project	sample	experiment	run	read_count_as_reported_by_sra	reads_downloaded	proportion_of_reads_reported_by_sra_downloaded	paired_end	sra_misreported_paired_end	mapped_read_count	auc	sharq_beta_tissue	sharq_beta_cell_type	biosample_submission_date	biosample_publication_date	biosample_update_date	avg_read_length	geo_accession	bigwig_file	title	characteristics
SRP057250	SRS1198076	SRX1470953	SRR2981503	6251030	6251030	1	FALSE	FALSE	5715272	407584673	NA	NA	2015-12-09T10:18:51.000	2015-12-12T01:18:46.310	2015-12-12T01:24:36.760	75	GSM1967964	SRR2981503.bw	16 h mock replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198077	SRX1470952	SRR2981502	12490393	12490393	1	FALSE	FALSE	10657933	890801877	NA	NA	2015-12-09T10:18:48.000	2015-12-12T01:18:45.247	2015-12-12T01:24:36.503	99	GSM1967963	SRR2981502.bw	16 h mock replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198078	SRX1470951	SRR2981501	11898427	11898427	1	FALSE	FALSE	10153628	913382180	NA	NA	2015-12-09T10:18:47.000	2015-12-12T01:18:44.327	2015-12-12T01:24:36.233	99	GSM1967962	SRR2981501.bw	16 h mock replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198079	SRX1470950	SRR2981500	5504958	5504958	1	FALSE	FALSE	4738326	328849259	NA	NA	2015-12-09T10:18:46.000	2015-12-12T01:18:43.263	2015-12-12T01:24:36.027	75	GSM1967961	SRR2981500.bw	4 h mock replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198080	SRX1470949	SRR2981499	17489203	17489203	1	FALSE	FALSE	14835694	1343659925	NA	NA	2015-12-09T10:18:45.000	2015-12-12T01:18:42.303	2015-12-12T01:24:35.723	99	GSM1967960	SRR2981499.bw	4 h mock replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198081	SRX1470948	SRR2981498	18716170	18716170	1	FALSE	FALSE	16153707	1482779395	NA	NA	2015-12-09T10:18:44.000	2015-12-12T01:18:41.317	2015-12-12T01:24:35.453	99	GSM1967959	SRR2981498.bw	4 h mock replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198082	SRX1470947	SRR2981497	5709119	5709119	1	FALSE	FALSE	4025785	267939806	NA	NA	2015-12-09T10:18:51.000	2015-12-12T01:18:40.310	2015-12-12T01:24:35.183	75	GSM1967958	SRR2981497.bw	16 h WT replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198083	SRX1470946	SRR2981496	9492760	9492760	1	FALSE	FALSE	6374591	507298960	NA	NA	2015-12-09T10:18:50.000	2015-12-12T01:18:39.500	2015-12-12T01:24:34.933	99	GSM1967957	SRR2981496.bw	16 h WT replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198084	SRX1470945	SRR2981495	10479816	10479816	1	FALSE	FALSE	7308445	566689786	NA	NA	2015-12-09T10:18:49.000	2015-12-12T01:18:38.717	2015-12-12T01:24:34.697	99	GSM1967956	SRR2981495.bw	16 h WT replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198085	SRX1470944	SRR2981494	6017907	6017907	1	FALSE	FALSE	5169139	359569373	NA	NA	2015-12-09T10:18:43.000	2015-12-12T01:18:37.890	2015-12-12T01:24:34.393	75	GSM1967955	SRR2981494.bw	4 h WT replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198086	SRX1470943	SRR2981493	17388755	17388755	1	FALSE	FALSE	14024484	1196262355	NA	NA	2015-12-09T10:18:43.000	2015-12-12T01:18:37.070	2015-12-12T01:24:34.153	99	GSM1967954	SRR2981493.bw	4 h WT replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198087	SRX1470942	SRR2981492	15184061	15184061	1	FALSE	FALSE	11690660	992310597	NA	NA	2015-12-09T10:18:42.000	2015-12-12T01:18:36.303	2015-12-12T01:24:33.883	99	GSM1967953	SRR2981492.bw	4 h WT replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198088	SRX1470941	SRR2981491	5942979	5942979	1	FALSE	FALSE	5203918	367448294	NA	NA	2015-12-09T10:18:41.000	2015-12-12T01:18:35.213	2015-12-12T01:24:33.600	75	GSM1967952	SRR2981491.bw	0 h WT replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198089	SRX1470940	SRR2981490	7665500	7665500	1	FALSE	FALSE	4932827	371251166	NA	NA	