project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP063500 SRS1061050 SRX1211780 SRR2316081 3625956 3625956 1 FALSE FALSE 3067980 257785921 NA NA 2015-09-09T10:01:35.000 2015-09-10T01:21:31.403 2015-09-10T01:27:31.110 93 GSM1873018 SRR2316081.bw Smooth.24.3 [mRNA] c("bacterial infection: M. abscessus Smooth (MAB-S)-infected", "time point (hours post-infection): 24") SRP063500 SRS1061051 SRX1211779 SRR2316080 10659874 10659874 1 FALSE FALSE 10608472 517747265 NA NA 2015-09-09T10:01:34.000 2015-09-10T01:21:30.157 2015-09-10T01:27:30.860 49 GSM1873017 SRR2316080.bw Smooth.24.2 [mRNA] c("bacterial infection: M. abscessus Smooth (MAB-S)-infected", "time point (hours post-infection): 24") SRP063500 SRS1061052 SRX1211778 SRR2316079 112422545 112422545 1 FALSE FALSE 112190312 5477298895 NA NA 2015-09-09T10:01:33.000 2015-09-10T01:21:28.977 2015-09-10T01:27:30.593 49 GSM1873016 SRR2316079.bw Smooth.24.1 [mRNA] c("bacterial infection: M. abscessus Smooth (MAB-S)-infected", "time point (hours post-infection): 24") SRP063500 SRS1061053 SRX1211777 SRR2316078 21654145 21654145 1 FALSE FALSE 21589340 1054744525 NA NA 2015-09-09T10:01:32.000 2015-09-10T01:21:27.573 2015-09-10T01:27:30.353 49 GSM1873015 SRR2316078.bw Smooth.4.3 [mRNA] c("bacterial infection: M. abscessus Smooth (MAB-S)-infected", "time point (hours post-infection): 4") SRP063500 SRS1061054 SRX1211776 SRR2316077 8551968 8551968 1 FALSE FALSE 8496798 432102951 NA NA 2015-09-09T10:01:30.000 2015-09-10T01:21:25.667 2015-09-10T01:27:29.903 51 GSM1873014 SRR2316077.bw Smooth.4.2 [mRNA] c("bacterial infection: M. abscessus Smooth (MAB-S)-infected", "time point (hours post-infection): 4") SRP063500 SRS1061056 SRX1211774 SRR2316075 23968525 23968525 1 FALSE FALSE 23870897 1165929809 NA NA 2015-09-09T10:01:27.000 2015-09-10T01:21:23.337 2015-09-10T01:27:29.063 49 GSM1873012 SRR2316075.bw Smooth.1.3 [mRNA] c("bacterial infection: M. abscessus Smooth (MAB-S)-infected", "time point (hours post-infection): 1") SRP063500 SRS1061057 SRX1211773 SRR2316074 13192355 13192355 1 FALSE FALSE 13117690 666920883 NA NA 2015-09-09T10:01:26.000 2015-09-10T01:21:21.523 2015-09-10T01:27:28.750 51 GSM1873011 SRR2316074.bw Smooth.1.2 [mRNA] c("bacterial infection: M. abscessus Smooth (MAB-S)-infected", "time point (hours post-infection): 1") SRP063500 SRS1061058 SRX1211772 SRR2316073 22412566 22412566 1 FALSE FALSE 22279259 1133500198 NA NA 2015-09-09T10:01:24.000 2015-09-10T01:21:20.593 2015-09-10T01:27:28.470 51 GSM1873010 SRR2316073.bw Smooth.1.1 [mRNA] c("bacterial infection: M. abscessus Smooth (MAB-S)-infected", "time point (hours post-infection): 1") SRP063500 SRS1061059 SRX1211771 SRR2316072 31170822 31170822 1 FALSE FALSE 26752191 1356800138 NA NA 2015-09-09T10:01:23.000 2015-09-10T01:21:19.357 2015-09-10T01:27:28.210 51 GSM1873009 SRR2316072.bw