project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP064783 SRS1113642 SRX1334117 SRR2645007 19985023 19985023 1 FALSE FALSE 9636227 937055495 NA NA 2015-10-14T06:50:24.000 2015-11-19T01:18:21.027 2015-11-19T01:23:38.820 100 GSM1907126 SRR2645007.bw RNA-seq Asp5 knock-out infected 3 c("infection: Infected with Toxoplasma gondii", "strain, toxoplasma gondii: RHDku80", "genotype/variation: GRA16HA:DASP5") SRP064783 SRS1113643 SRX1334113 SRR2645003 27624510 27624510 1 FALSE FALSE 18466663 1821774919 NA NA 2015-10-14T06:50:31.000 2015-11-19T01:18:17.530 2015-11-19T01:23:38.540 100 GSM1907122 SRR2645003.bw RNA-seq wild type infected 2 c("infection: Infected with Toxoplasma gondii", "strain, toxoplasma gondii: RHDku80", "genotype/variation: GRA16HA") SRP064783 SRS1113644 SRX1334114 SRR2645004 26271780 26271780 1 FALSE FALSE 17665903 1737832294 NA NA 2015-10-14T06:50:32.000 2015-11-19T01:18:18.543 2015-11-19T01:23:38.313 100 GSM1907123 SRR2645004.bw RNA-seq wild type infected 3 c("infection: Infected with Toxoplasma gondii", "strain, toxoplasma gondii: RHDku80", "genotype/variation: GRA16HA") SRP064783 SRS1113645 SRX1334115 SRR2645005 25579458 25579458 1 FALSE FALSE 18800790 1850687832 NA NA 2015-10-14T06:50:34.000 2015-11-19T01:18:19.327 2015-11-19T01:23:38.093 100 GSM1907124 SRR2645005.bw RNA-seq Asp5 knock-out infected 1 c("infection: Infected with Toxoplasma gondii", "strain, toxoplasma gondii: RHDku80", "genotype/variation: GRA16HA:DASP5") SRP064783 SRS1113646 SRX1334116 SRR2645006 26642243 26642243 1 FALSE FALSE 13316348 1297666952 NA NA 2015-10-14T06:50:23.000 2015-11-19T01:18:20.210 2015-11-19T01:23:37.853 100 GSM1907125 SRR2645006.bw RNA-seq Asp5 knock-out infected 2 c("infection: Infected with Toxoplasma gondii", "strain, toxoplasma gondii: RHDku80", "genotype/variation: GRA16HA:DASP5") SRP064783 SRS1113647 SRX1334112 SRR2645002 25260392 25260392 1 FALSE FALSE 15775507 1552814689 NA NA 2015-10-14T06:50:29.000 2015-11-19T01:18:16.513 2015-11-19T01:23:37.587 100 GSM1907121 SRR2645002.bw RNA-seq wild type infected 1 c("infection: Infected with Toxoplasma gondii", "strain, toxoplasma gondii: RHDku80", "genotype/variation: GRA16HA") SRP064783 SRS1113648 SRX1334111 SRR2645001 24606785 24606785 1 FALSE FALSE 24548846 2438401549 NA NA 2015-10-14T06:50:28.000 2015-11-19T01:18:15.630 2015-11-19T01:23:37.373 100 GSM1907120 SRR2645001.bw RNA-seq uninfected 3 c("infection: Uninfected", "strain, toxoplasma gondii: NA", "genotype/variation: NA") SRP064783 SRS1113649 SRX1334110 SRR2645000 27581359 27581359 1 FALSE FALSE 27529569 2735480504 NA NA 2015-10-14T06:50:27.000 2015-11-19T01:18:14.640 2015-11-19T01:23:37.130 100 GSM1907119 SRR2645000.bw RNA-seq uninfected 2 c("infection: Uninfected", "strain, toxoplasma gondii: NA", "genotype/variation: NA") SRP064783 SRS1113650 SRX1334109 SRR2644999 26062325 26062325 1 FALSE FALSE 26015764 2584280208 NA NA 2015-10-14T06:50:26.000 2015-11-19T01:18:12.737 2015-11-19T01:23:36.870 100 GSM1907118 SRR2644999.bw RNA-seq uninfected 1 c("infection: Uninfected", "strain, toxoplasma gondii: NA", "genotype/variation: NA")