project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP018218 SRS387512 SRX219901 SRR653011 28882963 28882963 1 FALSE FALSE 28766165 1172759526 NA NA 2013-01-25T13:05:03.340 2014-10-04T01:28:10.407 2014-10-04T01:32:58.297 41 GSM1070765 SRR653011.bw PSC from PDA patient [CA2] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from cancer patient") SRP018218 SRS387512 SRX219901 SRR653012 24935765 24935765 1 FALSE FALSE 23862930 933727632 NA NA 2013-01-25T13:05:03.340 2014-10-04T01:28:10.407 2014-10-04T01:32:58.297 41 GSM1070765 SRR653012.bw PSC from PDA patient [CA2] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from cancer patient") SRP018218 SRS387513 SRX219902 SRR653013 27231436 27231436 1 FALSE FALSE 27073004 1096821589 NA NA 2013-01-25T13:05:03.507 2014-10-04T01:28:18.117 2014-10-04T01:33:02.310 41 GSM1070766 SRR653013.bw PSC from PDA patient [CA3] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from cancer patient") SRP018218 SRS387513 SRX219902 SRR653014 26665591 26665591 1 FALSE FALSE 26194699 1049248572 NA NA 2013-01-25T13:05:03.507 2014-10-04T01:28:18.117 2014-10-04T01:33:02.310 41 GSM1070766 SRR653014.bw PSC from PDA patient [CA3] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from cancer patient") SRP018218 SRS387514 SRX219903 SRR653015 26482526 26482526 1 FALSE FALSE 23597415 913000113 NA NA 2013-01-25T13:05:03.537 2014-10-04T01:28:20.713 2014-10-04T01:33:02.657 41 GSM1070767 SRR653015.bw PSC from PDA patient [CA6] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from cancer patient") SRP018218 SRS387514 SRX219903 SRR653016 26951405 26951405 1 FALSE FALSE 26382366 1042938557 NA NA 2013-01-25T13:05:03.537 2014-10-04T01:28:20.713 2014-10-04T01:33:02.657 41 GSM1070767 SRR653016.bw PSC from PDA patient [CA6] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from cancer patient") SRP018218 SRS387515 SRX219904 SRR653017 28324684 28324684 1 FALSE FALSE 19318196 719678536 NA NA 2013-01-25T13:05:03.587 2014-10-04T01:28:29.533 2014-10-04T01:33:02.980 41 GSM1070768 SRR653017.bw PSC from PDA patient [CA7] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from cancer patient") SRP018218 SRS387515 SRX219904 SRR653018 28635856 28635856 1 FALSE FALSE 28181254 1114908097 NA NA 2013-01-25T13:05:03.587 2014-10-04T01:28:29.533 2014-10-04T01:33:02.980 41 GSM1070768 SRR653018.bw PSC from PDA patient [CA7] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from cancer patient") SRP018218 SRS387515 SRX219904 SRR653019 25963150 25963150 1 FALSE FALSE 25880403 1079949021 NA NA 2013-01-25T13:05:03.587 2014-10-04T01:28:29.533 2014-10-04T01:33:02.980 42 GSM1070768 SRR653019.bw PSC from PDA patient [CA7] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from cancer patient") SRP018218 SRS387516 SRX219905 SRR653020 24201934 24201934 1 FALSE FALSE 24019971 976825805 NA NA 2013-01-25T13:05:03.613 2014-10-04T01:28:38.667 2014-10-04T01:33:07.120 41 GSM1070769 SRR653020.bw PSC from non-cancer control [DI1] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from control patient") SRP018218 SRS387516 SRX219905 SRR653021 21038808 21038808 1 FALSE FALSE 20605652 828858642 NA NA 2013-01-25T13:05:03.613 2014-10-04T01:28:38.667 2014-10-04T01:33:07.120 41 GSM1070769 SRR653021.bw PSC from non-cancer control [DI1] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from control patient") SRP018218 SRS387517 SRX219906 SRR653022 28610022 28610022 1 FALSE FALSE 28493719 1158410653 NA NA 2013-01-25T13:05:03.700 2014-10-04T01:28:41.933 2014-10-04T01:33:08.230 41 GSM1070770 SRR653022.bw PSC from non-cancer control [DI2] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from control patient") SRP018218 SRS387517 SRX219906 SRR653023 28434259 28434259 1 FALSE FALSE 28103236 1134830462 NA NA 2013-01-25T13:05:03.700 2014-10-04T01:28:41.933 2014-10-04T01:33:08.230 41 GSM1070770 SRR653023.bw PSC from non-cancer control [DI2] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from control patient") SRP018218 SRS387518 SRX219907 SRR653024 28668963 28668963 1 FALSE FALSE 28553562 1161555846 NA NA 2013-01-25T13:05:03.723 2014-10-04T01:28:47.620 2014-10-04T01:33:08.783 41 GSM1070771 SRR653024.bw PSC from non-cancer control [DI3] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from control patient") SRP018218 SRS387518 