project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP050331 SRS753948 SRX769798 SRR1664821 5755391 5755391 1 FALSE FALSE 5649898 224990440 NA NA 2014-11-28T11:40:53.330 2015-11-19T01:16:06.987 2015-11-19T01:17:20.573 40 GSM1555721 SRR1664821.bw CHKA knockdown in C4-2 cell rep 1 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753948 SRX769798 SRR1664822 5774909 5774909 1 FALSE FALSE 5668499 225754129 NA NA 2014-11-28T11:40:53.330 2015-11-19T01:16:06.987 2015-11-19T01:17:20.573 40 GSM1555721 SRR1664822.bw CHKA knockdown in C4-2 cell rep 1 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753948 SRX769798 SRR1664823 5766666 5766666 1 FALSE FALSE 5661161 225461023 NA NA 2014-11-28T11:40:53.330 2015-11-19T01:16:06.987 2015-11-19T01:17:20.573 40 GSM1555721 SRR1664823.bw CHKA knockdown in C4-2 cell rep 1 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753948 SRX769798 SRR1664824 5953740 5953740 1 FALSE FALSE 5844476 232758152 NA NA 2014-11-28T11:40:53.330 2015-11-19T01:16:06.987 2015-11-19T01:17:20.573 40 GSM1555721 SRR1664824.bw CHKA knockdown in C4-2 cell rep 1 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753949 SRX769799 SRR1664825 6781074 6781074 1 FALSE FALSE 6658211 265176868 NA NA 2014-11-28T11:41:23.047 2015-11-19T01:16:07.983 2015-11-19T01:17:20.357 40 GSM1555722 SRR1664825.bw CHKA knockdown in C4-2 cell rep 2 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753949 SRX769799 SRR1664826 6805448 6805448 1 FALSE FALSE 6682480 266164334 NA NA 2014-11-28T11:41:23.047 2015-11-19T01:16:07.983 2015-11-19T01:17:20.357 40 GSM1555722 SRR1664826.bw CHKA knockdown in C4-2 cell rep 2 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753949 SRX769799 SRR1664827 6792897 6792897 1 FALSE FALSE 6671098 265719201 NA NA 2014-11-28T11:41:23.047 2015-11-19T01:16:07.983 2015-11-19T01:17:20.357 40 GSM1555722 SRR1664827.bw CHKA knockdown in C4-2 cell rep 2 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753949 SRX769799 SRR1664828 7009769 7009769 1 FALSE FALSE 6882611 274133257 NA NA 2014-11-28T11:41:23.047 2015-11-19T01:16:07.983 2015-11-19T01:17:20.357 40 GSM1555722 SRR1664828.bw CHKA knockdown in C4-2 cell rep 2 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753950 SRX769800 SRR1664829 6356614 6356614 1 FALSE FALSE 6229528 248033464 NA NA 2014-11-28T11:40:46.027 2015-11-19T01:16:08.810 2015-11-19T01:17:20.080 40 GSM1555723 SRR1664829.bw CHKA knockdown in C4-2 cell rep 3 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753950 SRX769800 SRR1664830 6331944 6331944 1 FALSE FALSE 6205172 247073131 NA NA 2014-11-28T11:40:46.027 2015-11-19T01:16:08.810 2015-11-19T01:17:20.080 40 GSM1555723 SRR1664830.bw CHKA knockdown in C4-2 cell rep 3 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753950 SRX769800 SRR1664831 6342734 6342734 1 FALSE FALSE 6215990 247512460 NA NA 2014-11-28T11:40:46.027 2015-11-19T01:16:08.810 2015-11-19T01:17:20.080 40 GSM1555723 SRR1664831.bw CHKA knockdown in C4-2 cell rep 3 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753950 SRX769800 SRR1664832 6370095 6370095 1 FALSE FALSE 6242239 248554615 NA NA 2014-11-28T11:40:46.027 2015-11-19T01:16:08.810 2015-11-19T01:17:20.080 40 GSM1555723 SRR1664832.bw CHKA knockdown in C4-2 cell rep 3 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753951 