Rough.24.3 [mRNA] c("bacterial infection: M. abscessus Rough (MAB-R)-infected", "time point (hours post-infection): 24") SRP063500 SRS1061060 SRX1211770 SRR2316071 11672009 11672009 1 FALSE FALSE 11127590 563650816 NA NA 2015-09-09T10:01:22.000 2015-09-10T01:21:18.477 2015-09-10T01:27:27.887 51 GSM1873008 SRR2316071.bw Rough.24.2 [mRNA] c("bacterial infection: M. abscessus Rough (MAB-R)-infected", "time point (hours post-infection): 24") SRP063500 SRS1061061 SRX1211769 SRR2316070 27381974 27381974 1 FALSE FALSE 27318198 1389685038 NA NA 2015-09-09T10:01:21.000 2015-09-10T01:21:17.277 2015-09-10T01:27:27.430 51 GSM1873007 SRR2316070.bw Rough.24.1 [mRNA] c("bacterial infection: M. abscessus Rough (MAB-R)-infected", "time point (hours post-infection): 24") SRP063500 SRS1061062 SRX1211768 SRR2316069 26596675 26596675 1 FALSE FALSE 25061966 1271916432 NA NA 2015-09-09T10:01:19.000 2015-09-10T01:21:16.317 2015-09-10T01:27:27.080 51 GSM1873006 SRR2316069.bw Rough.4.3 [mRNA] c("bacterial infection: M. abscessus Rough (MAB-R)-infected", "time point (hours post-infection): 4") SRP063500 SRS1061063 SRX1211767 SRR2316068 10853733 10853733 1 FALSE FALSE 10795819 548777073 NA NA 2015-09-09T10:01:18.000 2015-09-10T01:21:15.347 2015-09-10T01:27:26.653 51 GSM1873005 SRR2316068.bw Rough.4.2 [mRNA] c("bacterial infection: M. abscessus Rough (MAB-R)-infected", "time point (hours post-infection): 4") SRP063500 SRS1061064 SRX1211766 SRR2316067 21508685 21508685 1 FALSE FALSE 21452317 1091345930 NA NA 2015-09-09T10:01:17.000 2015-09-10T01:21:14.300 2015-09-10T01:27:26.290 51 GSM1873004 SRR2316067.bw Rough.4.1 [mRNA] c("bacterial infection: M. abscessus Rough (MAB-R)-infected", "time point (hours post-infection): 4") SRP063500 SRS1061065 SRX1211765 SRR2316066 29406521 29406521 1 FALSE FALSE 28135025 1424135905 NA NA 2015-09-09T10:01:16.000 2015-09-10T01:21:13.207 2015-09-10T01:27:25.913 51 GSM1873003 SRR2316066.bw Rough.1.3 [mRNA] c("bacterial infection: M. abscessus Rough (MAB-R)-infected", "time point (hours post-infection): 1") SRP063500 SRS1061066 SRX1211764 SRR2316065 14698273 14698273 1 FALSE FALSE 14618166 743077397 NA NA 2015-09-09T10:01:15.000 2015-09-10T01:21:12.027 2015-09-10T01:27:25.373 51 GSM1873002 SRR2316065.bw Rough.1.2 [mRNA] c("bacterial infection: M. abscessus Rough (MAB-R)-infected", "time point (hours post-infection): 1") SRP063500 SRS1061067 SRX1211763 SRR2316064 16959006 16959006 1 FALSE FALSE 16881273 858575919 NA NA 2015-09-09T10:01:14.000 2015-09-10T01:21:10.757 2015-09-10T01:27:25.080 51 GSM1873001 SRR2316064.bw Rough.1.1 [mRNA] c("bacterial infection: M. abscessus Rough (MAB-R)-infected", "time point (hours post-infection): 1") SRP063500 SRS1061068 SRX1211762 SRR2316063 26319119 26319119 1 FALSE FALSE 25796055 1305414585 NA NA 2015-09-09T10:01:13.000 2015-09-10T01:21:09.563 