project	sample	experiment	run	read_count_as_reported_by_sra	reads_downloaded	proportion_of_reads_reported_by_sra_downloaded	paired_end	sra_misreported_paired_end	mapped_read_count	auc	sharq_beta_tissue	sharq_beta_cell_type	biosample_submission_date	biosample_publication_date	biosample_update_date	avg_read_length	geo_accession	bigwig_file	title	characteristics
SRP067214	SRS1199452	SRX1473538	SRR2984655	19471372	19471372	1	FALSE	FALSE	19317446	1265501153	NA	NA	2015-12-10T09:10:03.000	2015-12-21T01:13:17.873	2015-12-21T01:19:25.140	67	GSM1969206	SRR2984655.bw	KO	c("cell line: HAP1", "tissue source: epithelium", "genotype/variation: RNase L -/-", "sample description: RNase L-KO HAP1 cells, Ribo-Zero sequencing", "experiment group: EXPERIMENT 7")
SRP067214	SRS1199453	SRX1473537	SRR2984654	18923963	18923963	1	FALSE	FALSE	18722727	1213962721	NA	NA	2015-12-10T09:10:02.000	2015-12-21T01:13:16.870	2015-12-21T01:19:24.853	67	GSM1969205	SRR2984654.bw	WT	c("cell line: HAP1", "tissue source: epithelium", "genotype/variation: wild type", "sample description: HAP1 cells, Ribo-Zero sequencing", "experiment group: EXPERIMENT 7")
SRP067214	SRS1199454	SRX1473536	SRR2984653	10659048	10659048	1	FALSE	FALSE	10487221	674273834	NA	NA	2015-12-10T09:11:27.000	2015-12-21T01:13:15.877	2015-12-21T01:19:24.557	67	GSM1969204	SRR2984653.bw	Hap1KO-2naive	c("cell line: HAP1", "tissue source: epithelium", "genotype/variation: RNase L -/-", "sample description: RNase L-KO HAP1 cells, poly-A sequencing", "experiment group: EXPERIMENT 6")
SRP067214	SRS1199455	SRX1473535	SRR2984652	10085760	10085760	1	FALSE	FALSE	9991070	650214248	NA	NA	2015-12-10T09:11:26.000	2015-12-21T01:13:15.020	2015-12-21T01:19:24.273	67	GSM1969203	SRR2984652.bw	Hap1KO-1naive	c("cell line: HAP1", "tissue source: epithelium", "genotype/variation: RNase L -/-", "sample description: RNase L-KO HAP1 cells, poly-A sequencing", "experiment group: EXPERIMENT 6")
SRP067214	SRS1199456	SRX1473534	SRR2984651	9065533	9065533	1	FALSE	FALSE	8884905	562614857	NA	NA	2015-12-10T09:11:25.000	2015-12-21T01:13:13.880	2015-12-21T01:19:23.997	67	GSM1969202	SRR2984651.bw	Hap1WT-2naive	c("cell line: HAP1", "tissue source: epithelium", "genotype/variation: wild type", "sample description: HAP1 cells, poly-A sequencing", "experiment group: EXPERIMENT 6")
SRP067214	SRS1199457	SRX1473533	SRR2984650	12040737	12040737	1	FALSE	FALSE	11902437	775922496	NA	NA	2015-12-10T09:11:24.000	2015-12-21T01:12:30.870	2015-12-21T01:14:48.980	67	GSM1969201	SRR2984650.bw	Hap1WT-1naive	c("cell line: HAP1", "tissue source: epithelium", "genotype/variation: wild type", "sample description: HAP1 cells, poly-A sequencing", "experiment group: EXPERIMENT 6")
SRP067214	SRS1199458	SRX1473532	SRR2984649	15997556	15997556	1	FALSE	FALSE	15977565	1062138183	NA	NA	2015-12-10T09:11:24.000	2015-12-21T01:12:29.777	2015-12-21T01:14:48.740	67	GSM1969200	SRR2984649.bw	2-5A 9min	c("cell line: T47D", "tissue source: epithelium", "genotype/variation: wild type", "sample description: T47D cells semi-permeabilized with digitonin +2-5A for 9 minutes", "experiment group: EXPERIMENT 5")
