project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP050551 SRS779728 SRX796283 SRR1693455 87388448 86246205 0.986929130496 TRUE FALSE 86225267 8405371544 NA NA 2014-12-04T11:40:14.313 2015-05-23T01:43:41.500 2015-05-23T01:50:05.100 192 GSM1558607 SRR1693455.bw P4_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779730 SRX796284 SRR1693456 75850906 74801255 0.986161655076 TRUE FALSE 74783635 7284301350 NA NA 2014-12-04T11:40:51.780 2015-05-23T01:45:35.530 2015-05-23T01:50:04.223 192 GSM1558608 SRR1693456.bw P4_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779738 SRX796293 SRR1693465 63048658 62072054 0.984510312654 TRUE FALSE 62053604 5992231530 NA NA 2014-12-04T11:45:51.060 2015-05-23T01:44:28.643 2015-05-23T01:50:00.287 190 GSM1558617 SRR1693465.bw P9_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779739 SRX796294 SRR1693466 57526316 56618725 0.984223029335 TRUE FALSE 56601646 5457161515 NA NA 2014-12-04T11:45:48.750 2015-05-23T01:44:30.260 2015-05-23T01:49:59.967 190 GSM1558618 SRR1693466.bw P9_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779734 SRX796289 SRR1693461 65330966 64235946 0.983238882462 TRUE FALSE 64221847 6222099967 NA NA 2014-12-04T11:41:02.983 2015-05-23T01:44:20.327 2015-05-23T01:50:02.333 190 GSM1558613 SRR1693461.bw P7_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779735 SRX796290 SRR1693462 60396234 59260991 0.981203414107 TRUE FALSE 59246750 5723256468 NA NA 2014-12-04T11:41:00.120 2015-05-23T01:44:22.273 2015-05-23T01:50:02.040 189 GSM1558614 SRR1693462.bw P7_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779741 SRX796295 SRR1693467 48177958 47260318 0.980953115531 TRUE FALSE 47242307 4560463481 NA NA 2014-12-04T11:45:56.120 2015-05-23T01:44:31.337 2015-05-23T01:49:59.140 189 GSM1558619 SRR1693467.bw P10_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779733 SRX796287 SRR1693459 64919508 63672468 0.980790981965 TRUE FALSE 63657826 6168494245 NA NA 2014-12-04T11:40:57.723 2015-05-23T01:44:16.600 2015-05-23T01:50:03.103 190 GSM1558611 SRR1693459.bw P6_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779736 SRX796291 SRR1693463 56361622 55268242 0.980600629272 TRUE FALSE 55247920 5328737744 NA NA 2014-12-04T11:45:07.223 2015-05-23T01:44:23.767 2015-05-23T01:50:01.690 189 GSM1558615 SRR1693463.bw P8_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779740 SRX796296 SRR1693468 50008170 48990413 0.979648185486 TRUE FALSE 48971433 4717146296 NA NA 2014-12-04T11:45:36.827 2015-05-23T01:44:32.940 2015-05-23T01:49:59.580 188 GSM1558620 SRR1693468.bw P10_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779729 SRX796285 SRR1693457 60103518 58849271 0.979131887089 TRUE FALSE 58826689 5647662945 NA NA 2014-12-04T11:41:05.337 2015-05-23T01:45:37.547 2015-05-23T01:50:04.763 188 GSM1558609 SRR1693457.bw P5_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779744 SRX796298 SRR1693470 62580562 61241947 0.978609731884 TRUE FALSE 61213180 5903294857 NA NA 2014-12-04T11:45:53.713 2015-05-23T01:44:37.053 2015-05-23T01:49:58.327 188 GSM1558622 SRR1693470.bw P11_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779742 SRX796297 SRR1693469 57083122 55835647 0.978146342451 TRUE FALSE 55809842 5399377163 NA NA 2014-12-04T11:45:46.620 2015-05-23T01:44:34.817 2015-05-23T01:49:58.760 189 GSM1558621 SRR1693469.bw P11_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779743 SRX796299 SRR1693471 42819518 41880384 0.978067618603 TRUE FALSE 41866397 4017894674 NA NA 2014-12-04T11:45:39.297 2015-01-03T00:44:09.053 2015-01-03T01:15:25.607 187 GSM1558623 SRR1693471.bw P12_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779722 SRX796278 SRR1693450 59769370 58419447 0.977414468314 TRUE FALSE 58391886 5555031167 NA NA 2014-12-04T11:40:21.950 2015-05-23T01:45:10.460 2015-05-23T01:50:07.263 186 GSM1558602 SRR1693450.bw P1_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779731 SRX796286 SRR1693458 59995792 58640424 0.977408948948 TRUE FALSE 58617146 5608278966 NA NA 2014-12-04T11:40:54.667 2015-05-23T01:45:38.617 2015-05-23T01:50:03.830 187 GSM1558610 SRR1693458.bw P5_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779737 SRX796292 SRR1693464 45883902 44827072 0.97696730326 TRUE FALSE 44810272 4313333569 NA NA 2014-12-04T11:45:41.637 2015-05-23T01:44:25.987 2015-05-23T01:50:01.307 188 GSM1558616 SRR1693464.bw P8_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779745 SRX796300 SRR1693472 67867768 66304149 0.976960801186 TRUE FALSE 66282254 6318939470 NA NA 2014-12-04T11:45:44.377 2015-01-03T00:44:09.127 2015-01-03T01:15:27.093 186 GSM1558624 SRR1693472.bw P12_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779727 SRX796280 SRR1693452 65012866 63486947 0.976528968897 TRUE FALSE 63471540 6126978205 NA NA 2014-12-04T11:40:19.063 2015-05-23T01:45:13.717 2015-05-23T01:50:05.430 188 GSM1558604 SRR1693452.bw P2_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779723 SRX796277 SRR1693449 58588044 57194252 0.976210299835 TRUE FALSE 57164594 5448114375 NA NA 2014-12-04T11:40:16.767 2015-05-23T01:45:09.363 2015-05-23T01:50:06.843 186 GSM1558601 SRR1693449.bw P1_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779732 SRX796288 SRR1693460 60564858 59098346 0.975786090343 TRUE FALSE 59075807 5683824507 NA NA 2014-12-04T11:41:07.847 2015-05-23T01:44:18.923 2015-05-23T01:50:03.467 187 GSM1558612 SRR1693460.bw P6_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779724 SRX796279 SRR1693451 51425632 50088011 0.973989216117 TRUE FALSE 50070769 4830303245 NA NA 2014-12-04T11:40:26.860 2015-05-23T01:45:12.373 2015-05-23T01:50:06.537 188 GSM1558603 SRR1693451.bw P2_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779725 SRX796281 SRR1693453 46448698 45217167 0.973486210528 TRUE FALSE 45194043 4313349084 NA NA 2014-12-04T11:40:11.840 2015-05-23T01:45:00.737 2015-05-23T01:50:06.180 185 GSM1558605 SRR1693453.bw P3_ANT c("tissue: Adjacent non-tumor", "tumor type: HCC", "tumor stage: III") SRP050551 SRS779726 SRX796282 SRR1693454 50257070 48869564 0.972391824673 TRUE FALSE 48845437 4652423865 NA NA 2014-12-04T11:40:24.330 2015-05-23T01:43:38.830 2015-05-23T01:50:05.793 185 GSM1558606 SRR1693454.bw P3_HCC c("tissue: Hepatocellular carcinoma primary tumor", "tumor type: HCC", "tumor stage: III")