project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP051606 SRS804958 SRX825415 SRR1736482 198025184 198025184 1 TRUE FALSE 181312073 9127574291 NA NA 2014-12-29T16:02:17.867 2016-01-19T01:15:18.490 2016-01-19T01:18:31.123 102 GSM1574293 SRR1736482.bw AsPC1.rep1 c("cell line background: AsPC1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804959 SRX825416 SRR1736483 113938886 113938886 1 TRUE FALSE 108717569 5504931543 NA NA 2014-12-29T16:03:47.890 2016-01-19T01:15:19.353 2016-01-19T01:18:30.340 102 GSM1574294 SRR1736483.bw AsPC1.rep2 c("cell line background: AsPC1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804960 SRX825417 SRR1736484 100178048 100178048 1 TRUE FALSE 95725160 4847325575 NA NA 2014-12-29T16:04:30.127 2016-01-19T01:15:20.283 2016-01-19T01:18:30.150 102 GSM1574295 SRR1736484.bw BxPc3.rep1 c("cell line background: BxPc3", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804961 SRX825418 SRR1736485 110092732 110092732 1 TRUE FALSE 105123895 5324006759 NA NA 2014-12-29T16:01:44.250 2016-01-19T01:15:21.127 2016-01-19T01:18:29.953 102 GSM1574296 SRR1736485.bw BxPc3.rep2 c("cell line background: BxPc3", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804962 SRX825419 SRR1736486 212408774 212408774 1 TRUE FALSE 195024455 9814260726 NA NA 2014-12-29T16:03:54.093 2016-01-19T01:15:21.923 2016-01-19T01:18:29.670 102 GSM1574297 SRR1736486.bw CAPAN1.rep1 c("cell line background: CAPAN1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804963 SRX825420 SRR1736487 112600626 112600626 1 TRUE FALSE 107714380 5453133629 NA NA 2014-12-29T16:02:29.873 2016-01-19T01:15:22.793 2016-01-19T01:18:29.423 102 GSM1574298 SRR1736487.bw CAPAN1.rep2 c("cell line background: CAPAN1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804964 SRX825421 SRR1736488 230246068 230246068 1 TRUE FALSE 200996428 10092196577 NA NA 2014-12-29T16:03:23.747 2016-01-19T01:15:23.603 2016-01-19T01:18:29.210 102 GSM1574299 SRR1736488.bw CAPAN2.rep1 c("cell line background: CAPAN2", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804965 SRX825422 SRR1736489 102694596 102694596 1 TRUE FALSE 98337808 4979987392 NA NA 2014-12-29T16:02:51.563 2016-01-19T01:15:24.433 2016-01-19T01:18:28.893 102 GSM1574300 SRR1736489.bw CAPAN2.rep2 c("cell line background: CAPAN2", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804966 SRX825423 SRR1736490 218104018 218104018 1 TRUE FALSE 190551507 9568863048 NA NA 2014-12-29T16:02:32.127 2016-01-19T01:15:25.200 2016-01-19T01:18:28.690 102 GSM1574301 SRR1736490.bw CFPAC1.rep1 c("cell line background: CFPAC1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804967 SRX825424 SRR1736491 114238318 114238318 1 TRUE FALSE 109516014 5546462973 NA NA 2014-12-29T16:03:21.723 2016-01-19T01:15:26.220 2016-01-19T01:18:28.443 102 GSM1574302 SRR1736491.bw CFPAC1.rep2 c("cell line background: CFPAC1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804969 SRX825426 SRR1736493 108134028 108134028 1 TRUE FALSE 103561482 5245593823 NA NA 2014-12-29T16:04:02.320 