SRX769801 SRR1664833 5875305 5875305 1 FALSE FALSE 5758247 229292111 NA NA 2014-11-28T11:41:09.063 2015-11-19T01:16:09.750 2015-11-19T01:22:15.133 40 GSM1555724 SRR1664833.bw CHKA knockdown in C4-2 cell rep 4 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753951 SRX769801 SRR1664834 5830953 5830953 1 FALSE FALSE 5714499 227562743 NA NA 2014-11-28T11:41:09.063 2015-11-19T01:16:09.750 2015-11-19T01:22:15.133 40 GSM1555724 SRR1664834.bw CHKA knockdown in C4-2 cell rep 4 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753951 SRX769801 SRR1664835 5851763 5851763 1 FALSE FALSE 5735774 228417676 NA NA 2014-11-28T11:41:09.063 2015-11-19T01:16:09.750 2015-11-19T01:22:15.133 40 GSM1555724 SRR1664835.bw CHKA knockdown in C4-2 cell rep 4 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753951 SRX769801 SRR1664836 5843046 5843046 1 FALSE FALSE 5727242 228070239 NA NA 2014-11-28T11:41:09.063 2015-11-19T01:16:09.750 2015-11-19T01:22:15.133 40 GSM1555724 SRR1664836.bw CHKA knockdown in C4-2 cell rep 4 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753952 SRX769802 SRR1664837 4026134 4026134 1 FALSE FALSE 3942662 157013814 NA NA 2014-11-28T11:41:15.760 2015-11-19T01:16:10.787 2015-11-19T01:22:14.807 40 GSM1555725 SRR1664837.bw CHKA knockdown in C4-2 cell rep 5 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753952 SRX769802 SRR1664838 4022214 4022214 1 FALSE FALSE 3938663 156865940 NA NA 2014-11-28T11:41:15.760 2015-11-19T01:16:10.787 2015-11-19T01:22:14.807 40 GSM1555725 SRR1664838.bw CHKA knockdown in C4-2 cell rep 5 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753952 SRX769802 SRR1664839 4009690 4009690 1 FALSE FALSE 3927109 156412276 NA NA 2014-11-28T11:41:15.760 2015-11-19T01:16:10.787 2015-11-19T01:22:14.807 40 GSM1555725 SRR1664839.bw CHKA knockdown in C4-2 cell rep 5 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753952 SRX769802 SRR1664840 4064577 4064577 1 FALSE FALSE 3980770 158536352 NA NA 2014-11-28T11:41:15.760 2015-11-19T01:16:10.787 2015-11-19T01:22:14.807 40 GSM1555725 SRR1664840.bw CHKA knockdown in C4-2 cell rep 5 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753953 SRX769803 SRR1664841 6426819 6426819 1 FALSE FALSE 6304699 251054181 NA NA 2014-11-28T11:40:55.573 2015-11-19T01:15:25.387 2015-11-19T01:17:19.763 40 GSM1555726 SRR1664841.bw CHKA knockdown in C4-2 cell rep 6 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753953 SRX769803 SRR1664842 6351207 6351207 1 FALSE FALSE 6231198 248149356 NA NA 2014-11-28T11:40:55.573 2015-11-19T01:15:25.387 2015-11-19T01:17:19.763 40 GSM1555726 SRR1664842.bw CHKA knockdown in C4-2 cell rep 6 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753953 SRX769803 SRR1664843 6397655 6397655 1 FALSE FALSE 6277374 249990233 NA NA 2014-11-28T11:40:55.573 2015-11-19T01:15:25.387 2015-11-19T01:17:19.763 40 GSM1555726 SRR1664843.bw CHKA knockdown in C4-2 cell rep 6 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753953 SRX769803 SRR1664844 6315034 6315034 1 FALSE FALSE 6195806 246732402 NA NA 2014-11-28T11:40:55.573 2015-11-19T01:15:25.387 2015-11-19T01:17:19.763 40 GSM1555726 SRR1664844.bw CHKA knockdown in C4-2 cell rep 6 c("sample group: SiCHKA", "antibodies: anti-CHKA (Sigma) cat no. HPA024153", "cell line: C4-2") SRP050331 