project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP059959 SRS975880 SRX1077078 SRR2082532 72594420 72594420 1 TRUE FALSE 71927428 3550848290 NA NA 2015-06-29T18:42:38.000 2016-01-06T01:12:36.683 2016-01-06T01:16:23.450 100 GSM1726475 SRR2082532.bw D3-3_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975880 SRX1077078 SRR2082533 72532426 72532426 1 TRUE FALSE 71860147 3555601546 NA NA 2015-06-29T18:42:38.000 2016-01-06T01:12:36.683 2016-01-06T01:16:23.450 100 GSM1726475 SRR2082533.bw D3-3_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975881 SRX1077079 SRR2082534 52194036 52194036 1 TRUE FALSE 51528434 2529376979 NA NA 2015-06-29T18:42:39.000 2016-01-06T01:12:37.533 2016-01-06T01:16:23.230 100 GSM1726476 SRR2082534.bw D7-3_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975881 SRX1077079 SRR2082535 52216892 52216892 1 TRUE FALSE 51633789 2546362907 NA NA 2015-06-29T18:42:39.000 2016-01-06T01:12:37.533 2016-01-06T01:16:23.230 100 GSM1726476 SRR2082535.bw D7-3_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975881 SRX1077079 SRR2082536 64506182 64506182 1 TRUE FALSE 63715375 3145217129 NA NA 2015-06-29T18:42:39.000 2016-01-06T01:12:37.533 2016-01-06T01:16:23.230 100 GSM1726476 SRR2082536.bw D7-3_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975882 SRX1077077 SRR2082530 65308064 65308064 1 TRUE FALSE 64690809 3193285583 NA NA 2015-06-29T18:42:37.000 2016-01-06T01:12:35.643 2016-01-06T01:16:23.023 100 GSM1726474 SRR2082530.bw D2-2_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975882 SRX1077077 SRR2082531 64937252 64937252 1 TRUE FALSE 64317935 3182188756 NA NA 2015-06-29T18:42:37.000 2016-01-06T01:12:35.643 2016-01-06T01:16:23.023 100 GSM1726474 SRR2082531.bw D2-2_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975883 SRX1077076 SRR2082528 64674004 64674004 1 TRUE FALSE 63509890 3124246533 NA NA 2015-06-29T18:42:35.000 2016-01-06T01:12:34.793 2016-01-06T01:16:22.850 100 GSM1726473 SRR2082528.bw D9_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975883 SRX1077076 SRR2082529 64663258 64663258 1 TRUE FALSE 63996051 3160008916 NA NA 2015-06-29T18:42:35.000 2016-01-06T01:12:34.793 2016-01-06T01:16:22.850 100 GSM1726473 SRR2082529.bw D9_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975884 SRX1077075 SRR2082526 65375002 65375002 1 TRUE FALSE 64305859 3165108447 NA NA 2015-06-29T18:42:33.000 2016-01-06T01:12:33.970 2016-01-06T01:16:22.657 100 GSM1726472 SRR2082526.bw D1-2_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975884 SRX1077075 SRR2082527 65801214 65801214 1 TRUE FALSE 65222036 3222269162 NA NA 2015-06-29T18:42:33.000 2016-01-06T01:12:33.970 2016-01-06T01:16:22.657 100 GSM1726472 SRR2082527.bw D1-2_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975885 SRX1077072 SRR2082521 58430458 58430458 1 TRUE FALSE 58112361 5763448004 NA NA 2015-06-29T18:42:30.000 2016-01-06T01:12:31.447 2016-01-06T01:16:22.457 200 GSM1726469 SRR2082521.bw D2-1_pa_100ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975886 SRX1077071 SRR2082520 59962158 59962158 1 TRUE FALSE 59652316 5916426890 NA NA 2015-06-29T18:42:29.000 2016-01-06T01:12:30.287 2016-01-06T01:16:22.263 200 GSM1726468 SRR2082520.bw D6-2_pa_100ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975887 SRX1077069 SRR2082518 76866218 76866218 1 TRUE FALSE 76503335 7589999455 NA NA 2015-06-29T18:42:26.000 2016-01-06T01:12:27.673 2016-01-06T01:16:22.060 200 GSM1726466 SRR2082518.bw D1-2_pa_100ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975888 SRX1077074 SRR2082523 58064778 58064778 1 TRUE FALSE 57393903 