project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP050193 SRS1021799 SRX1130271 SRR2141558 46910187 46910187 1 FALSE FALSE 46213363 1839189507 NA NA 2015-08-03T12:31:50.000 2016-01-08T01:42:45.330 2016-01-08T01:46:14.443 40 GSM1842500 SRR2141558.bw SUM149_JQ1_12H_R2 c("cell line: SUM149", "drug treatment: JQ1", "duration: 12h", "barcode (already removed): TGACCA") SRP050193 SRS1021800 SRX1130270 SRR2141557 44775049 44775049 1 FALSE FALSE 44228324 1760032367 NA NA 2015-08-03T12:31:49.000 2016-01-08T01:42:44.487 2016-01-08T01:46:14.203 40 GSM1842499 SRR2141557.bw SUM149_JQ1_12H_R1 c("cell line: SUM149", "drug treatment: JQ1", "duration: 12h", "barcode (already removed): CGATGT") SRP050193 SRS1021801 SRX1130269 SRR2141556 37521331 37521331 1 FALSE FALSE 37109087 1477122270 NA NA 2015-08-03T12:31:48.000 2016-01-08T01:42:43.567 2016-01-08T01:46:13.977 40 GSM1842498 SRR2141556.bw SUM149_DMSO_12H_R2 c("cell line: SUM149", "drug treatment: DMSO", "duration: 12h", "barcode (already removed): GTGAAA") SRP050193 SRS1021802 SRX1130268 SRR2141555 54193519 54193519 1 FALSE FALSE 53673509 2136631618 NA NA 2015-08-03T12:31:47.000 2016-01-08T01:42:42.667 2016-01-08T01:46:13.750 40 GSM1842497 SRR2141555.bw SUM149_DMSO_12H_R1 c("cell line: SUM149", "drug treatment: DMSO", "duration: 12h", "barcode (already removed): GTCCGC") SRP050193 SRS1021803 SRX1130267 SRR2141554 42738650 42738650 1 FALSE FALSE 42296340 1683434928 NA NA 2015-08-03T12:31:46.000 2016-01-08T01:42:41.760 2016-01-08T01:46:13.523 40 GSM1842496 SRR2141554.bw SUM149R_JQ1_12H_R2 c("cell line: SUM149R", "drug treatment: JQ1", "duration: 12h", "barcode (already removed): GCCAAT") SRP050193 SRS1021804 SRX1130266 SRR2141553 52322746 52322746 1 FALSE FALSE 51554437 2049716920 NA NA 2015-08-03T12:30:47.000 2016-01-08T01:42:40.907 2016-01-08T01:46:13.297 40 GSM1842495 SRR2141553.bw SUM149R_JQ1_12H_R1 c("cell line: SUM149R", "drug treatment: JQ1", "duration: 12h", "barcode (already removed): CAGATC") SRP050193 SRS1021805 SRX1130265 SRR2141552 49100007 49100007 1 FALSE FALSE 48547458 1932975689 NA NA 2015-08-03T12:30:45.000 2016-01-08T01:42:39.993 2016-01-08T01:46:13.070 40 GSM1842494 SRR2141552.bw SUM149R_DMSO_12H_R2 c("cell line: SUM149R", "drug treatment: DMSO", "duration: 12h", "barcode (already removed): ACAGTG") SRP050193 SRS1021806 SRX1130264 SRR2141551 52233964 52233964 1 FALSE FALSE 51390513 2043098251 NA NA 2015-08-03T12:30:44.000 2016-01-08T01:42:38.507 2016-01-08T01:46:12.833 40 GSM1842493 SRR2141551.bw SUM149R_DMSO_12H_R1 c("cell line: SUM149R", "drug treatment: DMSO", "duration: 12h", "barcode (already removed): ACAGTG") SRP050193 SRS751139 SRX767004 SRR1661332 43554379 43554379 1 FALSE FALSE 43282389 2154919695 NA NA 2014-11-24T11:06:30.443 2016-01-08T01:18:30.393 2016-01-08T01:22:14.053 50 GSM1553144 SRR1661332.bw SUM159R_DMSO_24H_1 c("cell line: SUM159R", "drug treatment: DMSO", "duration: 24h", "barcode (already removed): CCGTCC") SRP050193 SRS751140 SRX767005 SRR1661333 