2015-12-09T10:18:40.000	2015-12-12T01:18:34.063	2015-12-12T01:24:33.313	99	GSM1967951	SRR2981490.bw	0 h WT replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198090	SRX1470939	SRR2981489	8706490	8706490	1	FALSE	FALSE	5630756	422143426	NA	NA	2015-12-09T10:18:39.000	2015-12-12T01:18:33.337	2015-12-12T01:24:33.120	99	GSM1967950	SRR2981489.bw	0 h WT replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198091	SRX1470938	SRR2981488	5410592	5410592	1	FALSE	FALSE	4724070	329388569	NA	NA	2015-12-09T10:18:38.000	2015-12-12T01:18:32.187	2015-12-12T01:24:32.797	75	GSM1967949	SRR2981488.bw	16 h ΔyrlA/B replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198092	SRX1470937	SRR2981487	9817055	9817055	1	FALSE	FALSE	6826520	536284223	NA	NA	2015-12-09T10:18:37.000	2015-12-12T01:18:31.413	2015-12-12T01:24:32.560	99	GSM1967948	SRR2981487.bw	16 h ΔyrlA/B replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198093	SRX1470936	SRR2981486	9308088	9308088	1	FALSE	FALSE	5930830	443605621	NA	NA	2015-12-09T10:18:36.000	2015-12-12T01:18:30.590	2015-12-12T01:24:32.330	99	GSM1967947	SRR2981486.bw	16 h ΔyrlA/B replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198094	SRX1470935	SRR2981485	5680224	5680224	1	FALSE	FALSE	4939988	345603542	NA	NA	2015-12-09T10:18:35.000	2015-12-12T01:18:29.747	2015-12-12T01:24:32.017	75	GSM1967946	SRR2981485.bw	4 h ΔyrlA/B replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198095	SRX1470934	SRR2981484	17080128	17080128	1	FALSE	FALSE	13142260	1124455768	NA	NA	2015-12-09T10:18:35.000	2015-12-12T01:18:27.863	2015-12-12T01:24:31.767	99	GSM1967945	SRR2981484.bw	4 h ΔyrlA/B replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198096	SRX1470933	SRR2981483	17215523	17215523	1	FALSE	FALSE	14144543	1234194999	NA	NA	2015-12-09T10:18:34.000	2015-12-12T01:19:58.680	2015-12-12T01:24:31.397	99	GSM1967944	SRR2981483.bw	4 h ΔyrlA/B replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198097	SRX1470932	SRR2981482	6115209	6115209	1	FALSE	FALSE	5271918	369770417	NA	NA	2015-12-09T10:19:26.000	2015-12-12T01:18:49.663	2015-12-12T01:24:31.120	75	GSM1967943	SRR2981482.bw	0 h ΔyrlA/B replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198098	SRX1470931	SRR2981481	9312967	9312967	1	FALSE	FALSE	7169117	566776865	NA	NA	2015-12-09T10:19:26.000	2015-12-12T01:18:48.907	2015-12-12T01:24:30.880	99	GSM1967942	SRR2981481.bw	0 h ΔyrlA/B replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198099	SRX1470930	SRR2981480	8159594	8159594	1	FALSE	FALSE	5569239	410872186	NA	NA	2015-12-09T10:19:25.000	2015-12-12T01:18:48.053	2015-12-12T01:24:30.647	99	GSM1967941	SRR2981480.bw	0 h ΔyrlA/B replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198100	SRX1470929	SRR2981479	5625783	5625783	1	FALSE	FALSE	4209632	283366960	NA	NA	2015-12-09T10:19:24.000	2015-12-12T01:18:47.120	2015-12-12T01:24:30.437	75	GSM1967940	SRR2981479.bw	16 h ΔryhB/ΔisrE replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198101	SRX1470928	SRR2981478	9460867	9460867	1	FALSE	FALSE	6689264	541498680	NA	NA	2015-12-09T10:19:23.000	2015-12-12T01:19:57.890	2015-12-12T01:24:30.240	99	GSM1967939	SRR2981478.bw	16 h ΔryhB/ΔisrE replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198102	SRX1470927	SRR2981477	10389743	10389743	1	FALSE	FALSE	7619047	597472164	NA	NA	2015-12-09T10:19:22.000	2015-12-12T01:19:56.843	2015-12-12T01:24:30.010	99	GSM1967938	SRR2981477.bw	16 h ΔryhB/ΔisrE replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198103	SRX1470926	SRR2981476	5364848	5364848	1	FALSE	FALSE	4394899	298364195	NA	NA	2015-12-09T10:19:21.000	2015-12-12T01:19:56.047	2015-12-12T01:24:29.747	75	GSM1967937	SRR2981476.bw	4 h ΔryhB/ΔisrE replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198104	