SRP067214	SRS1199459	SRX1473531	SRR2984648	17341314	17341314	1	FALSE	FALSE	17323161	1150787938	NA	NA	2015-12-10T09:11:23.000	2015-12-21T01:12:28.723	2015-12-21T01:14:48.510	67	GSM1969199	SRR2984648.bw	2-5A 3min	c("cell line: T47D", "tissue source: epithelium", "genotype/variation: wild type", "sample description: T47D cells semi-permeabilized with digitonin +2-5A for 3 minutes", "experiment group: EXPERIMENT 5")
SRP067214	SRS1199460	SRX1473530	SRR2984647	16503287	16503287	1	FALSE	FALSE	16392569	1090870720	NA	NA	2015-12-10T09:11:22.000	2015-12-21T01:12:27.927	2015-12-21T01:14:46.113	67	GSM1969198	SRR2984647.bw	2-5A 1min	c("cell line: T47D", "tissue source: epithelium", "genotype/variation: wild type", "sample description: T47D cells semi-permeabilized with digitonin +2-5A for 1 minute", "experiment group: EXPERIMENT 5")
SRP067214	SRS1199461	SRX1473529	SRR2984646	20859626	20859626	1	FALSE	FALSE	20824975	1385214116	NA	NA	2015-12-10T09:11:21.000	2015-12-21T01:12:27.103	2015-12-21T01:14:45.837	67	GSM1969197	SRR2984646.bw	Control 9m	c("cell line: T47D", "tissue source: epithelium", "genotype/variation: wild type", "sample description: T47D cells semi-permeabilized with digitonin for 9 minutes", "experiment group: EXPERIMENT 5")
SRP067214	SRS1199462	SRX1473528	SRR2984645	18458436	18458436	1	FALSE	FALSE	18442997	1225811294	NA	NA	2015-12-10T09:11:20.000	2015-12-21T01:12:26.067	2015-12-21T01:14:45.573	67	GSM1969196	SRR2984645.bw	Control 3m	c("cell line: T47D", "tissue source: epithelium", "genotype/variation: wild type", "sample description: T47D cells semi-permeabilized with digitonin for 3 minutes", "experiment group: EXPERIMENT 5")
SRP067214	SRS1199463	SRX1473527	SRR2984644	18487729	18487729	1	FALSE	FALSE	18473261	1227944914	NA	NA	2015-12-10T09:11:19.000	2015-12-21T01:12:22.193	2015-12-21T01:14:45.280	67	GSM1969195	SRR2984644.bw	Control 1m	c("cell line: T47D", "tissue source: epithelium", "genotype/variation: wild type", "sample description: T47D cells semi-permeabilized with digitonin for 1 minute", "experiment group: EXPERIMENT 5")
SRP067214	SRS1199464	SRX1473526	SRR2984643	13595928	13595928	1	FALSE	FALSE	13552748	889110123	NA	NA	2015-12-10T09:11:18.000	2015-12-21T01:13:43.817	2015-12-21T01:19:23.733	67	GSM1969194	SRR2984643.bw	Scr-IC2	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 36h scrambled RNA control", "sample description: 36h scrambled RNA control followed by poly-IC treatment for 6h", "experiment group: EXPERIMENT 4")
SRP067214	SRS1199465	SRX1473525	SRR2984642	9760623	9760623	1	FALSE	FALSE	9726094	636809749	NA	NA	2015-12-10T09:11:17.000	2015-12-21T01:13:42.970	2015-12-21T01:19:23.490	67	GSM1969193	SRR2984642.bw	Scr-IC1	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 36h scrambled RNA control", "sample description: 36h scrambled RNA control followed by poly-IC treatment for 6h", "experiment group: EXPERIMENT 4")
SRP067214	SRS1199466	SRX1473524	SRR2984641	14313409	14313409	1	FALSE	FALSE	14247913	921070545	NA	NA	2015-12-10T09:11:16.000	2015-12-21T01:13:40.410	2015-12-21T01:19:21.020	67	GSM1969192	SRR2984641.bw	Scr2	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 36h scrambled RNA control", "sample description: 36h scrambled RNA control", "experiment group: EXPERIMENT 4")
