project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP055411 SRS852593 SRX885687 SRR1813232 232678208 232678208 1 TRUE FALSE 228419064 16830938779 NA NA 2015-02-23T07:05:54.393 2015-09-04T01:13:03.363 2015-09-04T01:14:35.820 150 GSM1616461 SRR1813232.bw Hyperactivated MYC and depleted BUD31, replicate 3 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Hyperactivated MYC and depleted BUD31") SRP055411 SRS852594 SRX885686 SRR1813231 206611288 206611288 1 TRUE FALSE 202909058 14984373414 NA NA 2015-02-23T07:05:51.920 2015-09-04T01:13:02.093 2015-09-04T01:14:35.570 150 GSM1616460 SRR1813231.bw Hyperactivated MYC and depleted BUD31, replicate 2 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Hyperactivated MYC and depleted BUD31") SRP055411 SRS852595 SRX885685 SRR1813230 220705756 220705756 1 TRUE FALSE 216253253 15951551578 NA NA 2015-02-23T07:05:49.850 2015-09-04T01:13:00.747 2015-09-04T01:14:34.853 150 GSM1616459 SRR1813230.bw Hyperactivated MYC and depleted BUD31, replicate 1 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Hyperactivated MYC and depleted BUD31") SRP055411 SRS852596 SRX885684 SRR1813229 240853378 240853378 1 TRUE FALSE 235986476 17409041014 NA NA 2015-02-23T07:05:27.537 2015-09-04T01:12:59.517 2015-09-04T01:14:34.650 150 GSM1616458 SRR1813229.bw Depleted BUD31, replicate 3 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Depleted BUD31") SRP055411 SRS852597 SRX885683 SRR1813228 228934192 228934192 1 TRUE FALSE 224201965 16531259783 NA NA 2015-02-23T07:05:22.860 2015-09-04T01:12:58.153 2015-09-04T01:14:31.293 150 GSM1616457 SRR1813228.bw Depleted BUD31, replicate 2 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Depleted BUD31") SRP055411 SRS852598 SRX885682 SRR1813227 231772482 231772482 1 TRUE FALSE 226511423 16697074341 NA NA 2015-02-23T07:05:31.977 2015-09-04T01:12:57.183 2015-09-04T01:14:30.770 150 GSM1616456 SRR1813227.bw Depleted BUD31, replicate 1 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Depleted BUD31") SRP055411 SRS852599 SRX885681 SRR1813226 256392960 256392960 1 TRUE FALSE 251667764 18585214565 NA NA 2015-02-23T07:05:18.383 2015-09-04T01:11:59.157 2015-09-04T01:14:30.527 150 GSM1616455 SRR1813226.bw Hyperactivated MYC, replicate 3 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Hyperactivated MYC") SRP055411 SRS852600 SRX885680 SRR1813225 255963760 255963760 1 TRUE FALSE 251417261 18566245480 NA NA 2015-02-23T07:05:29.587 2015-09-04T01:11:57.903 2015-09-04T01:14:30.353 150 GSM1616454 SRR1813225.bw Hyperactivated MYC, replicate 2 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Hyperactivated MYC") SRP055411 SRS852601 SRX885679 SRR1813224 253046358 253046358 1 TRUE FALSE 248121694 18316319942 NA NA 2015-02-23T07:05:15.817 2015-09-04T01:11:56.620 2015-09-04T01:14:29.870 150 GSM1616453 SRR1813224.bw Hyperactivated MYC, replicate 1 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Hyperactivated MYC") SRP055411 SRS852602 SRX885678 SRR1813223 268315930 268315930 1 TRUE FALSE 258769856 19056910443 NA NA 2015-02-23T07:05:25.137 2015-09-04T01:11:55.413 2015-09-04T01:14:29.637 150 GSM1616452 SRR1813223.bw Control, replicate 2 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Control") SRP055411 SRS852603 SRX885677 SRR1813222 256060884 256060884 1 TRUE FALSE 250446184 18472990787 NA NA 2015-02-23T07:05:20.633 2015-09-04T01:11:53.743 2015-09-04T01:14:29.393 150 GSM1616451 SRR1813222.bw Control, replicate 1 c("cell line: MYC-ER HMECs with dox-inducible shBUD31 (pINDUCER-shBUD31-3'UTR)", "cell type: Immortalized mammary epithelial cell", "passages: 10", "condition: Control")