SRX1470925	SRR2981475	16390120	16390120	1	FALSE	FALSE	13300085	1135989678	NA	NA	2015-12-09T10:19:20.000	2015-12-12T01:19:54.923	2015-12-12T01:24:29.527	99	GSM1967936	SRR2981475.bw	4 h ΔryhB/ΔisrE replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198105	SRX1470924	SRR2981474	13650860	13650860	1	FALSE	FALSE	11600235	989608194	NA	NA	2015-12-09T10:19:19.000	2015-12-12T01:19:53.880	2015-12-12T01:24:29.233	99	GSM1967935	SRR2981474.bw	4 h ΔryhB/ΔisrE replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198106	SRX1470923	SRR2981473	7247296	7247296	1	FALSE	FALSE	6016074	419800677	NA	NA	2015-12-09T10:19:19.000	2015-12-12T01:19:53.050	2015-12-12T01:24:29.000	75	GSM1967934	SRR2981473.bw	0 h ΔryhB/ΔisrE replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198107	SRX1470922	SRR2981472	10800499	10800499	1	FALSE	FALSE	8009538	680427686	NA	NA	2015-12-09T10:19:15.000	2015-12-12T01:19:52.003	2015-12-12T01:24:28.747	99	GSM1967933	SRR2981472.bw	0 h ΔryhB/ΔisrE replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198108	SRX1470921	SRR2981471	8239177	8239177	1	FALSE	FALSE	5983065	486855529	NA	NA	2015-12-09T10:19:13.000	2015-12-12T01:19:50.977	2015-12-12T01:24:28.450	99	GSM1967932	SRR2981471.bw	0 h ΔryhB/ΔisrE replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198109	SRX1470920	SRR2981470	6021641	6021641	1	FALSE	FALSE	5100210	352809079	NA	NA	2015-12-09T10:19:13.000	2015-12-12T01:19:50.067	2015-12-12T01:24:28.230	75	GSM1967931	SRR2981470.bw	16 h ΔomrA/B replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198110	SRX1470919	SRR2981469	12028157	12028157	1	FALSE	FALSE	8049280	618148848	NA	NA	2015-12-09T10:19:12.000	2015-12-12T01:19:49.007	2015-12-12T01:24:27.930	99	GSM1967930	SRR2981469.bw	16 h ΔomrA/B replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198111	SRX1470917	SRR2981467	5934104	5934104	1	FALSE	FALSE	5212728	362851678	NA	NA	2015-12-09T10:19:18.000	2015-12-12T01:19:47.067	2015-12-12T01:24:27.660	75	GSM1967928	SRR2981467.bw	4 h ΔomrA/B replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198112	SRX1470918	SRR2981468	6080164	6080164	1	FALSE	FALSE	4317996	332293805	NA	NA	2015-12-09T10:19:11.000	2015-12-12T01:19:48.110	2015-12-12T01:24:27.363	99	GSM1967929	SRR2981468.bw	16 h ΔomrA/B replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198113	SRX1470915	SRR2981465	14530887	14530887	1	FALSE	FALSE	11089424	918624334	NA	NA	2015-12-09T10:19:16.000	2015-12-12T01:19:45.013	2015-12-12T01:24:27.023	99	GSM1967926	SRR2981465.bw	4 h ΔomrA/B replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198114	SRX1470916	SRR2981466	19369931	19369931	1	FALSE	FALSE	15575740	1328694329	NA	NA	2015-12-09T10:19:17.000	2015-12-12T01:19:45.840	2015-12-12T01:24:26.760	99	GSM1967927	SRR2981466.bw	4 h ΔomrA/B replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198115	SRX1470913	SRR2981463	11234251	11234251	1	FALSE	FALSE	8493761	603297348	NA	NA	2015-12-09T10:19:09.000	2015-12-12T01:19:43.117	2015-12-12T01:24:26.563	99	GSM1967924	SRR2981463.bw	0 h ΔomrA/B replicate 2	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198116	SRX1470914	SRR2981464	6611752	6611752	1	FALSE	FALSE	5394268	373024494	NA	NA	2015-12-09T10:19:10.000	2015-12-12T01:19:44.190	2015-12-12T01:24:26.277	75	GSM1967925	SRR2981464.bw	0 h ΔomrA/B replicate 3	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")
SRP057250	SRS1198117	SRX1470912	SRR2981462	7958579	7958579	1	FALSE	FALSE	4982283	322191712	NA	NA	2015-12-09T10:19:08.000	2015-12-12T01:19:42.233	2015-12-12T01:24:26.017	99	GSM1967923	SRR2981462.bw	0 h ΔomrA/B replicate 1	c("human cell line: HeLa-S3 (ATCC CCL-2.2)", "strain: Salmonella Typhimurium SL1344", "organism: mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344")