project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP031858 SRS493215 SRX367092 SRR1015680 27018735 27018735 1 FALSE FALSE 26707085 899417641 stem cell h1 2013-10-23T13:50:11.607 2013-10-25T01:16:49.733 2014-03-07T16:07:17.318 34 GSM1249119 SRR1015680.bw H1 c("cell type: H1", "passage: 40", "mutation: no", "treatment: no") SRP031858 SRS493216 SRX367093 SRR1015681 23206873 23206873 1 FALSE FALSE 22823917 764179602 stem cell esc 2013-10-23T13:50:33.150 2013-10-25T01:16:59.480 2014-03-07T16:07:18.004 34 GSM1249120 SRR1015681.bw H7 c("cell type: H7", "passage: 53", "mutation: no", "treatment: no") SRP031858 SRS493217 SRX367094 SRR1015682 27541661 27541661 1 FALSE FALSE 27373263 927913828 stem cell h9 2013-10-23T13:50:17.080 2013-10-25T01:16:57.123 2014-03-07T16:07:17.438 34 GSM1249121 SRR1015682.bw H9 c("cell type: H9", "passage: 48", "mutation: no", "treatment: no") SRP031858 SRS493218 SRX367095 SRR1015683 29591662 29591662 1 FALSE FALSE 28796232 972519836 stem cell ips 2013-10-23T13:50:13.510 2013-10-25T01:17:10.133 2014-03-07T16:07:17.359 34 GSM1249122 SRR1015683.bw PGP1-iPSCs c("cell type: PGP1", "passage: 34", "mutation: no", "treatment: no") SRP031858 SRS493219 SRX367096 SRR1015684 27870741 27870741 1 FALSE FALSE 27445473 923690844 stem cell ips 2013-10-23T13:50:36.943 2013-10-25T01:17:15.220 2014-03-07T16:07:18.114 34 GSM1249123 SRR1015684.bw PGP9-iPSCs c("cell type: PGP9", "passage: 12", "mutation: no", "treatment: no") SRP031858 SRS493220 SRX367097 SRR1015685 24920217 24920217 1 FALSE FALSE 24723809 834775751 stem cell ips 2013-10-23T13:50:15.637 2013-10-25T01:17:17.880 2014-03-07T16:07:17.400 34 GSM1249124 SRR1015685.bw Detroit551-iPSCs c("cell type: Detroit551", "passage: 5", "mutation: no", "treatment: no") SRP031858 SRS493221 SRX367098 SRR1015686 23804032 23804032 1 FALSE FALSE 23566510 796072611 stem cell ips 2013-10-23T13:50:18.393 2013-10-25T01:17:19.567 2014-03-07T16:07:17.480 34 GSM1249125 SRR1015686.bw RTT1-iPS-13w c("cell type: RTT1 fibroblast", "passage: 9", "mutation: T158M", "treatment: no") SRP031858 SRS493222 SRX367099 SRR1015687 62386511 62386511 1 FALSE FALSE 57767393 2871833472 stem cell ips 2013-10-23T13:50:40.890 2013-10-25T01:16:52.470 2014-03-07T16:07:18.362 50 GSM1249126 SRR1015687.bw RTT5-iPS-31w c("cell type: RTT5 fibroblast", "passage: 5", "mutation: X487W", "treatment: no") SRP031858 SRS493223 SRX367100 SRR1015688 27429939 27429939 1 FALSE FALSE 27254469 923552820 stem cell ips 2013-10-23T13:50:26.143 2013-10-25T01:17:21.040 2014-03-07T16:07:17.800 34 GSM1249127 SRR1015688.bw RTT4-iPS-24w c("cell type: RTT4 fibroblast", "passage: 8", "mutation: R306C", "treatment: no") SRP031858 SRS493224 SRX367101 SRR1015689 30729478 30729478 1 FALSE FALSE 30585935 1097801021 stem cell ips 2013-10-23T13:50:24.807 2013-10-25T01:16:55.570 2014-03-07T16:07:17.738 36 GSM1249128 SRR1015689.bw RTT5-iPS-42m c("cell type: RTT5 fibroblast", "passage: 11", "mutation: X487W", "treatment: no") SRP031858 SRS493225 SRX367102 SRR1015690 