2016-01-19T01:15:28.060 2016-01-19T01:18:27.803 102 GSM1574304 SRR1736493.bw HPAF2.rep2 c("cell line background: HPAF2", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804970 SRX825427 SRR1736494 238579892 238579892 1 TRUE FALSE 212533169 10667064218 NA NA 2014-12-29T16:02:13.037 2016-01-19T01:15:28.873 2016-01-19T01:18:26.550 102 GSM1574305 SRR1736494.bw MiaPaca2.rep1 c("cell line background: MiaPaca2", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804972 SRX825430 SRR1736497 106909116 106909116 1 TRUE FALSE 102781499 5208328865 NA NA 2014-12-29T16:03:33.573 2016-01-19T01:15:32.287 2016-01-19T01:18:25.960 102 GSM1574308 SRR1736497.bw PANC1.rep2 c("cell line background: PANC1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804973 SRX825429 SRR1736496 228516248 228516248 1 TRUE FALSE 204249667 10256759966 NA NA 2014-12-29T16:02:38.500 2016-01-19T01:15:31.383 2016-01-19T01:18:25.723 102 GSM1574307 SRR1736496.bw PANC1.rep1 c("cell line background: PANC1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804975 SRX825432 SRR1736499 104637846 104637846 1 TRUE FALSE 100601461 5097064240 NA NA 2014-12-29T16:03:15.267 2016-01-19T01:14:35.537 2016-01-19T01:18:25.150 102 GSM1574310 SRR1736499.bw PT45P1.rep2 c("cell line background: PT45P1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804976 SRX825433 SRR1736500 120254002 120254002 1 TRUE FALSE 116143709 5878924898 NA NA 2014-12-29T16:03:46.000 2016-01-19T01:14:37.153 2016-01-19T01:18:24.940 102 GSM1574311 SRR1736500.bw CFPAC1.Control.rep1 c("cell line background: CFPAC1", "cell type: CFPAC1 clonal cell line", "genotype/variation: wild type clone") SRP051606 SRS804977 SRX825434 SRR1736501 114934724 114934724 1 TRUE FALSE 109294069 5474269194 NA NA 2014-12-29T16:03:49.860 2016-01-19T01:14:38.060 2016-01-19T01:18:24.683 102 GSM1574312 SRR1736501.bw CFPAC1.Control.rep2 c("cell line background: CFPAC1", "cell type: CFPAC1 clonal cell line", "genotype/variation: wild type clone") SRP051606 SRS804978 SRX825435 SRR1736502 99511276 99511276 1 TRUE FALSE 95574212 4741352811 NA NA 2014-12-29T16:04:27.810 2016-01-19T01:14:39.300 2016-01-19T01:18:23.760 102 GSM1574313 SRR1736502.bw CFPAC1.ELF3-KO.rep1 c("cell line background: CFPAC1", "cell type: CFPAC1 genome-edited clonal cell line", "genotype/variation: ELF3-deleted CRISPR-Cas9 clone") SRP051606 SRS804979 SRX825436 SRR1736503 94783678 94783678 1 TRUE FALSE 90417252 4528117261 NA NA 2014-12-29T16:02:27.173 2016-01-19T01:14:40.603 2016-01-19T01:18:23.600 102 GSM1574314 SRR1736503.bw CFPAC1.ELF3-KO.rep2 c("cell line background: CFPAC1", "cell type: CFPAC1 genome-edited clonal cell line", "genotype/variation: ELF3-deleted CRISPR-Cas9 clone") SRP051606 SRS804980 SRX825438 SRR1736505 114909372 114909372 1 TRUE FALSE 109791978 5500657958 NA NA 2014-12-29T16:03:42.047 2016-01-19T01:14:42.550 2016-01-19T01:18:23.340 102 GSM1574316 SRR1736505.bw CFPAC1.KLF5-KO.rep1 c("cell line background: CFPAC1", "cell type: CFPAC1 genome-edited clonal cell line", "genotype/variation: