project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP008218 SRS261038 SRX097124 SRR343343 5168834 5168834 1 FALSE FALSE 4772362 81130154 breast esc 2011-09-15T12:46:03.483 2013-06-13T07:44:02.537 2014-03-06T14:46:04.487 17 GSM793363 SRR343343.bw N33_Stroma_SAGEseq c("tissue: breast", "cell type: bead purified stromal cells", "parity: nulliparous") SRP008218 SRS261039 SRX097125 SRR343344 12586951 12586951 1 FALSE FALSE 12026615 204452455 breast esc 2011-09-15T12:46:03.500 2013-06-13T07:44:02.717 2014-03-06T14:46:04.540 17 GSM793364 SRR343344.bw N35_Stroma_SAGEseq c("tissue: breast", "cell type: bead purified stromal cells", "parity: nulliparous") SRP008218 SRS261040 SRX097126 SRR343345 11608362 11608362 1 FALSE FALSE 11203804 190464668 breast esc 2011-09-15T12:46:03.513 2013-06-13T07:44:02.783 2014-03-06T14:46:04.575 17 GSM793365 SRR343345.bw N58_Stroma_SAGEseq c("tissue: breast", "cell type: bead purified stromal cells", "parity: nulliparous") SRP008218 SRS261041 SRX097127 SRR343346 5996855 5996855 1 FALSE FALSE 5733154 97463618 breast esc 2011-09-15T12:46:03.530 2013-06-13T07:44:02.830 2014-03-06T14:46:04.613 17 GSM793366 SRR343346.bw N37_Stroma_SAGEseq c("tissue: breast", "cell type: bead purified stromal cells", "parity: parous") SRP008218 SRS261042 SRX097128 SRR343347 8821152 8821152 1 FALSE FALSE 8545439 145272463 breast esc 2011-09-15T12:46:03.547 2013-06-13T07:44:02.873 2014-03-06T14:46:04.643 17 GSM793367 SRR343347.bw N39_Stroma_SAGEseq c("tissue: breast", "cell type: bead purified stromal cells", "parity: parous") SRP008218 SRS261043 SRX097129 SRR343348 11168405 11168405 1 FALSE FALSE 10789043 183413731 breast esc 2011-09-15T12:46:03.563 2013-06-13T07:44:02.913 2014-03-06T14:46:04.672 17 GSM793368 SRR343348.bw N40_Stroma_SAGEseq c("tissue: breast", "cell type: bead purified stromal cells", "parity: parous") SRP008218 SRS261044 SRX097130 SRR343349 23580853 23580853 1 FALSE FALSE 21911309 372492253 breast esc 2011-09-15T12:46:03.580 2013-06-13T07:44:02.953 2014-03-06T14:46:04.706 17 GSM793369 SRR343349.bw N35_CD10+_SAGEseq c("tissue: breast", "cell type: bead purified CD10+ myoepithelial cells", "parity: nulliparous") SRP008218 SRS261045 SRX097131 SRR343350 23143298 23143298 1 FALSE FALSE 21795569 370524673 breast esc 2011-09-15T12:46:03.593 2013-06-13T07:44:02.993 2014-03-06T14:46:04.746 17 GSM793370 SRR343350.bw N48_CD10+_SAGEseq c("tissue: breast", "cell type: bead purified CD10+ myoepithelial cells", "parity: nulliparous") SRP008218 SRS261046 SRX097132 SRR343351 30193186 30193186 1 FALSE FALSE 26468376 449962392 breast esc 2011-09-15T12:46:03.610 2013-06-13T07:44:03.033 2014-03-06T14:46:04.777 17 GSM793371 SRR343351.bw N43_CD10+_SAGEseq c("tissue: breast", "cell type: bead purified CD10+ myoepithelial cells", "parity: nulliparous") SRP008218 SRS261047 SRX097133 SRR343352 20045828 20045828 1 FALSE FALSE 17693943 300797031 breast esc 2011-09-15T12:46:03.623 2013-06-13T07:44:03.080 2014-03-06T14:46:04.806 17 GSM793372 SRR343352.bw N39_CD10+_SAGEseq c("tissue: breast", "cell type: bead purified CD10+ myoepithelial cells", "parity: parous") SRP008218 SRS261048 SRX097134 SRR343353 16946456 16946456 1 FALSE FALSE 15440670 262491390 breast esc 2011-09-15T12:46:03.640 2013-06-13T07:44:03.120 2014-03-06T14:46:04.837 17 GSM793373 SRR343353.bw N40_CD10+_SAGEseq c("tissue: breast", "cell type: bead purified CD10+ myoepithelial cells", "parity: parous") SRP008218 SRS261049 SRX097135 SRR343354 30947629 30947629 1 FALSE FALSE 18895852 321229484 breast esc 2011-09-15T12:46:03.657 2013-06-13T07:44:03.177 2014-03-06T14:46:04.870 17 GSM793374 SRR343354.bw N123_CD10+_SAGEseq c("tissue: breast", "cell type: bead purified CD10+ myoepithelial cells", "parity: parous") SRP008218 SRS261050 SRX097136 SRR343355 11766031 11766031 1 FALSE FALSE 11229471 190901007 breast esc 2011-09-15T12:46:03.670 2013-06-13T07:44:03.213 2014-03-06T14:46:04.904 17 GSM793375 SRR343355.bw N43_CD24+_SAGEseq c("tissue: breast", "cell type: bead purified CD24+ epithelial cells", "parity: nulliparous") SRP008218 SRS261051 SRX097137 SRR343356 13156628 13156628 1 FALSE FALSE 12540514 213188738 breast esc 2011-09-15T12:46:03.687 2013-06-13T07:44:03.257 2014-03-06T14:46:04.937 17 GSM793376 SRR343356.bw N43_CD44+_SAGEseq c("tissue: breast", "cell type: bead purified CD44+ progenitor cells", "parity: nulliparous") SRP008218 SRS408158 SRX259974 SRR808400 113952094 113952094 1 FALSE FALSE 109978740 2351883944 breast esc 2013-04-04T14:05:26.210 2013-06-14T06:47:33.380 2014-03-06T17:07:43.103 50 GSM1115019 SRR808400.bw N_152_BRCA2_44_SAGEseq c("tissue: mammary gland", "cell type: cd44+ cells from BRCA2 mutation carrier") SRP008218 SRS408159 SRX259975 SRR808401 78089001 78089001 1 FALSE FALSE 67540837 1444600204 breast esc 2013-04-04T14:05:27.193 2013-06-14T06:47:33.497 2014-03-06T17:07:43.134 50 GSM1115020 SRR808401.bw N_161_BRCA2_44_SAGEseq c("tissue: mammary gland", "cell type: cd44+ cells from BRCA2 mutation carrier") SRP008218 SRS408160 SRX259976 SRR808402 58601284 58601284 1 FALSE FALSE 55600214 1196877389 breast esc 2013-04-04T14:05:27.233 2013-06-14T06:47:33.543 2014-03-06T17:07:43.165 50 GSM1115021 SRR808402.bw N_172_BRCA2_44_SAGEseq c("tissue: mammary gland", "cell type: cd44+ cells from BRCA2 mutation carrier") SRP008218 SRS408161 SRX259977 SRR808403 131059426 131059426 1 FALSE FALSE 119926723 2578940859 breast esc 2013-04-04T14:05:27.267 2013-06-14T06:47:33.620 2014-03-06T17:07:43.196 50 GSM1115022 SRR808403.bw P_CD44_BRCA1_N105_SAGEseq c("tissue: mammary gland", "cell type: cd44+ cells from BRCA1 mutation carrier") SRP008218 SRS408162 SRX259978 SRR808404 89814819 89814819 1 FALSE FALSE 78748488 1691994715 breast esc 2013-04-04T14:05:27.300 2013-06-14T06:47:33.807 2014-03-06T17:07:43.227 50 GSM1115023 SRR808404.bw P_CD44_BRCA1_N171_SAGEseq c("tissue: mammary gland", "cell type: cd44+ cells from BRCA1 mutation carrier") SRP008218 SRS408163 SRX259979 SRR808405 88285311 88285311 1 FALSE FALSE 71803782 1538259830 breast esc 2013-04-04T14:05:27.330 2013-06-14T06:47:33.577 2014-03-06T17:07:43.257 50 GSM1115024 SRR808405.bw P_CD44_BRCA1_N174_SAGEseq c("tissue: mammary gland", "cell type: cd44+ cells from BRCA1 mutation carrier")