project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP063339 SRS1055897 SRX1184009 SRR2242948 47137051 47137051 1 FALSE FALSE 45196445 3399481676 NA NA 2015-09-04T08:21:46.000 2016-01-13T01:10:51.267 2016-01-13T01:14:38.283 76 GSM1867014 SRR2242948.bw HEK_293_E7_2_USC_RNA_43 c("cell line: HEK293", "clone: HEK293 Deletion Clone 1", "time point: RNA extracted on day E") SRP063339 SRS1055898 SRX1184008 SRR2242947 52674743 52674743 1 FALSE FALSE 50825956 3824840563 NA NA 2015-09-04T08:21:44.000 2016-01-13T01:10:50.313 2016-01-13T01:14:38.073 76 GSM1867013 SRR2242947.bw HEK_293_E7_1_USC_RNA_42 c("cell line: HEK293", "clone: HEK293 Deletion Clone 1", "time point: RNA extracted on day E") SRP063339 SRS1055899 SRX1184007 SRR2242946 42364589 42364589 1 FALSE FALSE 40336436 3030619659 NA NA 2015-09-04T08:21:43.000 2016-01-13T01:10:49.230 2016-01-13T01:14:37.880 76 GSM1867012 SRR2242946.bw HEK_293_C2_USC_RNA_41 c("cell line: HEK293", "clone: HEK293 Control Clone 2", "time point: RNA extracted on day E") SRP063339 SRS1055900 SRX1184006 SRR2242945 44301804 44301804 1 FALSE FALSE 42470438 3193069130 NA NA 2015-09-04T08:21:42.000 2016-01-13T01:10:48.337 2016-01-13T01:14:37.690 76 GSM1867011 SRR2242945.bw HEK_293_C1_USC_RNA_40 c("cell line: HEK293", "clone: HEK293 Control Clone 1", "time point: RNA extracted on day E") SRP063339 SRS1055901 SRX1184005 SRR2242944 31639557 31639557 1 FALSE FALSE 31484702 2380880982 NA NA 2015-09-04T08:21:41.000 2016-01-13T01:10:47.470 2016-01-13T01:14:37.500 76 GSM1867010 SRR2242944.bw 18qE_2_USC_RNA_53 c("cell line: HCT116", "clone: 18qE Deletion Clone 2", "time point: RNA extracted on day D") SRP063339 SRS1055902 SRX1184004 SRR2242943 32180448 32180448 1 FALSE FALSE 32023940 2422228963 NA NA 2015-09-04T08:21:38.000 2016-01-13T01:10:46.347 2016-01-13T01:14:37.260 76 GSM1867009 SRR2242943.bw 18qE_1_USC_RNA_52 c("cell line: HCT116", "clone: 18qE Deletion Clone 1", "time point: RNA extracted on day D") SRP063339 SRS1055903 SRX1184003 SRR2242942 28886985 28886985 1 FALSE FALSE 28770751 2176690882 NA NA 2015-09-04T08:21:36.000 2016-01-13T01:10:44.687 2016-01-13T01:14:37.033 76 GSM1867008 SRR2242942.bw C2_USC_RNA_49 c("cell line: HCT116", "clone: Control Conle 2", "time point: RNA extracted on day D") SRP063339 SRS1055904 SRX1184002 SRR2242941 32065324 32065324 1 FALSE FALSE 31840257 2406300116 NA NA 2015-09-04T08:21:35.000 2016-01-13T01:10:42.947 2016-01-13T01:14:36.853 76 GSM1867007 SRR2242941.bw C1_USC_RNA_48 c("cell line: HCT116", "clone: Control Clone 1", "time point: RNA extracted on day D") SRP063339 SRS1055905 SRX1184001 SRR2242940 18646969 18646969 1 FALSE FALSE 18057476 1364744435 NA NA 2015-09-04T08:21:33.000 