SRX219907 SRR653025 26112000 26112000 1 FALSE FALSE 25409003 1005396033 NA NA 2013-01-25T13:05:03.723 2014-10-04T01:28:47.620 2014-10-04T01:33:08.783 41 GSM1070771 SRR653025.bw PSC from non-cancer control [DI3] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from control patient") SRP018218 SRS387519 SRX219908 SRR653026 27087599 27087599 1 FALSE FALSE 26959930 1095065869 NA NA 2013-01-25T13:05:03.760 2014-10-04T01:17:42.737 2014-10-04T01:21:05.550 41 GSM1070772 SRR653026.bw PSC from non-cancer control [DI4] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from control patient") SRP018218 SRS387519 SRX219908 SRR653027 23029566 23029566 1 FALSE FALSE 22181293 872618392 NA NA 2013-01-25T13:05:03.760 2014-10-04T01:17:42.737 2014-10-04T01:21:05.550 41 GSM1070772 SRR653027.bw PSC from non-cancer control [DI4] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from control patient") SRP018218 SRS387520 SRX219909 SRR653028 26336086 26336086 1 FALSE FALSE 26152360 1087144501 NA NA 2013-01-25T13:05:03.790 2014-10-04T01:17:49.370 2014-10-04T01:21:05.833 42 GSM1070773 SRR653028.bw PSC from non-cancer control [DI5] c("strain: C57Bl6/J", "cell type: human pancreatic stellate cells", "condition/treatment: primary PSCs from control patient") SRP018218 SRS387521 SRX219910 SRR653029 67103131 67103131 1 FALSE FALSE 65159724 3246877470 NA NA 2013-01-25T13:05:03.837 2014-10-04T01:18:04.470 2014-10-04T01:21:06.173 50 GSM1070774 SRR653029.bw MiaPaCa-2 cells treated with DMEM [Mia-DMEM] c("strain: C57Bl6/J", "cell type: human pancreatic adenocarcinoma cell line", "condition/treatment: DMEM") SRP018218 SRS387521 SRX219910 SRR653030 58429262 58429262 1 FALSE FALSE 57800022 2874632853 NA NA 2013-01-25T13:05:03.837 2014-10-04T01:18:04.470 2014-10-04T01:21:06.173 50 GSM1070774 SRR653030.bw MiaPaCa-2 cells treated with DMEM [Mia-DMEM] c("strain: C57Bl6/J", "cell type: human pancreatic adenocarcinoma cell line", "condition/treatment: DMEM") SRP018218 SRS387522 SRX219911 SRR653031 36774745 36774745 1 FALSE FALSE 36515379 1817338973 NA NA 2013-01-25T13:05:03.903 2014-10-04T01:36:18.120 2014-10-04T01:40:21.500 50 GSM1070775 SRR653031.bw MiaPaCa-2 cells treated with calcipotriol [Mia-CAL] c("strain: C57Bl6/J", "cell type: human pancreatic adenocarcinoma cell line", "condition/treatment: 100nM calcipotriol") SRP018218 SRS387522 SRX219911 SRR653032 40094842 40094842 1 FALSE FALSE 39839246 1986306842 NA NA 2013-01-25T13:05:03.903 2014-10-04T01:36:18.120 2014-10-04T01:40:21.500 50 GSM1070775 SRR653032.bw MiaPaCa-2 cells treated with calcipotriol [Mia-CAL] c("strain: C57Bl6/J", "cell type: human pancreatic adenocarcinoma cell line", "condition/treatment: 100nM calcipotriol") SRP018218 SRS387523 SRX219912 SRR653033 38134235 38134235 1 FALSE FALSE 37862244 1886727855 NA NA 2013-01-25T13:05:03.960 2014-10-04T01:36:27.347 2014-10-04T01:40:21.703 50 GSM1070776 SRR653033.bw MiaPaCa-2 cells treated with conditioned media [Mia-CM] c("strain: C57Bl6/J", "cell type: human pancreatic adenocarcinoma cell line", "condition/treatment: conditioned media from untreated cells") SRP018218 SRS387523 SRX219912 SRR653034 25598717 25598717 1 FALSE FALSE 25533695 1270725655 NA NA 2013-01-25T13:05:03.960 2014-10-04T01:36:27.347 2014-10-04T01:40:21.703 50 GSM1070776 SRR653034.bw MiaPaCa-2 cells treated with conditioned media [Mia-CM] c("strain: C57Bl6/J", "cell type: human pancreatic adenocarcinoma cell line", "condition/treatment: conditioned media from untreated cells") SRP018218 SRS387524 SRX219913 SRR653035 61768253 61768253 1 FALSE FALSE 61247273 3047940399 NA NA 2013-01-25T13:05:04.003 2014-10-04T01:25:51.587 2014-10-04T01:28:45.473 50 GSM1070777 SRR653035.bw MiaPaCa-2 cells treated with conditioned media [Mia-CMS] c("strain: C57Bl6/J", "cell type: human pancreatic adenocarcinoma cell line", "condition/treatment: conditioned media from calcipotriol-treated cells") SRP018218 SRS387524 SRX219913 SRR653036 34967354 34967354 1 FALSE FALSE 34771702 1731745419 NA NA 2013-01-25T13:05:04.003 2014-10-04T01:25:51.587 2014-10-04T01:28:45.473 50 GSM1070777 SRR653036.bw MiaPaCa-2 cells treated with conditioned media [Mia-CMS] c("strain: C57Bl6/J", "cell type: human pancreatic adenocarcinoma cell line", "condition/treatment: conditioned media from calcipotriol-treated cells")