KLF5-deleted CRISPR-Cas9 clone") SRP051606 SRS804981 SRX825437 SRR1736504 91760010 91760010 1 TRUE FALSE 87563432 4343154686 NA NA 2014-12-29T16:03:44.130 2016-01-19T01:14:41.557 2016-01-19T01:18:22.990 102 GSM1574315 SRR1736504.bw CFPAC1.ELF3-KO.rep3 c("cell line background: CFPAC1", "cell type: CFPAC1 genome-edited clonal cell line", "genotype/variation: ELF3-deleted CRISPR-Cas9 clone") SRP051606 SRS804982 SRX825440 SRR1736507 109452204 109452204 1 TRUE FALSE 105883035 5364843455 NA NA 2014-12-29T16:03:39.800 2016-01-19T01:17:31.373 2016-01-19T01:22:45.253 102 GSM1574318 SRR1736507.bw CFPAC1.Control.rep3 c("cell line background: CFPAC1", "cell type: CFPAC1 cells transfected with empty vector", "genotype/variation: empty vector control") SRP051606 SRS804983 SRX825439 SRR1736506 103595692 103595692 1 TRUE FALSE 99271514 4973592352 NA NA 2014-12-29T16:02:05.253 2016-01-19T01:17:30.327 2016-01-19T01:22:44.793 102 GSM1574317 SRR1736506.bw CFPAC1.KLF5-KO.rep2 c("cell line background: CFPAC1", "cell type: CFPAC1 genome-edited clonal cell line", "genotype/variation: KLF5-deleted CRISPR-Cas9 clone") SRP051606 SRS804984 SRX825441 SRR1736508 107491204 107491204 1 TRUE FALSE 104040280 5271664257 NA NA 2014-12-29T16:03:31.390 2016-01-19T01:17:32.180 2016-01-19T01:22:44.613 102 GSM1574319 SRR1736508.bw CFPAC1.Control.rep4 c("cell line background: CFPAC1", "cell type: CFPAC1 cells transfected with empty vector", "genotype/variation: empty vector control") SRP051606 SRS804985 SRX825442 SRR1736509 110855742 110855742 1 TRUE FALSE 107422987 5443831426 NA NA 2014-12-29T16:04:23.580 2016-01-19T01:17:33.210 2016-01-19T01:22:44.417 102 GSM1574320 SRR1736509.bw CFPAC1.ZEB1_OE.rep1 c("cell line background: CFPAC1", "cell type: CFPAC1 cells transfected with ZEB1 expressing vector", "genotype/variation: ectopically expressing ZEB1") SRP051606 SRS804986 SRX825443 SRR1736510 77473914 77473914 1 TRUE FALSE 74900983 3795644632 NA NA 2014-12-29T16:04:13.997 2016-01-19T01:17:34.037 2016-01-19T01:22:44.193 102 GSM1574321 SRR1736510.bw CFPAC1.ZEB1_OE.rep2 c("cell line background: CFPAC1", "cell type: CFPAC1 cells transfected with ZEB1 expressing vector", "genotype/variation: ectopically expressing ZEB1") SRP051606 SRS804968 SRX825425 SRR1736492 207652138 0 0 TRUE FALSE 0 NA NA NA 2014-12-29T16:03:06.047 2016-01-19T01:15:27.177 2016-01-19T01:18:28.133 102 GSM1574303 NA HPAF2.rep1 c("cell line background: HPAF2", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804971 SRX825428 SRR1736495 106697640 0 0 TRUE FALSE 0 NA NA NA 2014-12-29T16:04:19.493 2016-01-19T01:15:30.097 2016-01-19T01:18:26.220 102 GSM1574306 NA MiaPaca2.rep2 c("cell line background: MiaPaca2", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line") SRP051606 SRS804974 SRX825431 SRR1736498 107395012 0 0 TRUE FALSE 0 NA NA NA 2014-12-29T16:02:55.753 2016-01-19T01:15:33.300 2016-01-19T01:18:25.390 102 GSM1574309 NA PT45P1.rep1 c("cell line background: PT45P1", "cell type: original Pancreatic Ductal Adenocarcinoma (PDAC) cell line")