2015-09-10T01:27:24.773 51 GSM1873000 SRR2316063.bw Mac.24.3 [mRNA] c("bacterial infection: Uninfected control", "time point (hours post-infection): 24") SRP063500 SRS1061069 SRX1211761 SRR2316062 8473600 8473600 1 FALSE FALSE 8436650 410137333 NA NA 2015-09-09T10:01:11.000 2015-09-10T01:21:08.343 2015-09-10T01:27:24.477 49 GSM1872999 SRR2316062.bw Mac.24.2 [mRNA] c("bacterial infection: Uninfected control", "time point (hours post-infection): 24") SRP063500 SRS1061070 SRX1211760 SRR2316061 13868287 13868287 1 FALSE FALSE 13838612 703538466 NA NA 2015-09-09T10:00:22.000 2015-09-10T01:21:07.067 2015-09-10T01:27:24.147 51 GSM1872998 SRR2316061.bw Mac.24.1 [mRNA] c("bacterial infection: Uninfected control", "time point (hours post-infection): 24") SRP063500 SRS1061071 SRX1211759 SRR2316060 32772702 32772702 1 FALSE FALSE 31188398 1576774980 NA NA 2015-09-09T10:00:21.000 2015-09-10T01:21:05.767 2015-09-10T01:27:23.833 51 GSM1872997 SRR2316060.bw Mac.4.3 [mRNA] c("bacterial infection: Uninfected control", "time point (hours post-infection): 4") SRP063500 SRS1061072 SRX1211758 SRR2316059 5643310 5643310 1 FALSE FALSE 5628945 286112978 NA NA 2015-09-09T10:00:20.000 2015-09-10T01:21:04.580 2015-09-10T01:27:23.510 51 GSM1872996 SRR2316059.bw Mac.4.2 [mRNA] c("bacterial infection: Uninfected control", "time point (hours post-infection): 4") SRP063500 SRS1061073 SRX1211757 SRR2316058 51567522 51567522 1 FALSE FALSE 51458788 2616100493 NA NA 2015-09-09T10:00:19.000 2015-09-10T01:21:03.383 2015-09-10T01:27:23.127 51 GSM1872995 SRR2316058.bw Mac.4.1 [mRNA] c("bacterial infection: Uninfected control", "time point (hours post-infection): 4") SRP063500 SRS1061074 SRX1211756 SRR2316057 21181584 21181584 1 FALSE FALSE 15552242 786826026 NA NA 2015-09-09T10:00:18.000 2015-09-10T01:21:02.350 2015-09-10T01:27:22.813 51 GSM1872994 SRR2316057.bw Mac.1.3 [mRNA] c("bacterial infection: Uninfected control", "time point (hours post-infection): 1") SRP063500 SRS1061075 SRX1211755 SRR2316056 5372307 5372307 1 FALSE FALSE 5352858 272257061 NA NA 2015-09-09T10:00:17.000 2015-09-10T01:21:01.413 2015-09-10T01:27:22.533 51 GSM1872993 SRR2316056.bw Mac.1.2 [mRNA] c("bacterial infection: Uninfected control", "time point (hours post-infection): 1") SRP063500 SRS1061076 SRX1211754 SRR2316055 29842789 29842789 1 FALSE FALSE 29457978 1497153862 NA NA 2015-09-09T10:00:15.000 2015-09-10T01:20:59.717 2015-09-10T01:27:22.260 51 GSM1872992 SRR2316055.bw Mac.1.1 [mRNA] c("bacterial infection: Uninfected control", "time point (hours post-infection): 1") SRP063500 SRS1061055 SRX1211775 SRR2316076 18939798 0 0 FALSE FALSE 0 NA NA NA 2015-09-09T10:01:28.000 2015-09-10T01:21:24.673 2015-09-10T01:27:29.403 51 GSM1873013 NA Smooth.4.1 [mRNA] c("bacterial infection: M. abscessus Smooth (MAB-S)-infected", "time point (hours post-infection): 4")