project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP056220 SRS875024 SRX957704 SRR1917022 8000000 8000000 1 TRUE FALSE 7969089 792258530 NA NA 2015-03-16T19:55:27.987 2015-08-01T01:17:02.757 2015-08-01T02:10:30.760 200 GSM1635096 SRR1917022.bw OVOL1 shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: GCCAAT") SRP056220 SRS875024 SRX957704 SRR1917023 8000000 8000000 1 TRUE FALSE 7968430 792231639 NA NA 2015-03-16T19:55:27.987 2015-08-01T01:17:02.757 2015-08-01T02:10:30.760 200 GSM1635096 SRR1917023.bw OVOL1 shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: GCCAAT") SRP056220 SRS875024 SRX957704 SRR1917024 8000000 8000000 1 TRUE FALSE 7967999 792202778 NA NA 2015-03-16T19:55:27.987 2015-08-01T01:17:02.757 2015-08-01T02:10:30.760 200 GSM1635096 SRR1917024.bw OVOL1 shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: GCCAAT") SRP056220 SRS875024 SRX957704 SRR1917025 8000000 8000000 1 TRUE FALSE 7967192 791089676 NA NA 2015-03-16T19:55:27.987 2015-08-01T01:17:02.757 2015-08-01T02:10:30.760 200 GSM1635096 SRR1917025.bw OVOL1 shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: GCCAAT") SRP056220 SRS875024 SRX957704 SRR1917026 8000000 8000000 1 TRUE FALSE 7965866 790585586 NA NA 2015-03-16T19:55:27.987 2015-08-01T01:17:02.757 2015-08-01T02:10:30.760 200 GSM1635096 SRR1917026.bw OVOL1 shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: GCCAAT") SRP056220 SRS875024 SRX957704 SRR1917027 8000000 8000000 1 TRUE FALSE 7965178 790559672 NA NA 2015-03-16T19:55:27.987 2015-08-01T01:17:02.757 2015-08-01T02:10:30.760 200 GSM1635096 SRR1917027.bw OVOL1 shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: GCCAAT") SRP056220 SRS875024 SRX957704 SRR1917028 4636496 4636496 1 TRUE FALSE 4615466 458100323 NA NA 2015-03-16T19:55:27.987 2015-08-01T01:17:02.757 2015-08-01T02:10:30.760 200 GSM1635096 SRR1917028.bw OVOL1 shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: GCCAAT") SRP056220 SRS875025 SRX957702 SRR1917007 8000000 8000000 1 TRUE FALSE 7970009 790764499 NA NA 2015-03-16T19:55:29.990 2015-08-01T01:17:00.757 2015-08-01T02:10:30.447 200 GSM1635094 SRR1917007.bw OVOL1 shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: ATGTCA") SRP056220 SRS875025 SRX957702 SRR1917008 8000000 8000000 1 TRUE FALSE 7969143 790729814 NA NA 2015-03-16T19:55:29.990 2015-08-01T01:17:00.757 2015-08-01T02:10:30.447 200 GSM1635094 SRR1917008.bw OVOL1 shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: ATGTCA") SRP056220 SRS875025 SRX957702 SRR1917009 8000000 8000000 1 TRUE FALSE 7969331 790725194 NA NA 2015-03-16T19:55:29.990 2015-08-01T01:17:00.757 2015-08-01T02:10:30.447 200 GSM1635094 SRR1917009.bw OVOL1 shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: ATGTCA") SRP056220 SRS875025 SRX957702 SRR1917010 8000000 8000000 1 TRUE FALSE 7968081 789857086 NA NA 2015-03-16T19:55:29.990 2015-08-01T01:17:00.757 2015-08-01T02:10:30.447 200 GSM1635094 SRR1917010.bw OVOL1 shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: ATGTCA") SRP056220 SRS875025 SRX957702 SRR1917011 8000000 8000000 1 TRUE FALSE 7966833 789191644 NA NA 2015-03-16T19:55:29.990 2015-08-01T01:17:00.757 2015-08-01T02:10:30.447 200 GSM1635094 SRR1917011.bw OVOL1 shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: ATGTCA") SRP056220 SRS875025 SRX957702 SRR1917012 8000000 8000000 1 TRUE FALSE 7966488 789206314 NA NA 2015-03-16T19:55:29.990 2015-08-01T01:17:00.757 2015-08-01T02:10:30.447 200 GSM1635094 SRR1917012.bw OVOL1 shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: ATGTCA") SRP056220 SRS875025 SRX957702 SRR1917013 8000000 8000000 1 TRUE FALSE 7965082 788782524 NA NA 2015-03-16T19:55:29.990 2015-08-01T01:17:00.757 2015-08-01T02:10:30.447 200 GSM1635094 SRR1917013.bw OVOL1 shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: ATGTCA") SRP056220 SRS875025 SRX957702 SRR1917014 327074 327074 1 TRUE FALSE 325668 32271045 NA NA 2015-03-16T19:55:29.990 