SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.5.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.6.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.4.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.0.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.5.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.7.0.sv.vcf'.
QC Warning- Expression quality metrics (e.g. 3-prime bias, high duplicate rate, genomic contamination, or low alignment rate) are well below average for this file, which should be used with caution, if at all, for expression analysis. However, other analyses, e.g. mutation and structural variant calling, may still give reliable result.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.6.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.1.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.5.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.0.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.6.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.7.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
RNA-seq:LOW 5/3 COVERAGE RATIO
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.7.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.0.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.7.0.sv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.8.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.1.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.10.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.6.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.6.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.4.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.4.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.9.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.8.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.0.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.2.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.9.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.6.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.9.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.5.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.10.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.5.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.4.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.6.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.7.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.1.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.4.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.5.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.7.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.8.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.4.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.10.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.2.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.9.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.4.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.7.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.6.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.7.0.sv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.7.0.sv.fa'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.10.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.5.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.7.0.sv.fa'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.4.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.6.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.3.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.7.0.sv.fa'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.8.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.6.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.0.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.3.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.5.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.8.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.6.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.4.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.11.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.13.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.10.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.4.0.indel.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.12.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.hg19.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.9.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.bcgsc.ca.1.1.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.6.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.exon.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.14.0 flagged aliquot to be excluded for analysis based on file 'bcgsc.ca.TCGA-13-0765-01A-01R-1564-13.hg19.bcgsc.ca.1.6.0.snv.vcf'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.5.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.spljxn.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.2.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.
SDRF in bcgsc.ca_OV.IlluminaHiSeq_RNASeq.mage-tab.1.3.0 flagged aliquot to be excluded for analysis based on file 'TCGA-13-0765-01A-01R-1564-13.gene.quantification.txt'.