2016-01-13T01:10:41.307 2016-01-13T01:14:36.680 76 GSM1867006 SRR2242940.bw NE3_A_USC_RNA_72 c("cell line: HCT116", "clone: 18qNE Deletion Clone 3", "time point: RNA extracted on day A") SRP063339 SRS1055906 SRX1184000 SRR2242939 18931466 18931466 1 FALSE FALSE 18274315 1382019807 NA NA 2015-09-04T08:21:32.000 2016-01-13T01:13:52.190 2016-01-13T01:19:32.893 76 GSM1867005 SRR2242939.bw NE2_B_USC_RNA_70 c("cell line: HCT116", "clone: 18qNE Deletion Clone 2", "time point: RNA extracted on day B") SRP063339 SRS1055907 SRX1183999 SRR2242938 16134388 16134388 1 FALSE FALSE 15490206 1170874024 NA NA 2015-09-04T08:21:31.000 2016-01-13T01:13:51.253 2016-01-13T01:19:32.727 76 GSM1867004 SRR2242938.bw NE1_A_USC_RNA_68 c("cell line: HCT116", "clone: 18qNE Deletion Clone 1", "time point: RNA extracted on day A") SRP063339 SRS1055911 SRX1183995 SRR2242934 15046252 15046252 1 FALSE FALSE 14795748 1119245447 NA NA 2015-09-04T08:21:39.000 2016-01-13T01:13:50.477 2016-01-13T01:19:32.567 76 GSM1867000 SRR2242934.bw E7_C_USC_RNA_78 c("cell line: HCT116", "clone: E7 Deletion Clone", "time point: RNA extracted on day C") SRP063339 SRS1055912 SRX1183994 SRR2242933 19231230 19231230 1 FALSE FALSE 18903790 1429037591 NA NA 2015-09-04T08:21:28.000 2016-01-13T01:13:49.297 2016-01-13T01:19:32.410 76 GSM1866999 SRR2242933.bw E7_B_USC_RNA_77 c("cell line: HCT116", "clone: E7 Deletion Clone", "time point: RNA extracted on day B") SRP063339 SRS1055913 SRX1183993 SRR2242932 19802996 19802996 1 FALSE FALSE 19454182 1471478005 NA NA 2015-09-04T08:21:51.000 2016-01-13T01:13:48.427 2016-01-13T01:19:32.210 76 GSM1866998 SRR2242932.bw E7_A_USC_RNA_76 c("cell line: HCT116", "clone: E7 Deletion Clone", "time point: RNA extracted on day A") SRP063339 SRS1055914 SRX1183992 SRR2242931 17691238 17691238 1 FALSE FALSE 17075485 1291173945 NA NA 2015-09-04T08:20:06.000 2016-01-13T01:13:47.463 2016-01-13T01:19:32.057 76 GSM1866997 SRR2242931.bw C4_C_USC_RNA_67 c("cell line: HCT116", "clone: Control Clone 4", "time point: RNA extracted on day C") SRP063339 SRS1055915 SRX1183991 SRR2242930 16164721 16164721 1 FALSE FALSE 15656639 1183938886 NA NA 2015-09-04T08:21:27.000 2016-01-13T01:13:46.220 2016-01-13T01:19:31.900 76 GSM1866996 SRR2242930.bw C4_B_USC_RNA_66 c("cell line: HCT116", "clone: Control Clone 4", "time point: RNA extracted on day B") SRP063339 SRS1055916 SRX1183990 SRR2242929 16268213 16268213 1 FALSE FALSE 15626558 1179944948 NA NA 2015-09-04T08:21:26.000 2016-01-13T01:13:45.133 2016-01-13T01:19:31.747 76 GSM1866995 SRR2242929.bw C4_A_USC_RNA_65 c("cell line: HCT116", "clone: Control Clone 4", "time point: RNA extracted on day A") SRP063339 SRS1055917 SRX1183989 SRR2242928 