SRP067214	SRS1199467	SRX1473523	SRR2984640	15557792	15557792	1	FALSE	FALSE	15489140	997582464	NA	NA	2015-12-10T09:11:16.000	2015-12-21T01:13:39.567	2015-12-21T01:19:20.740	67	GSM1969191	SRR2984640.bw	Scr1	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 36h scrambled RNA control", "sample description: 36h scrambled RNA control", "experiment group: EXPERIMENT 4")
SRP067214	SRS1199468	SRX1473522	SRR2984639	9985748	9985748	1	FALSE	FALSE	9956524	657727612	NA	NA	2015-12-10T09:11:15.000	2015-12-21T01:13:38.680	2015-12-21T01:19:20.460	67	GSM1969190	SRR2984639.bw	RNAi-IC2	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 36h RNAi for RNase L", "sample description: 36h RNAi for RNase L followed by poly-IC treatment for 6h", "experiment group: EXPERIMENT 4")
SRP067214	SRS1199469	SRX1473520	SRR2984637	15353688	15353688	1	FALSE	FALSE	15302366	998378379	NA	NA	2015-12-10T09:11:13.000	2015-12-21T01:13:37.100	2015-12-21T01:19:20.153	67	GSM1969188	SRR2984637.bw	RNAi-2	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 36h RNAi for RNase L", "sample description: 36h RNAi for RNase L", "experiment group: EXPERIMENT 4")
SRP067214	SRS1199470	SRX1473521	SRR2984638	12580829	12580829	1	FALSE	FALSE	12542143	822515687	NA	NA	2015-12-10T09:11:14.000	2015-12-21T01:13:37.877	2015-12-21T01:19:19.877	67	GSM1969189	SRR2984638.bw	RNAi-IC1	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 36h RNAi for RNase L", "sample description: 36h RNAi for RNase L followed by poly-IC treatment for 6h", "experiment group: EXPERIMENT 4")
SRP067214	SRS1199471	SRX1473519	SRR2984636	10392291	10392291	1	FALSE	FALSE	10300476	654880806	NA	NA	2015-12-10T09:11:12.000	2015-12-21T01:13:36.283	2015-12-21T01:19:19.603	67	GSM1969187	SRR2984636.bw	RNAi-1	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 36h RNAi for RNase L", "sample description: 36h RNAi for RNase L", "experiment group: EXPERIMENT 4")
SRP067214	SRS1199472	SRX1473517	SRR2984634	11575480	11575480	1	FALSE	FALSE	11534457	765883378	NA	NA	2015-12-10T09:11:10.000	2015-12-21T01:13:34.080	2015-12-21T01:19:19.363	67	GSM1969185	SRR2984634.bw	WT_overexpression_(rep 2)	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 24h Overexpression of WT human RNase L", "sample description: 24h Overexpression of WT human RNase L", "experiment group: EXPERIMENT 3")
SRP067214	SRS1199473	SRX1473516	SRR2984633	12879178	12879178	1	FALSE	FALSE	12802948	836327125	NA	NA	2015-12-10T09:11:09.000	2015-12-21T01:13:33.277	2015-12-21T01:19:19.117	67	GSM1969184	SRR2984633.bw	H672N_overexpression_(rep 1)	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 24h Overexpression of WT human RNase L", "sample description: 24h Overexpression of H672N RNase-inactive human RNase L", "experiment group: EXPERIMENT 3")