2817941084 NA NA 2015-06-29T18:42:32.000 2016-01-06T01:12:33.203 2016-01-06T01:16:21.860 100 GSM1726471 SRR2082523.bw D10_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975888 SRX1077074 SRR2082524 58528876 58528876 1 TRUE FALSE 57947063 2858241480 NA NA 2015-06-29T18:42:32.000 2016-01-06T01:12:33.203 2016-01-06T01:16:21.860 100 GSM1726471 SRR2082524.bw D10_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975888 SRX1077074 SRR2082525 65271634 65271634 1 TRUE FALSE 64569071 3188942459 NA NA 2015-06-29T18:42:32.000 2016-01-06T01:12:33.203 2016-01-06T01:16:21.860 100 GSM1726471 SRR2082525.bw D10_pa_50ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975889 SRX1077073 SRR2082522 54279626 54279626 1 TRUE FALSE 54003969 5355626326 NA NA 2015-06-29T18:42:31.000 2016-01-06T01:12:32.383 2016-01-06T01:16:21.600 200 GSM1726470 SRR2082522.bw D8_pa_100ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975890 SRX1077070 SRR2082519 48542470 48542470 1 TRUE FALSE 48298686 4790363559 NA NA 2015-06-29T18:42:27.000 2016-01-06T01:12:29.487 2016-01-06T01:16:21.433 200 GSM1726467 SRR2082519.bw D4-3_pa_100ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975891 SRX1077064 SRR2082513 90570094 90570094 1 TRUE FALSE 89786894 8910558923 NA NA 2015-06-29T18:42:19.000 2016-01-06T01:13:49.203 2016-01-06T01:16:21.250 200 GSM1726461 SRR2082513.bw D2-2_pa_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975892 SRX1077063 SRR2082512 85306476 85306476 1 TRUE FALSE 84638157 8396826119 NA NA 2015-06-29T18:42:18.000 2016-01-06T01:13:48.370 2016-01-06T01:16:21.030 200 GSM1726460 SRR2082512.bw D1-2_pa_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975893 SRX1077067 SRR2082516 43084732 43084732 1 TRUE FALSE 42860265 4248638667 NA NA 2015-06-29T18:42:23.000 2016-01-06T01:13:52.197 2016-01-06T01:16:20.817 200 GSM1726464 SRR2082516.bw D3-2_pa_100ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975894 SRX1077066 SRR2082515 85257924 85257924 1 TRUE FALSE 84536902 8386321645 NA NA 2015-06-29T18:42:22.000 2016-01-06T01:13:51.177 2016-01-06T01:16:20.650 200 GSM1726463 SRR2082515.bw D6-1_pa_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975895 SRX1077068 SRR2082517 55341338 55341338 1 TRUE FALSE 55048083 5458978071 NA NA 2015-06-29T18:42:24.000 2016-01-06T01:13:53.393 2016-01-06T01:16:20.480 200 GSM1726465 SRR2082517.bw D5-2_pa_100ns c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975896 SRX1077065 SRR2082514 82904856 82904856 1 TRUE FALSE 82225413 8158768629 NA NA 2015-06-29T18:42:21.000 2016-01-06T01:13:50.193 2016-01-06T01:16:20.253 200 GSM1726462 SRR2082514.bw D3-1_pa_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975897 SRX1077059 SRR2082508 110572258 110572258 1 TRUE FALSE 110200609 10937566896 NA NA 2015-06-29T18:42:13.000 2016-01-06T01:13:44.763 2016-01-06T01:16:20.080 200 GSM1726456 SRR2082508.bw D6-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975898 SRX1077060 SRR2082509 120278556 120278556 1 TRUE FALSE 119727752 11910226342 NA NA 2015-06-29T18:42:14.000 2016-01-06T01:13:45.713 2016-01-06T01:16:19.877 200 GSM1726457 SRR2082509.bw D7-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975899 SRX1077058 SRR2082507 117202542 117202542 1 TRUE FALSE 116811277 11602891580 NA NA 2015-06-29T18:42:12.000 2016-01-06T01:13:43.757 2016-01-06T01:16:19.700 200 GSM1726455 SRR2082507.bw D6-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975900 SRX1077061 SRR2082510 152165158 152165158 1 TRUE FALSE 151182249 15040511500 NA NA 2015-06-29T18:42:15.000 2016-01-06T01:13:46.507 2016-01-06T01:16:19.523 200 GSM1726458 