.697 2015-04-24T12:21:15.287 200 GSM1552811 SRR1660342.bw Naïve ELF1 hESC c("cell type: naive hESC", "Sex: female") SRP050147 SRS750222 SRX765945 SRR1660343 68970622 68970622 1 TRUE FALSE 48636828 4660599682 NA NA 2014-11-21T20:40:21.367 2015-04-24T12:17:18.697 2015-04-24T12:21:15.287 200 GSM1552811 SRR1660343.bw Naïve ELF1 hESC c("cell type: naive hESC", "Sex: female") SRP050147 SRS750222 SRX765945 SRR1660344 50927788 50927788 1 TRUE FALSE 33803548 3210714250 NA NA 2014-11-21T20:40:21.367 2015-04-24T12:17:18.697 2015-04-24T12:21:15.287 200 GSM1552811 SRR1660344.bw Naïve ELF1 hESC c("cell type: naive hESC", "Sex: female") SRP050147 SRS750223 SRX765946 SRR1660345 67938000 67938000 1 TRUE FALSE 54888421 5349764311 NA NA 2014-11-21T20:40:23.713 2015-04-22T16:37:13.130 2015-04-22T16:41:01.943 200 GSM1552812 SRR1660345.bw Primed ELF1 hESC c("cell type: primed hESC", "Sex: female") SRP050147 SRS750223 SRX765946 SRR1660346 56905288 56905288 1 TRUE FALSE 45960482 4470005163 NA NA 2014-11-21T20:40:23.713 2015-04-22T16:37:13.130 2015-04-22T16:41:01.943 200 GSM1552812 SRR1660346.bw Primed ELF1 hESC c("cell type: primed hESC", "Sex: female") SRP050147 SRS750223 SRX765946 SRR1660347 55962422 55962422 1 TRUE FALSE 45046238 4386378847 NA NA 2014-11-21T20:40:23.713 2015-04-22T16:37:13.130 2015-04-22T16:41:01.943 200 GSM1552812 SRR1660347.bw Primed ELF1 hESC c("cell type: primed hESC", "Sex: female") SRP050147 SRS827481 SRX853388 SRR1773506 20878204 20878204 1 FALSE FALSE 20107693 774172818 NA NA 2015-01-27T08:15:11.367 2015-04-22T16:39:37.370 2015-04-22T16:43:16.190 39 GSM1592570 SRR1773506.bw Rec-OE NCCIT total RNA rep1 c("gender: male", "cell type: NCCIT cells, hECC", "molecule subtype: total RNA (rRNA depleted)") SRP050147 SRS827483 SRX853389 SRR1773507 13932656 13932656 1 FALSE FALSE 13486718 530687099 NA NA 2015-01-27T08:15:16.767 2015-04-22T16:39:38.797 2015-04-22T16:43:15.553 40 GSM1592571 SRR1773507.bw Rec-OE NCCIT total RNA rep2 c("gender: male", "cell type: NCCIT cells, hECC", "molecule subtype: total RNA (rRNA depleted)") SRP050147 SRS827484 SRX853391 SRR1773509 21613136 21613136 1 FALSE FALSE 20955673 817558621 NA NA 2015-01-27T08:15:19.457 2015-04-22T16:36:11.930 2015-04-22T16:40:55.630 40 GSM1592573 SRR1773509.bw WT control NCCIT total RNA rep2 c("gender: male", "cell type: NCCIT cells, hECC", "molecule subtype: total RNA (rRNA depleted)") SRP050147 SRS827485 SRX853390 SRR1773508 13943094 13943094 1 FALSE FALSE 13528403 518222488 NA NA 2015-01-27T08:15:14.147 2015-04-22T16:36:10.040 2015-04-22T16:40:55.327 39 GSM1592572 SRR1773508.bw WT control NCCIT total RNA rep1 c("gender: male", "cell type: NCCIT cells, hECC", "molecule subtype: total RNA (rRNA depleted)")