SRS753954 SRX769804 SRR1664845 4080947 4080947 1 FALSE FALSE 3961743 157763926 NA NA 2014-11-28T11:40:43.673 2015-11-19T01:15:27.273 2015-11-19T01:17:19.530 40 GSM1555727 SRR1664845.bw non-targeting siRNA in C4-2 cell rep 1 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753954 SRX769804 SRR1664846 4055386 4055386 1 FALSE FALSE 3936943 156787548 NA NA 2014-11-28T11:40:43.673 2015-11-19T01:15:27.273 2015-11-19T01:17:19.530 40 GSM1555727 SRR1664846.bw non-targeting siRNA in C4-2 cell rep 1 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753954 SRX769804 SRR1664847 4063384 4063384 1 FALSE FALSE 3944843 157108104 NA NA 2014-11-28T11:40:43.673 2015-11-19T01:15:27.273 2015-11-19T01:17:19.530 40 GSM1555727 SRR1664847.bw non-targeting siRNA in C4-2 cell rep 1 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753954 SRX769804 SRR1664848 4051509 4051509 1 FALSE FALSE 3932982 156630667 NA NA 2014-11-28T11:40:43.673 2015-11-19T01:15:27.273 2015-11-19T01:17:19.530 40 GSM1555727 SRR1664848.bw non-targeting siRNA in C4-2 cell rep 1 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753955 SRX769805 SRR1664849 7950602 7950602 1 FALSE FALSE 7710250 306988174 NA NA 2014-11-28T11:40:57.800 2015-11-19T01:15:28.220 2015-11-19T01:17:19.323 40 GSM1555728 SRR1664849.bw non-targeting siRNA in C4-2 cell rep 2 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753955 SRX769805 SRR1664850 7907650 7907650 1 FALSE FALSE 7667513 305306960 NA NA 2014-11-28T11:40:57.800 2015-11-19T01:15:28.220 2015-11-19T01:17:19.323 40 GSM1555728 SRR1664850.bw non-targeting siRNA in C4-2 cell rep 2 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753955 SRX769805 SRR1664851 7924460 7924460 1 FALSE FALSE 7685904 306044093 NA NA 2014-11-28T11:40:57.800 2015-11-19T01:15:28.220 2015-11-19T01:17:19.323 40 GSM1555728 SRR1664851.bw non-targeting siRNA in C4-2 cell rep 2 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753955 SRX769805 SRR1664852 7918564 7918564 1 FALSE FALSE 7679384 305782058 NA NA 2014-11-28T11:40:57.800 2015-11-19T01:15:28.220 2015-11-19T01:17:19.323 40 GSM1555728 SRR1664852.bw non-targeting siRNA in C4-2 cell rep 2 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753956 SRX769806 SRR1664853 5680699 5680699 1 FALSE FALSE 5509508 219365436 NA NA 2014-11-28T11:41:20.000 2015-11-19T01:15:29.167 2015-11-19T01:17:19.120 40 GSM1555729 SRR1664853.bw non-targeting siRNA in C4-2 cell rep 3 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753956 SRX769806 SRR1664854 5643559 5643559 1 FALSE FALSE 5473807 217960582 NA NA 2014-11-28T11:41:20.000 2015-11-19T01:15:29.167 2015-11-19T01:17:19.120 40 GSM1555729 SRR1664854.bw non-targeting siRNA in C4-2 cell rep 3 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753956 SRX769806 SRR1664855 5652814 5652814 1 FALSE FALSE 5483109 218333004 NA NA 2014-11-28T11:41:20.000 2015-11-19T01:15:29.167 2015-11-19T01:17:19.120 40 GSM1555729 SRR1664855.bw non-targeting siRNA in C4-2 cell rep 3 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753956 SRX769806 SRR1664856 5721229 5721229 1 FALSE FALSE 5549760 220980320 NA NA 2014-11-28T11:41:20.000 2015-11-19T01:15:29.167 2015-11-19T01:17:19.120 40 GSM1555729 SRR1664856.bw non-targeting siRNA in C4-2 cell rep 3 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753957 