SRR2082510.bw D7-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975901 SRX1077062 SRR2082511 113549430 113549430 1 TRUE FALSE 113035448 11240921828 NA NA 2015-06-29T18:42:16.000 2016-01-06T01:13:47.577 2016-01-06T01:16:19.330 200 GSM1726459 SRR2082511.bw D7-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975902 SRX1077053 SRR2082501 68310042 68310042 1 TRUE FALSE 67834618 6739992045 NA NA 2015-06-29T18:40:28.000 2016-01-06T01:13:39.287 2016-01-06T01:16:18.940 200 GSM1726450 SRR2082501.bw D4-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975902 SRX1077053 SRR2082502 68062004 68062004 1 TRUE FALSE 67625495 6719903304 NA NA 2015-06-29T18:40:28.000 2016-01-06T01:13:39.287 2016-01-06T01:16:18.940 200 GSM1726450 SRR2082502.bw D4-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975903 SRX1077052 SRR2082499 70012908 70012908 1 TRUE FALSE 69565022 6916224311 NA NA 2015-06-29T18:40:25.000 2016-01-06T01:13:38.300 2016-01-06T01:16:18.723 200 GSM1726449 SRR2082499.bw D4-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975903 SRX1077052 SRR2082500 69799744 69799744 1 TRUE FALSE 69390959 6899251607 NA NA 2015-06-29T18:40:25.000 2016-01-06T01:13:38.300 2016-01-06T01:16:18.723 200 GSM1726449 SRR2082500.bw D4-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975904 SRX1077054 SRR2082503 44721462 44721462 1 TRUE FALSE 44534611 4431075258 NA NA 2015-06-29T18:40:30.000 2016-01-06T01:13:40.053 2016-01-06T01:16:18.043 200 GSM1726451 SRR2082503.bw D5-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975905 SRX1077056 SRR2082505 101094566 101094566 1 TRUE FALSE 100717356 10017754304 NA NA 2015-06-29T18:42:06.000 2016-01-06T01:13:42.067 2016-01-06T01:16:17.830 200 GSM1726453 SRR2082505.bw D5-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975906 SRX1077057 SRR2082506 108890084 108890084 1 TRUE FALSE 108574909 10791531382 NA NA 2015-06-29T18:42:08.000 2016-01-06T01:13:42.947 2016-01-06T01:16:17.077 200 GSM1726454 SRR2082506.bw D6-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975907 SRX1077055 SRR2082504 92257612 92257612 1 TRUE FALSE 91905706 9138726579 NA NA 2015-06-29T18:42:03.000 2016-01-06T01:13:41.053 2016-01-06T01:16:16.863 200 GSM1726452 SRR2082504.bw D5-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975908 SRX1077050 SRR2082495 79336488 79336488 1 TRUE FALSE 78855209 7837452884 NA NA 2015-06-29T18:40:22.000 2016-01-06T01:13:36.497 2016-01-06T01:16:16.603 200 GSM1726447 SRR2082495.bw D3-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975908 SRX1077050 SRR2082496 79041152 79041152 1 TRUE FALSE 78602515 7812608656 NA NA 2015-06-29T18:40:22.000 2016-01-06T01:13:36.497 2016-01-06T01:16:16.603 200 GSM1726447 SRR2082496.bw D3-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975909 SRX1077049 SRR2082493 61471116 61471116 1 TRUE FALSE 61062308 6069185457 NA NA 2015-06-29T18:40:19.000 2016-01-06T01:13:35.590 2016-01-06T01:16:16.427 200 GSM1726446 SRR2082493.bw D3-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975909 SRX1077049 SRR2082494 61271206 61271206 1 TRUE FALSE 60899373 6053467411 NA NA 2015-06-29T18:40:19.000 2016-01-06T01:13:35.590 2016-01-06T01:16:16.427 200 GSM1726446 SRR2082494.bw D3-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975910 SRX1077048 SRR2082491 72605852 72605852 1 TRUE FALSE 72163647 7173013365 NA NA 2015-06-29T18:40:18.000 2016-01-06T01:13:34.757 2016-01-06T01:16:16.220 200 GSM1726445 SRR2082491.bw D3-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975910 SRX1077048 SRR2082492 72428948 72428948 1 TRUE FALSE 72025004 7159908686 NA NA 2015-06-29T18:40:18.000 