project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP066917 SRS1187057 SRX1459612 SRR2970383 27623432 27623432 1 FALSE FALSE 27622957 1792222534 NA NA 2015-12-02T15:41:09.000 2015-12-03T01:24:17.443 2015-12-03T01:50:56.310 65 GSM1960716 SRR2970383.bw BJ RASG12V + CRISPR sgRNA p21enhancer_Tiling_Hit147 c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: CRISPR sgRNA p21enhancer_Tiling_Hit147") SRP066917 SRS1187058 SRX1459611 SRR2970382 26239141 26239141 1 FALSE FALSE 26238691 1702384418 NA NA 2015-12-02T15:40:19.000 2015-12-03T01:25:31.473 2015-12-03T01:50:55.287 65 GSM1960715 SRR2970382.bw BJ RASG12V + CRISPR sgRNA p21enhancer_Tiling_Hit38 c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: CRISPR sgRNA p21enhancer_Tiling_Hit38") SRP066917 SRS1187059 SRX1459610 SRR2970381 26221693 26221693 1 FALSE FALSE 26221216 1701053010 NA NA 2015-12-02T15:40:18.000 2015-12-03T01:25:30.353 2015-12-03T01:50:52.340 65 GSM1960714 SRR2970381.bw BJ RASG12V + CRISPR sgRNA p21enhancer_Tiling_Hit4 c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: CRISPR sgRNA p21enhancer_Tiling_Hit4") SRP066917 SRS1187060 SRX1459609 SRR2970380 51859392 51859392 1 FALSE FALSE 51847782 2691167091 NA NA 2015-12-02T15:40:17.000 2015-12-03T01:25:29.283 2015-12-03T01:50:50.557 52 GSM1960713 SRR2970380.bw BJ RASG12V + CRISPR sgRNA for Enhancer3507_Hit3 c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: CRISPR sgRNA for Enhancer3507_Hit3") SRP066917 SRS1187061 SRX1459608 SRR2970379 51052301 51052301 1 FALSE FALSE 51041143 2648602488 NA NA 2015-12-02T15:40:17.000 2015-12-03T01:25:28.337 2015-12-03T01:50:48.183 52 GSM1960712 SRR2970379.bw BJ RASG12V + CRISPR sgRNA for Enhancer3507_Hit2 c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: CRISPR sgRNA for Enhancer3507_Hit2") SRP066917 SRS1187062 SRX1459607 SRR2970378 74613967 74613967 1 FALSE FALSE 74597684 3872097178 NA NA 2015-12-02T15:40:16.000 2015-12-03T01:25:26.997 2015-12-03T01:50:47.350 52 GSM1960711 SRR2970378.bw BJ RASG12V + CRISPR sgRNA for Enhancer3507_Hit1 c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: CRISPR sgRNA for Enhancer3507_Hit1") SRP066917 SRS1187064 SRX1459605 SRR2970376 29887612 29887612 1 FALSE FALSE 29887212 1939816446 NA NA 2015-12-02T15:40:14.000 2015-12-03T01:24:21.850 2015-12-03T01:50:44.690 65 GSM1960709 SRR2970376.bw BJ RASG12V + p53 targeting using shRNA c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: p53 silencing using shRNA") SRP066917 SRS1187065 SRX1459604 SRR2970375 18188658 18188658 1 FALSE FALSE 18186904 926171134 NA NA 2015-12-02T15:40:13.000 2015-12-03T01:24:20.880 2015-12-03T01:50:40.480 51 GSM1960708 SRR2970375.bw BJ RASG12V + p53 targeting using CRISPR c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: p53 targeting using CRISPR-Cas9") SRP066917 SRS1187066 SRX1459603 SRR2970374 19341143 19341143 1 FALSE FALSE 19338911 984713744 NA NA 2015-12-02T15:40:12.000 2015-12-03T01:24:19.943 2015-12-03T01:50:38.623 51 GSM1960707 SRR2970374.bw BJ RASG12V c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: None") SRP066917 SRS1187067 SRX1459602 SRR2970373 20752189 20752189 1 FALSE FALSE 20749895 1056530012 NA NA 2015-12-02T15:40:11.000 2015-12-03T01:24:18.927 2015-12-03T01:50:36.690 51 GSM1960706 SRR2970373.bw BJ control c("cell type: hTERT-immortalized BJ cells", "ras activation: No", "genetic manipulation: None") SRP066917 SRS1187063 SRX1459606 SRR2970377 72856759 0 0 FALSE FALSE 0 NA NA NA 2015-12-02T15:40:15.000 2015-12-03T01:24:22.837 2015-12-03T01:50:46.003 52 GSM1960710 NA BJ RASG12V + control CRISPR sgRNA c("cell type: hTERT-immortalized BJ cells", "ras activation: Yes", "genetic manipulation: control CRISPR-Cas9 sgRNA")