SRX769807 SRR1664857 5344554 5344554 1 FALSE FALSE 5216390 207765373 NA NA 2014-11-28T11:41:17.913 2015-11-19T01:15:29.963 2015-11-19T01:17:18.893 40 GSM1555730 SRR1664857.bw non-targeting siRNA in C4-2 cell rep 4 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753957 SRX769807 SRR1664858 5323398 5323398 1 FALSE FALSE 5195488 206958650 NA NA 2014-11-28T11:41:17.913 2015-11-19T01:15:29.963 2015-11-19T01:17:18.893 40 GSM1555730 SRR1664858.bw non-targeting siRNA in C4-2 cell rep 4 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753957 SRX769807 SRR1664859 5335523 5335523 1 FALSE FALSE 5208376 207471874 NA NA 2014-11-28T11:41:17.913 2015-11-19T01:15:29.963 2015-11-19T01:17:18.893 40 GSM1555730 SRR1664859.bw non-targeting siRNA in C4-2 cell rep 4 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753957 SRX769807 SRR1664860 5364228 5364228 1 FALSE FALSE 5235958 208562403 NA NA 2014-11-28T11:41:17.913 2015-11-19T01:15:29.963 2015-11-19T01:17:18.893 40 GSM1555730 SRR1664860.bw non-targeting siRNA in C4-2 cell rep 4 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753958 SRX769808 SRR1664861 5780109 5780109 1 FALSE FALSE 5599921 222927102 NA NA 2014-11-28T11:41:13.723 2015-11-19T01:15:30.777 2015-11-19T01:17:18.560 40 GSM1555731 SRR1664861.bw non-targeting siRNA in C4-2 cell rep 5 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753958 SRX769808 SRR1664862 5766660 5766660 1 FALSE FALSE 5586960 222432526 NA NA 2014-11-28T11:41:13.723 2015-11-19T01:15:30.777 2015-11-19T01:17:18.560 40 GSM1555731 SRR1664862.bw non-targeting siRNA in C4-2 cell rep 5 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753958 SRX769808 SRR1664863 5772204 5772204 1 FALSE FALSE 5592814 222672003 NA NA 2014-11-28T11:41:13.723 2015-11-19T01:15:30.777 2015-11-19T01:17:18.560 40 GSM1555731 SRR1664863.bw non-targeting siRNA in C4-2 cell rep 5 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753958 SRX769808 SRR1664864 5835390 5835390 1 FALSE FALSE 5654083 225101309 NA NA 2014-11-28T11:41:13.723 2015-11-19T01:15:30.777 2015-11-19T01:17:18.560 40 GSM1555731 SRR1664864.bw non-targeting siRNA in C4-2 cell rep 5 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753959 SRX769809 SRR1664865 3448910 3448910 1 FALSE FALSE 3345337 133173757 NA NA 2014-11-28T11:41:06.830 2015-11-19T01:15:31.597 2015-11-19T01:17:18.293 40 GSM1555732 SRR1664865.bw non-targeting siRNA in C4-2 cell rep 6 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753959 SRX769809 SRR1664866 3455146 3455146 1 FALSE FALSE 3352089 133450250 NA NA 2014-11-28T11:41:06.830 2015-11-19T01:15:31.597 2015-11-19T01:17:18.293 40 GSM1555732 SRR1664866.bw non-targeting siRNA in C4-2 cell rep 6 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753959 SRX769809 SRR1664867 3453076 3453076 1 FALSE FALSE 3350692 133395632 NA NA 2014-11-28T11:41:06.830 2015-11-19T01:15:31.597 2015-11-19T01:17:18.293 40 GSM1555732 SRR1664867.bw non-targeting siRNA in C4-2 cell rep 6 c("sample group: SiNTCONTROL", "cell line: C4-2") SRP050331 SRS753959 SRX769809 SRR1664868 3550496 3550496 1 FALSE FALSE 3445051 137153331 NA NA 2014-11-28T11:41:06.830 2015-11-19T01:15:31.597 2015-11-19T01:17:18.293 40 GSM1555732 SRR1664868.bw non-targeting siRNA in C4-2 cell rep 6 c("sample group: SiNTCONTROL", "cell line: C4-2")