2016-01-06T01:13:34.757 2016-01-06T01:16:16.220 200 GSM1726445 SRR2082492.bw D3-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975911 SRX1077047 SRR2082489 67558552 67558552 1 TRUE FALSE 67146429 6676083086 NA NA 2015-06-29T18:40:14.000 2016-01-06T01:13:33.973 2016-01-06T01:16:15.997 200 GSM1726444 SRR2082489.bw D2-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975911 SRX1077047 SRR2082490 67159328 67159328 1 TRUE FALSE 66732157 6635709908 NA NA 2015-06-29T18:40:14.000 2016-01-06T01:13:33.973 2016-01-06T01:16:15.997 200 GSM1726444 SRR2082490.bw D2-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975912 SRX1077051 SRR2082497 69197696 69197696 1 TRUE FALSE 68785634 6834746109 NA NA 2015-06-29T18:40:24.000 2016-01-06T01:13:37.380 2016-01-06T01:16:15.493 200 GSM1726448 SRR2082497.bw D4-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975912 SRX1077051 SRR2082498 68987406 68987406 1 TRUE FALSE 68612208 6817917917 NA NA 2015-06-29T18:40:24.000 2016-01-06T01:13:37.380 2016-01-06T01:16:15.493 200 GSM1726448 SRR2082498.bw D4-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975913 SRX1077046 SRR2082487 68491982 68491982 1 TRUE FALSE 68090631 6772013098 NA NA 2015-06-29T18:40:13.000 2016-01-06T01:13:33.130 2016-01-06T01:16:15.257 200 GSM1726443 SRR2082487.bw D2-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975913 SRX1077046 SRR2082488 68146992 68146992 1 TRUE FALSE 67727074 6736326554 NA NA 2015-06-29T18:40:13.000 2016-01-06T01:13:33.130 2016-01-06T01:16:15.257 200 GSM1726443 SRR2082488.bw D2-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975916 SRX1077045 SRR2082485 65283244 65283244 1 TRUE FALSE 64898689 6456548592 NA NA 2015-06-29T18:40:11.000 2016-01-06T01:16:18.267 2016-01-06T01:20:16.250 200 GSM1726442 SRR2082485.bw D2-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975916 SRX1077045 SRR2082486 64864328 64864328 1 TRUE FALSE 64463595 6413357382 NA NA 2015-06-29T18:40:11.000 2016-01-06T01:16:18.267 2016-01-06T01:20:16.250 200 GSM1726442 SRR2082486.bw D2-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975917 SRX1077042 SRR2082479 70288410 70288410 1 TRUE FALSE 69855149 6943716621 NA NA 2015-06-29T18:40:05.000 2016-01-06T01:16:15.040 2016-01-06T01:20:16.050 200 GSM1726439 SRR2082479.bw D1-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975917 SRX1077042 SRR2082480 69783944 69783944 1 TRUE FALSE 69335999 6892623290 NA NA 2015-06-29T18:40:05.000 2016-01-06T01:16:15.040 2016-01-06T01:20:16.050 200 GSM1726439 SRR2082480.bw D1-1_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975919 SRX1077044 SRR2082483 68696978 68696978 1 TRUE FALSE 68278161 6787539147 NA NA 2015-06-29T18:40:09.000 2016-01-06T01:16:17.447 2016-01-06T01:20:15.880 200 GSM1726441 SRR2082483.bw D1-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975919 SRX1077044 SRR2082484 68249346 68249346 1 TRUE FALSE 67812571 6741533713 NA NA 2015-06-29T18:40:09.000 2016-01-06T01:16:17.447 2016-01-06T01:20:15.880 200 GSM1726441 SRR2082484.bw D1-3_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975920 SRX1077043 SRR2082481 74892498 74892498 1 TRUE FALSE 74401956 7392338305 NA NA 2015-06-29T18:40:07.000 2016-01-06T01:16:16.537 2016-01-06T01:20:15.550 200 GSM1726440 SRR2082481.bw D1-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary") SRP059959 SRS975920 SRX1077043 SRR2082482 74656590 74656590 1 TRUE FALSE 74152897 7368463262 NA NA 2015-06-29T18:40:07.000 2016-01-06T01:16:16.537 2016-01-06T01:20:15.550 200 GSM1726440 SRR2082482.bw D1-2_tot_100ss c("cell type: granulocyte", "tissue: blood", "passages: primary")