2015-08-01T01:17:00.757 2015-08-01T02:10:30.447 200 GSM1635094 SRR1917014.bw OVOL1 shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: ATGTCA") SRP056220 SRS875026 SRX957703 SRR1917015 8000000 8000000 1 TRUE FALSE 7974237 792273728 NA NA 2015-03-16T19:55:25.683 2015-08-01T01:17:01.700 2015-08-01T02:10:30.183 200 GSM1635095 SRR1917015.bw OVOL1 shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: TGACCA") SRP056220 SRS875026 SRX957703 SRR1917016 8000000 8000000 1 TRUE FALSE 7973299 792239051 NA NA 2015-03-16T19:55:25.683 2015-08-01T01:17:01.700 2015-08-01T02:10:30.183 200 GSM1635095 SRR1917016.bw OVOL1 shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: TGACCA") SRP056220 SRS875026 SRX957703 SRR1917017 8000000 8000000 1 TRUE FALSE 7973480 792213255 NA NA 2015-03-16T19:55:25.683 2015-08-01T01:17:01.700 2015-08-01T02:10:30.183 200 GSM1635095 SRR1917017.bw OVOL1 shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: TGACCA") SRP056220 SRS875026 SRX957703 SRR1917018 8000000 8000000 1 TRUE FALSE 7973035 791148082 NA NA 2015-03-16T19:55:25.683 2015-08-01T01:17:01.700 2015-08-01T02:10:30.183 200 GSM1635095 SRR1917018.bw OVOL1 shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: TGACCA") SRP056220 SRS875026 SRX957703 SRR1917019 8000000 8000000 1 TRUE FALSE 7971516 790671314 NA NA 2015-03-16T19:55:25.683 2015-08-01T01:17:01.700 2015-08-01T02:10:30.183 200 GSM1635095 SRR1917019.bw OVOL1 shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: TGACCA") SRP056220 SRS875026 SRX957703 SRR1917020 8000000 8000000 1 TRUE FALSE 7970943 790640782 NA NA 2015-03-16T19:55:25.683 2015-08-01T01:17:01.700 2015-08-01T02:10:30.183 200 GSM1635095 SRR1917020.bw OVOL1 shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: TGACCA") SRP056220 SRS875026 SRX957703 SRR1917021 4413294 4413294 1 TRUE FALSE 4397013 436134096 NA NA 2015-03-16T19:55:25.683 2015-08-01T01:17:01.700 2015-08-01T02:10:30.183 200 GSM1635095 SRR1917021.bw OVOL1 shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: OVOL1 shRNA", "barcode: TGACCA") SRP056220 SRS875027 SRX957699 SRR1916986 8000000 8000000 1 TRUE FALSE 7977449 793240552 NA NA 2015-03-16T19:55:15.610 2015-08-01T01:18:22.413 2015-08-01T02:10:29.800 200 GSM1635091 SRR1916986.bw Control shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: AGTTCC") SRP056220 SRS875027 SRX957699 SRR1916987 8000000 8000000 1 TRUE FALSE 7977021 793339153 NA NA 2015-03-16T19:55:15.610 2015-08-01T01:18:22.413 2015-08-01T02:10:29.800 200 GSM1635091 SRR1916987.bw Control shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: AGTTCC") SRP056220 SRS875027 SRX957699 SRR1916988 8000000 8000000 1 TRUE FALSE 7976783 793182300 NA NA 2015-03-16T19:55:15.610 2015-08-01T01:18:22.413 2015-08-01T02:10:29.800 200 GSM1635091 SRR1916988.bw Control shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: AGTTCC") SRP056220 SRS875027 SRX957699 SRR1916989 8000000 8000000 1 TRUE FALSE 7975457 791842464 NA NA 2015-03-16T19:55:15.610 2015-08-01T01:18:22.413 2015-08-01T02:10:29.800 200 GSM1635091 SRR1916989.bw Control shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: AGTTCC") SRP056220 SRS875027 SRX957699 SRR1916990 8000000 8000000 1 TRUE FALSE 7974479 791638396 NA NA 2015-03-16T19:55:15.610 2015-08-01T01:18:22.413 2015-08-01T02:10:29.800 200 GSM1635091 SRR1916990.bw Control shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: AGTTCC") SRP056220 SRS875027 SRX957699 SRR1916991 8000000 8000000 1 TRUE FALSE 7973780 791558054 NA NA 2015-03-16T19:55:15.610 2015-08-01T01:18:22.413 2015-08-01T02:10:29.800 200 GSM1635091 SRR1916991.bw Control shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: AGTTCC") SRP056220 SRS875027 SRX957699 SRR1916992 2331638 2331638 1 TRUE FALSE 2323382 230634898 NA NA 2015-03-16T19:55:15.610 2015-08-01T01:18:22.413 2015-08-01T02:10:29.800 200 GSM1635091 SRR1916992.bw Control shRNA trophoblast cells rep 1 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: