project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP057064 SRS901448 SRX986574 SRR1964651 33676286 33676286 1 FALSE FALSE 32176823 2816160321 NA NA 2015-04-10T10:51:25.000 2015-12-12T01:11:54.597 2015-12-12T01:16:22.663 96 GSM1655352 SRR1964651.bw 0 h WT input replicate 1 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901449 SRX986582 SRR1964659 28225104 28225104 1 FALSE FALSE 27418818 2433777174 NA NA 2015-04-10T10:51:36.000 2015-12-12T01:12:03.160 2015-12-12T01:16:22.363 96 GSM1655360 SRR1964659.bw 0 h WT input replicate 2 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901450 SRX986596 SRR1964673 31529350 31529350 1 FALSE FALSE 31426462 2733294051 NA NA 2015-04-10T10:52:24.000 2015-12-12T01:12:38.103 2015-12-12T01:16:22.057 96 GSM1655374 SRR1964673.bw 24 h WT GFP- replicate 3 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901451 SRX986595 SRR1964672 33698105 33698105 1 FALSE FALSE 32808049 2637447297 NA NA 2015-04-10T10:52:22.000 2015-12-12T01:12:36.860 2015-12-12T01:16:21.757 96 GSM1655373 SRR1964672.bw 24 h WT GFP+ replicate 3 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901452 SRX986592 SRR1964669 36075271 36075271 1 FALSE FALSE 35522358 3085404595 NA NA 2015-04-10T10:51:50.000 2015-12-12T01:12:12.800 2015-12-12T01:16:21.477 96 GSM1655370 SRR1964669.bw 4 h WT GFP+ replicate 3 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901453 SRX986593 SRR1964670 39394947 39394947 1 FALSE FALSE 39093949 3511271289 NA NA 2015-04-10T10:50:20.000 2015-12-12T01:12:34.567 2015-12-12T01:16:21.217 96 GSM1655371 SRR1964670.bw 4 h WT GFP- replicate 3 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901454 SRX986594 SRR1964671 31270109 31270109 1 FALSE FALSE 31199279 2788348872 NA NA 2015-04-10T10:52:21.000 2015-12-12T01:12:35.940 2015-12-12T01:16:20.940 96 GSM1655372 SRR1964671.bw 24 h mock GFP- replicate 3 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901455 SRX986591 SRR1964668 41041968 41041968 1 FALSE FALSE 40726052 3583467302 NA NA 2015-04-10T10:51:49.000 2015-12-12T01:12:12.007 2015-12-12T01:16:20.700 96 GSM1655369 SRR1964668.bw 4 h mock GFP- replicate 3 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901456 SRX986590 SRR1964667 32927193 32927193 1 FALSE FALSE 32325134 2883646428 NA NA 2015-04-10T10:51:48.000 2015-12-12T01:12:11.063 2015-12-12T01:16:20.513 96 GSM1655368 SRR1964667.bw 0 h WT input replicate 3 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901457 SRX986589 SRR1964666 25663560 25663560 1 FALSE FALSE 24755062 2203217144 NA NA 2015-04-10T10:51:46.000 2015-12-12T01:12:09.990 2015-12-12T01:16:20.220 96 GSM1655367 SRR1964666.bw 0 h WT LB replicate 3 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901458 SRX986587 SRR1964664 33140709 33140709 1 FALSE FALSE 32710790 2723909927 NA NA 2015-04-10T10:51:44.000 2015-12-12T01:12:08.293 2015-12-12T01:16:19.977 96 GSM1655365 SRR1964664.bw 24 h WT GFP+ replicate 2 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901459 SRX986588 SRR1964665 36263277 36263277 1 FALSE FALSE 36142187 3172305158 NA NA 2015-04-10T10:51:45.000 2015-12-12T01:12:09.133 2015-12-12T01:16:19.760 96 GSM1655366 SRR1964665.bw 24 h WT GFP- replicate 2 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901460 SRX986586 