15804917 15804917 1 FALSE FALSE 15550522 1174341998 NA NA 2015-09-04T08:21:25.000 2016-01-13T01:13:44.293 2016-01-13T01:19:31.590 76 GSM1866994 SRR2242928.bw C3_C_USC_RNA_64 c("cell line: HCT116", "clone: Control Cone 3", "time point: RNA extracted on day C") SRP063339 SRS1055918 SRX1183988 SRR2242927 16964742 16964742 1 FALSE FALSE 16336139 1234243046 NA NA 2015-09-04T08:21:24.000 2016-01-13T01:13:43.447 2016-01-13T01:19:31.440 76 GSM1866993 SRR2242927.bw C3_B_USC_RNA_63 c("cell line: HCT116", "clone: Control Cone 3", "time point: RNA extracted on day B") SRP063339 SRS1055919 SRX1183987 SRR2242926 18967070 18967070 1 FALSE FALSE 18203917 1376392241 NA NA 2015-09-04T08:21:23.000 2016-01-13T01:13:42.627 2016-01-13T01:19:31.297 76 GSM1866992 SRR2242926.bw C3_A_USC_RNA_62 c("cell line: HCT116", "clone: Control Cone 3", "time point: RNA extracted on day A") SRP063339 SRS1055920 SRX1183986 SRR2242925 19712747 19712747 1 FALSE FALSE 18849485 1423645067 NA NA 2015-09-04T08:21:22.000 2016-01-13T01:13:41.683 2016-01-13T01:19:31.143 76 GSM1866991 SRR2242925.bw C2_C_USC_RNA_61 c("cell line: HCT116", "clone: Control Clone 2", "time point: RNA extracted on day C") SRP063339 SRS1055921 SRX1183985 SRR2242924 18768237 18768237 1 FALSE FALSE 18171810 1373386313 NA NA 2015-09-04T08:21:21.000 2016-01-13T01:13:40.483 2016-01-13T01:19:30.760 76 GSM1866990 SRR2242924.bw C2_B_USC_RNA_60 c("cell line: HCT116", "clone: Control Clone 2", "time point: RNA extracted on day B") SRP063339 SRS1055922 SRX1183984 SRR2242923 19813413 19813413 1 FALSE FALSE 19185300 1450337453 NA NA 2015-09-04T08:21:20.000 2016-01-13T01:13:39.627 2016-01-13T01:19:30.063 76 GSM1866989 SRR2242923.bw C2_A_USC_RNA_59 c("cell line: HCT116", "clone: Control Clone 2", "time point: RNA extracted on day A") SRP063339 SRS1055923 SRX1183983 SRR2242922 16412591 16412591 1 FALSE FALSE 16133178 1217585029 NA NA 2015-09-04T08:21:18.000 2016-01-13T01:13:38.587 2016-01-13T01:19:29.683 76 GSM1866988 SRR2242922.bw C1_C_USC_RNA_58 c("cell line: HCT116", "clone: Control Clone 1", "time point: RNA extracted on day C") SRP063339 SRS1055924 SRX1183982 SRR2242921 17995545 17995545 1 FALSE FALSE 17724977 1340279209 NA NA 2015-09-04T08:21:17.000 2016-01-13T01:13:37.283 2016-01-13T01:19:29.327 76 GSM1866987 SRR2242921.bw C1_B_USC_RNA_57 c("cell line: HCT116", "clone: Control Clone 1", "time point: RNA extracted on day B") SRP063339 SRS1055925 SRX1183981 SRR2242920 18986523 18986523 1 FALSE FALSE 18558209 1402957565 NA NA 2015-09-04T08:21:16.000 2016-01-13T01:13:36.217 2016-01-13T01:19:28.907 76 GSM1866986 SRR2242920.bw C1_A_USC_RNA_56 c("cell line: HCT116", "clone: Control Clone 1", "time point: RNA extracted on day A")