AGTTCC") SRP056220 SRS875028 SRX957700 SRR1916993 8000000 8000000 1 TRUE FALSE 7958606 789906424 NA NA 2015-03-16T19:55:20.920 2015-08-01T01:18:23.430 2015-08-01T02:10:29.390 200 GSM1635092 SRR1916993.bw Control shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: CGATGT") SRP056220 SRS875028 SRX957700 SRR1916994 8000000 8000000 1 TRUE FALSE 7958171 789854875 NA NA 2015-03-16T19:55:20.920 2015-08-01T01:18:23.430 2015-08-01T02:10:29.390 200 GSM1635092 SRR1916994.bw Control shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: CGATGT") SRP056220 SRS875028 SRX957700 SRR1916995 8000000 8000000 1 TRUE FALSE 7957857 789824884 NA NA 2015-03-16T19:55:20.920 2015-08-01T01:18:23.430 2015-08-01T02:10:29.390 200 GSM1635092 SRR1916995.bw Control shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: CGATGT") SRP056220 SRS875028 SRX957700 SRR1916996 8000000 8000000 1 TRUE FALSE 7956286 788783126 NA NA 2015-03-16T19:55:20.920 2015-08-01T01:18:23.430 2015-08-01T02:10:29.390 200 GSM1635092 SRR1916996.bw Control shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: CGATGT") SRP056220 SRS875028 SRX957700 SRR1916997 8000000 8000000 1 TRUE FALSE 7955375 788251885 NA NA 2015-03-16T19:55:20.920 2015-08-01T01:18:23.430 2015-08-01T02:10:29.390 200 GSM1635092 SRR1916997.bw Control shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: CGATGT") SRP056220 SRS875028 SRX957700 SRR1916998 8000000 8000000 1 TRUE FALSE 7954739 788251551 NA NA 2015-03-16T19:55:20.920 2015-08-01T01:18:23.430 2015-08-01T02:10:29.390 200 GSM1635092 SRR1916998.bw Control shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: CGATGT") SRP056220 SRS875028 SRX957700 SRR1916999 5226614 5226614 1 TRUE FALSE 5197257 515030055 NA NA 2015-03-16T19:55:20.920 2015-08-01T01:18:23.430 2015-08-01T02:10:29.390 200 GSM1635092 SRR1916999.bw Control shRNA trophoblast cells rep 2 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: CGATGT") SRP056220 SRS875029 SRX957701 SRR1917000 8000000 8000000 1 TRUE FALSE 7967431 791567469 NA NA 2015-03-16T19:55:23.370 2015-08-01T01:16:59.197 2015-08-01T02:10:28.983 200 GSM1635093 SRR1917000.bw Control shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: ACAGTG") SRP056220 SRS875029 SRX957701 SRR1917001 8000000 8000000 1 TRUE FALSE 7967138 791650122 NA NA 2015-03-16T19:55:23.370 2015-08-01T01:16:59.197 2015-08-01T02:10:28.983 200 GSM1635093 SRR1917001.bw Control shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: ACAGTG") SRP056220 SRS875029 SRX957701 SRR1917002 8000000 8000000 1 TRUE FALSE 7965895 791443271 NA NA 2015-03-16T19:55:23.370 2015-08-01T01:16:59.197 2015-08-01T02:10:28.983 200 GSM1635093 SRR1917002.bw Control shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: ACAGTG") SRP056220 SRS875029 SRX957701 SRR1917003 8000000 8000000 1 TRUE FALSE 7965852 790316457 NA NA 2015-03-16T19:55:23.370 2015-08-01T01:16:59.197 2015-08-01T02:10:28.983 200 GSM1635093 SRR1917003.bw Control shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: ACAGTG") SRP056220 SRS875029 SRX957701 SRR1917004 8000000 8000000 1 TRUE FALSE 7964057 789910284 NA NA 2015-03-16T19:55:23.370 2015-08-01T01:16:59.197 2015-08-01T02:10:28.983 200 GSM1635093 SRR1917004.bw Control shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: ACAGTG") SRP056220 SRS875029 SRX957701 SRR1917005 8000000 8000000 1 TRUE FALSE 7963332 789835408 NA NA 2015-03-16T19:55:23.370 2015-08-01T01:16:59.197 2015-08-01T02:10:28.983 200 GSM1635093 SRR1917005.bw Control shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: ACAGTG") SRP056220 SRS875029 SRX957701 SRR1917006 2972140 2972140 1 TRUE FALSE 2958120 293458376 NA NA 2015-03-16T19:55:23.370 2015-08-01T01:16:59.197 2015-08-01T02:10:28.983 200 GSM1635093 SRR1917006.bw Control shRNA trophoblast cells rep 3 c("cell type: Choriocarcinoma trophoblast", "status: exposed to 8-bromo-cAMP", "treatment: control", "barcode: ACAGTG")