SRR1964663 33849854 33849854 1 FALSE FALSE 33752410 2973108148 NA NA 2015-04-10T10:51:43.000 2015-12-12T01:12:07.317 2015-12-12T01:16:19.493 96 GSM1655364 SRR1964663.bw 24 h mock GFP- replicate 2 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901461 SRX986584 SRR1964661 39754314 39754314 1 FALSE FALSE 39280846 3443701944 NA NA 2015-04-10T10:51:40.000 2015-12-12T01:12:04.923 2015-12-12T01:16:19.243 96 GSM1655362 SRR1964661.bw 4 h WT GFP+ replicate 2 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901462 SRX986585 SRR1964662 40000000 40000000 1 FALSE FALSE 39894018 3536356058 NA NA 2015-04-10T10:51:42.000 2015-12-12T01:12:06.320 2015-12-12T01:16:19.030 96 GSM1655363 SRR1964662.bw 4 h WT GFP- replicate 2 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901463 SRX986583 SRR1964660 45613486 45613486 1 FALSE FALSE 45495095 3982860368 NA NA 2015-04-10T10:51:39.000 2015-12-12T01:12:04.010 2015-12-12T01:16:18.780 96 GSM1655361 SRR1964660.bw 4 h mock GFP- replicate 2 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901464 SRX986581 SRR1964658 35894764 35894764 1 FALSE FALSE 33446046 2955201538 NA NA 2015-04-10T10:51:35.000 2015-12-12T01:12:02.303 2015-12-12T01:16:18.583 96 GSM1655359 SRR1964658.bw 0 h WT LB replicate 2 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901465 SRX986580 SRR1964657 32904392 32904392 1 FALSE FALSE 32799542 2925088490 NA NA 2015-04-10T10:51:34.000 2015-12-12T01:12:01.300 2015-12-12T01:16:18.360 96 GSM1655358 SRR1964657.bw 24 h WT GFP- replicate 1 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901466 SRX986579 SRR1964656 36372480 36372480 1 FALSE FALSE 35737059 2837466478 NA NA 2015-04-10T10:51:32.000 2015-12-12T01:12:00.447 2015-12-12T01:16:18.140 96 GSM1655357 SRR1964656.bw 24 h WT GFP+ replicate 1 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901467 SRX986578 SRR1964655 41319979 41319979 1 FALSE FALSE 41182631 3664042390 NA NA 2015-04-10T10:51:31.000 2015-12-12T01:11:59.617 2015-12-12T01:16:17.890 96 GSM1655356 SRR1964655.bw 24 h mock GFP- replicate 1 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901468 SRX986577 SRR1964654 37195224 37195224 1 FALSE FALSE 37094240 3310222714 NA NA 2015-04-10T10:51:30.000 2015-12-12T01:11:57.720 2015-12-12T01:16:17.693 96 GSM1655355 SRR1964654.bw 4 h WT GFP- replicate 1 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901469 SRX986576 SRR1964653 45616401 45616401 1 FALSE FALSE 45119508 3988923007 NA NA 2015-04-10T10:51:28.000 2015-12-12T01:11:56.583 2015-12-12T01:16:17.493 96 GSM1655354 SRR1964653.bw 4 h WT GFP+ replicate 1 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901470 SRX986575 SRR1964652 46393031 46393031 1 FALSE FALSE 46254420 4147177473 NA NA 2015-04-10T10:51:27.000 2015-12-12T01:11:55.573 2015-12-12T01:16:17.280 96 GSM1655353 SRR1964652.bw 4 h mock GFP- replicate 1 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)") SRP057064 SRS901471 SRX986573 SRR1964650 32866272 32866272 1 FALSE FALSE 28143217 2443838169 NA NA 2015-04-10T10:51:24.000 2015-12-12T01:11:53.020 2015-12-12T01:16:17.053 96 GSM1655351 SRR1964650.bw 0 h WT LB replicate 1 c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella typhimurium SL1344", "organism: mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344)")