SRP067214	SRS1199474	SRX1473515	SRR2984632	11105682	11105682	1	FALSE	FALSE	10977687	724680048	NA	NA	2015-12-10T09:11:08.000	2015-12-21T01:13:32.420	2015-12-21T01:19:18.827	67	GSM1969183	SRR2984632.bw	WT_overexpression_(rep 1)	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 24h Overexpression of WT human RNase L", "sample description: 24h Overexpression of WT human RNase L", "experiment group: EXPERIMENT 3")
SRP067214	SRS1199475	SRX1473518	SRR2984635	14078762	14078762	1	FALSE	FALSE	14012354	930246617	NA	NA	2015-12-10T09:11:11.000	2015-12-21T01:13:35.133	2015-12-21T01:19:18.543	67	GSM1969186	SRR2984635.bw	H672_overexpression_(rep 2)	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: 24h Overexpression of WT human RNase L", "sample description: 24h Overexpression of H672N RNase-inactive human RNase L", "experiment group: EXPERIMENT 3")
SRP067214	SRS1199476	SRX1473514	SRR2984631	23215741	23215741	1	FALSE	FALSE	22942689	1449287815	NA	NA	2015-12-10T09:11:07.000	2015-12-21T01:13:31.567	2015-12-21T01:19:18.280	65	GSM1969182	SRR2984631.bw	Recomb-+RNL+2-5A_30sec	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: wild type", "sample description: HeLa S10 extract treated with recombinant human RNase L + 2-5A for 5 seconds", "experiment group: EXPERIMENT 2")
SRP067214	SRS1199477	SRX1473513	SRR2984630	13818304	13818304	1	FALSE	FALSE	13777604	908660428	NA	NA	2015-12-10T09:11:06.000	2015-12-21T01:13:28.530	2015-12-21T01:19:17.917	67	GSM1969181	SRR2984630.bw	Recomb-+RNL+2-5A_5sec	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: wild type", "sample description: HeLa S10 extract treated with recombinant human RNase L + 2-5A for 5 seconds", "experiment group: EXPERIMENT 2")
SRP067214	SRS1199478	SRX1473512	SRR2984629	27109850	27109850	1	FALSE	FALSE	26897892	1702896403	NA	NA	2015-12-10T09:11:05.000	2015-12-21T01:13:27.733	2015-12-21T01:19:17.677	65	GSM1969180	SRR2984629.bw	Recomb-Control	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: wild type", "sample description: Control HeLa RNA from S10 extracts", "experiment group: EXPERIMENT 2")
SRP067214	SRS1199479	SRX1473510	SRR2984627	22343968	22343968	1	FALSE	FALSE	22193319	1412585618	NA	NA	2015-12-10T09:11:03.000	2015-12-21T01:13:25.893	2015-12-21T01:19:17.410	65	GSM1969178	SRR2984627.bw	Control_1h	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: wild type", "sample description: Control HeLa RNA from S10 extracts exposed to room temperature for 1 hr", "experiment group: EXPERIMENT 1")
SRP067214	SRS1199480	SRX1473509	SRR2984626	10911457	10911457	1	FALSE	FALSE	10874766	721668076	NA	NA	2015-12-10T09:11:02.000	2015-12-21T01:13:25.020	2015-12-21T01:19:17.127	67	GSM1969177	SRR2984626.bw	Untreated_0m	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: wild type", "sample description: Control HeLa RNA from S10 extracts", "experiment group: EXPERIMENT 1")
SRP067214	SRS1199481	SRX1473511	SRR2984628	23528824	23528824	1	FALSE	FALSE	23378821	1481549097	NA	NA	2015-12-10T09:11:04.000	2015-12-21T01:13:26.740	2015-12-21T01:19:16.847	65	GSM1969179	SRR2984628.bw	2-5A_2h	c("cell line: HeLa", "tissue source: epithelium", "genotype/variation: wild type", "sample description: HeLa S10 extract treated with 2-5A for 1 hr", "experiment group: EXPERIMENT 1")