86166014 86166014 1 FALSE FALSE 85716283 4264355846 stem cell ips 2013-10-23T13:50:31.667 2013-10-25T01:17:02.123 2014-03-07T16:07:17.968 50 GSM1249129 SRR1015690.bw RTT3-iPS-16m c("cell type: RTT3 fibroblast", "passage: 8", "mutation: E235fs", "treatment: no") SRP031858 SRS493226 SRX367103 SRR1015691 103338210 103338210 1 FALSE FALSE 102115001 5078658351 stem cell ips 2013-10-23T13:50:27.717 2013-10-25T01:17:27.557 2014-03-07T16:07:17.845 50 GSM1249130 SRR1015691.bw RTT4-iPS-16m c("cell type: RTT4 fibroblast", "passage: 5", "mutation: R306C", "treatment: no") SRP031858 SRS493227 SRX367104 SRR1015692 24429751 24429751 1 FALSE FALSE 24262031 819736801 stem cell ips 2013-10-23T13:50:21.137 2013-10-25T01:17:04.050 2014-03-07T16:07:17.558 34 GSM1249131 SRR1015692.bw RTT5-iPS-34m c("cell type: RTT5 fibroblast", "passage: 4", "mutation: X487W", "treatment: no") SRP031858 SRS493228 SRX367105 SRR1015693 29507505 29507505 1 FALSE FALSE 29308953 990759904 stem cell ips 2013-10-23T13:50:35.760 2013-10-25T01:17:11.400 2014-03-07T16:07:18.077 34 GSM1249132 SRR1015693.bw RTT3-iPS-46bi c("cell type: RTT3 fibroblast", "passage: 8", "mutation: E235fs", "treatment: no") SRP031858 SRS493229 SRX367106 SRR1015694 23468604 23468604 1 FALSE FALSE 23167270 783991896 stem cell ips 2013-10-23T13:50:23.627 2013-10-25T01:17:25.863 2014-03-07T16:07:17.647 34 GSM1249133 SRR1015694.bw RTT4-iPS-19bi c("cell type: RTT4 fibroblast", "passage: 15", "mutation: R306C", "treatment: no") SRP031858 SRS493230 SRX367107 SRR1015695 24528796 24528796 1 FALSE FALSE 24344771 821966757 stem cell ips 2013-10-23T13:50:22.307 2013-10-25T01:17:29.363 2014-03-07T16:07:17.612 34 GSM1249134 SRR1015695.bw RTT2-iPS-32bi c("cell type: RTT2 fibroblast", "passage: 9", "mutation: Q244X", "treatment: no") SRP031858 SRS493231 SRX367108 SRR1015696 98343780 98343780 1 FALSE FALSE 97759138 4863844776 stem cell ips 2013-10-23T13:50:34.510 2013-10-25T01:17:32.170 2014-03-07T16:07:18.041 50 GSM1249135 SRR1015696.bw RTT1-iPS-10bi c("cell type: RTT1 fibroblast", "passage: 7", "mutation: T158M", "treatment: no") SRP031858 SRS493232 SRX367109 SRR1015697 81725433 81725433 1 FALSE FALSE 78028456 3884137598 stem cell ips 2013-10-23T13:50:28.980 2013-10-25T01:17:35.967 2014-03-07T16:07:17.884 50 GSM1249136 SRR1015697.bw RTT5-iPS-15bi c("cell type: RTT5 fibroblast", "passage: 4", "mutation: X487W", "treatment: no") SRP031858 SRS493233 SRX367110 SRR1015698 84745610 84745610 1 FALSE FALSE 83482159 4150289723 stem cell ips 2013-10-23T13:50:19.917 2013-10-25T01:17:37.870 2014-03-07T16:07:17.517 50 GSM1249137 SRR1015698.bw RTT5-iPS-43bi c("cell type: RTT5 fibroblast", "passage: 16", "mutation: X487W", "treatment: no") SRP031858 SRS493234 SRX367111 SRR1015699 29561918 29561918 1 FALSE FALSE 29044329 1441594066 stem cell ips 2013-10-23T13:50:38.373 2013-10-25T01:17:40.123 2014-03-07T16:07:18.166 50 GSM1249138 SRR1015699.bw Detroit551-shMeCP2-iPSCs c("cell type: Detroit551", "passage: 17", "mutation: no", "treatment: shMeCP2")