28277603 28277603 1 FALSE FALSE 28119244 1399487075 NA NA 2014-11-24T11:05:59.310 2016-01-08T01:18:31.263 2016-01-08T01:22:13.793 50 GSM1553145 SRR1661333.bw SUM159R_DMSO_24H_2 c("cell line: SUM159R", "drug treatment: DMSO", "duration: 24h", "barcode (already removed): AGTTCC") SRP050193 SRS751141 SRX767006 SRR1661334 44904714 44904714 1 FALSE FALSE 44653080 2222858358 NA NA 2014-11-24T11:06:02.290 2016-01-08T01:18:32.073 2016-01-08T01:22:13.540 50 GSM1553146 SRR1661334.bw SUM159R_DMSO_3H_1 c("cell line: SUM159R", "drug treatment: DMSO", "duration: 3h", "barcode (already removed): GCCAAT") SRP050193 SRS751142 SRX767007 SRR1661335 50115918 50115918 1 FALSE FALSE 49808924 2479229044 NA NA 2014-11-24T11:05:54.277 2016-01-08T01:18:32.953 2016-01-08T01:22:13.313 50 GSM1553147 SRR1661335.bw SUM159R_DMSO_3H_2 c("cell line: SUM159R", "drug treatment: DMSO", "duration: 3h", "barcode (already removed): CTTGTA") SRP050193 SRS751143 SRX767008 SRR1661336 61426359 61426359 1 FALSE FALSE 61072848 3040416168 NA NA 2014-11-24T11:06:22.947 2016-01-08T01:18:34.037 2016-01-08T01:22:13.087 50 GSM1553148 SRR1661336.bw SUM159R_JQ1_24H_1 c("cell line: SUM159R", "drug treatment: JQ1", "duration: 24h", "barcode (already removed): GTCCGC") SRP050193 SRS751144 SRX767009 SRR1661337 34213025 34213025 1 FALSE FALSE 33840253 1683578749 NA NA 2014-11-24T11:06:12.857 2016-01-08T01:18:35.103 2016-01-08T01:22:12.870 50 GSM1553149 SRR1661337.bw SUM159R_JQ1_24H_2 c("cell line: SUM159R", "drug treatment: JQ1", "duration: 24h", "barcode (already removed): ATGTCA") SRP050193 SRS751145 SRX767010 SRR1661338 40776153 40776153 1 FALSE FALSE 40399467 2011000846 NA NA 2014-11-24T11:06:43.177 2016-01-08T01:18:36.127 2016-01-08T01:22:12.607 50 GSM1553150 SRR1661338.bw SUM159R_JQ1_3H_1 c("cell line: SUM159R", "drug treatment: JQ1", "duration: 3h", "barcode (already removed): AGTCAA") SRP050193 SRS751146 SRX767011 SRR1661339 42384359 42384359 1 FALSE FALSE 42082058 2094971334 NA NA 2014-11-24T11:06:18.133 2016-01-08T01:18:37.187 2016-01-08T01:22:12.360 50 GSM1553151 SRR1661339.bw SUM159R_JQ1_3H_2 c("cell line: SUM159R", "drug treatment: JQ1", "duration: 3h", "barcode (already removed): AGTTCC") SRP050193 SRS751147 SRX767012 SRR1661340 45571253 45571253 1 FALSE FALSE 45216680 2252371419 NA NA 2014-11-24T11:05:56.913 2016-01-08T01:18:38.417 2016-01-08T01:22:12.100 50 GSM1553152 SRR1661340.bw SUM159_DMSO_12H_1 c("cell line: SUM159", "drug treatment: DMSO", "duration: 12h", "barcode (already removed): AGTTCC") SRP050193 SRS751148 SRX767013 SRR1661341 42386757 42386757 1 FALSE FALSE 42081362 2094281633 NA NA 2014-11-24T11:06:07.557 2016-01-08T01:18:39.617 2016-01-08T01:22:11.870 50 GSM1553153 SRR1661341.bw SUM159_DMSO_12H_2 c("cell line: SUM159", "drug treatment: DMSO", "duration: 12h", "barcode (already removed): ACAGTG") SRP050193 SRS751149 SRX767014 SRR1661342 17872256 17872256 1 FALSE FALSE 17621257 875333418 NA NA 2014-11-24T11:06:38.180 2016-01-08T01:18:41.450 2016-01-08T01:22:11.613 50 GSM1553154 SRR1661342.bw SUM159_DMSO_24H_1 c("cell line: SUM159", "drug treatment: DMSO", "duration: 24h", "barcode (already removed): CTTGTA") SRP050193 SRS751150 SRX767015 SRR1661343 40740514 40740514 1 FALSE FALSE 40298996 2006294957 NA NA 2014-11-24T11:06:33.260 2016-01-08T01:18:43.447 2016-01-08T01:22:11.333 50 GSM1553155 SRR1661343.bw SUM159_DMSO_24H_2 c("cell line: SUM159", "drug treatment: DMSO", "duration: 24h", "barcode (already removed): ATGTCA") SRP050193 SRS751151 SRX767016 SRR1661344 47020376 47020376 1 FALSE FALSE 46839586 2333036299 NA NA 2014-11-24T11:06:20.477 2016-01-08T01:18:44.790 2016-01-08T01:22:11.120 50 GSM1553156 SRR1661344.bw SUM159_DMSO_3H_1 c("cell line: SUM159", "drug treatment: DMSO", "duration: 3h", "barcode (already removed): CTTGTA") SRP050193 SRS751152 SRX767017 SRR1661345 25309445 25309445 1 FALSE FALSE 24836937 1236508400 NA NA 2014-11-24T11:05:51.740 2016-01-08T01:18:45.643 2016-01-08T01:22:10.890 50 GSM1553157 SRR1661345.bw SUM159_DMSO_3H_2 c("cell line: SUM159", "drug treatment: DMSO", "duration: 3h", "barcode (already removed): CGATGT") SRP050193 SRS751153 SRX767018 SRR1661346 46349345 46349345 1 FALSE FALSE 46149158 2299093815 NA NA 2014-11-24T11:06:04.907 2016-01-08T01:18:46.463 2016-01-08T01:22:10.657 50 GSM1553158 SRR1661346.bw SUM159_JQ1_12H_1 c("cell line: SUM159", "drug treatment: JQ1", "duration: 12h", "barcode (already removed): ATGTCA") SRP050193 SRS751154 SRX767019 SRR1661347 44056366 44056366 1 FALSE FALSE 43689479 2173813784 NA NA 2014-11-24T11:05:46.700 2016-01-08T01:18:47.250 2016-01-08T01:22:10.430 50 GSM1553159 SRR1661347.bw SUM159_JQ1_12H_2 c("cell line: SUM159", "drug treatment: JQ1", "duration: 12h", "barcode (already removed): GCCAAT") SRP050193 SRS751155 SRX767020 SRR1661348 24771472 24771472 1 FALSE FALSE 24637155 1226345150 NA NA 2014-11-24T11:06:35.747 2016-01-08T01:18:48.067 2016-01-08T01:22:10.200 50 GSM1553160 SRR1661348.bw SUM159_JQ1_24H_1 c("cell line: SUM159", "drug treatment: JQ1", "duration: 24h", "barcode (already removed): AGTCAA") SRP050193 SRS751156 SRX767021 SRR1661349 22453644 22453644 1 FALSE FALSE 22257300 1107218988 NA NA 2014-11-24T11:06:40.690 2016-01-08T01:18:48.867 2016-01-08T01:22:09.987 50 GSM1553161 SRR1661349.bw SUM159_JQ1_24H_2 c("cell line: SUM159", "drug treatment: JQ1", "duration: 24h", "barcode (already removed): CCGTCC") SRP050193 SRS751157 SRX767022 SRR1661350 45018143 45018143 1 FALSE FALSE 44559002 2220802973 NA NA 2014-11-24T11:06:25.230 2016-01-08T01:18:49.847 2016-01-08T01:22:09.760 50 GSM1553162 SRR1661350.bw SUM159_JQ1_3H_1 c("cell line: SUM159", "drug treatment: JQ1", "duration: 3h", "barcode (already removed): AGTCAA") SRP050193 SRS751158 SRX767023 SRR1661351 33047923 33047923 1 FALSE FALSE 32682630 1624525752 NA NA 2014-11-24T11:06:15.133 2016-01-08T01:17:06.783 2016-01-08T01:22:09.507 50 GSM1553163 SRR1661351.bw SUM159_JQ1_3H_2 c("cell line: SUM159", "drug treatment: JQ1", "duration: 3h", "barcode (already removed): TGACCA")