project sample experiment run read_count_as_reported_by_sra reads_downloaded proportion_of_reads_reported_by_sra_downloaded paired_end sra_misreported_paired_end mapped_read_count auc sharq_beta_tissue sharq_beta_cell_type biosample_submission_date biosample_publication_date biosample_update_date avg_read_length geo_accession bigwig_file title characteristics SRP044917 SRS668042 SRX663170 SRR1528543 74023358 74023358 1 FALSE FALSE 73959756 7348749277 NA NA 2014-07-28T11:31:17.490 2014-08-15T04:01:11.363 2014-08-15T04:06:20.210 100 GSM1446778 SRR1528543.bw CUTLL_Control_2 c("cell line: CUTLL1", "cell type: T-ALL cell line containing a t(7;9) rearrangement and aberrant NOTCH1 activation", "passage: <20", "treatment: vehicle") SRP044917 SRS668043 SRX663171 SRR1528544 48327773 48327773 1 FALSE FALSE 48259575 4786189949 NA NA 2014-07-28T11:31:19.723 2014-08-15T04:01:26.750 2014-08-15T04:06:20.500 100 GSM1446779 SRR1528544.bw CUTLL_Control_3 c("cell line: CUTLL1", "cell type: T-ALL cell line containing a t(7;9) rearrangement and aberrant NOTCH1 activation", "passage: <20", "treatment: vehicle") SRP044917 SRS668044 SRX663172 SRR1528545 58804571 58804571 1 FALSE FALSE 58720824 5832820022 NA NA 2014-07-28T11:31:21.957 2014-08-15T04:01:46.550 2014-08-15T04:06:20.837 100 GSM1446780 SRR1528545.bw CUTLL_GSI_1 c("cell line: CUTLL1", "cell type: T-ALL cell line containing a t(7;9) rearrangement and aberrant NOTCH1 activation", "passage: <20", "treatment: GSI 72 hrs") SRP044917 SRS668045 SRX663174 SRR1528547 36158296 36158296 1 FALSE FALSE 36058465 3574489095 NA NA 2014-07-28T11:31:26.247 2014-08-15T04:02:35.190 2014-08-15T04:06:21.140 100 GSM1446782 SRR1528547.bw CUTLL_GSI_3 c("cell line: CUTLL1", "cell type: T-ALL cell line containing a t(7;9) rearrangement and aberrant NOTCH1 activation", "passage: <20", "treatment: GSI 72 hrs") SRP044917 SRS668046 SRX663173 SRR1528546 83767955 83767955 1 FALSE FALSE 83668888 8273936910 NA NA 2014-07-28T11:31:24.077 2014-08-15T04:02:04.497 2014-08-15T04:06:21.470 100 GSM1446781 SRR1528546.bw CUTLL_GSI_2 c("cell line: CUTLL1", "cell type: T-ALL cell line containing a t(7;9) rearrangement and aberrant NOTCH1 activation", "passage: <20", "treatment: GSI 72 hrs") SRP044917 SRS668047 SRX663169 SRR1528542 72482843 72482843 1 FALSE FALSE 72420596 7190810009 NA NA 2014-07-28T11:31:07.023 2014-08-15T04:00:33.560 2014-08-15T04:06:21.777 100 GSM1446777 SRR1528542.bw CUTLL_Control_1 c("cell line: CUTLL1", "cell type: T-ALL cell line containing a t(7;9) rearrangement and aberrant NOTCH1 activation", "passage: <20", "treatment: vehicle") SRP044917 SRS668048 SRX663175 SRR1528548 61763313 61763313 1 FALSE FALSE 61678195 6122423525 NA NA 2014-07-28T11:31:28.413 2014-08-15T04:03:04.277 2014-08-15T04:06:22.120 100 GSM1446783 SRR1528548.bw CUTLL_Washout_1 c("cell line: CUTLL1", "cell type: T-ALL cell line containing a t(7;9) rearrangement and aberrant NOTCH1 activation", "passage: <20", "treatment: GSI 72 hrs, wash out 4 hrs") SRP044917 SRS668049 SRX663176 SRR1528549 72612267 72612267 1 FALSE FALSE 72536413 7170356084 NA NA 2014-07-28T11:31:47.987 2014-08-15T04:03:09.303 2014-08-15T04:06:22.520 100 GSM1446784 SRR1528549.bw CUTLL_Washout_2 c("cell line: CUTLL1", "cell type: T-ALL cell line containing a t(7;9) rearrangement and aberrant NOTCH1 activation", "passage: <20", "treatment: GSI 72 hrs, wash out 4 hrs") SRP044917 SRS668050 SRX663177 SRR1528550 41936593 41936593 1 FALSE FALSE 41855496 4148930065 NA NA 2014-07-28T11:31:50.170 2014-08-15T04:34:23.373 2014-08-15T05:45:15.620 100 GSM1446785 SRR1528550.bw CUTLL_Washout_3 c("cell line: CUTLL1", "cell type: T-ALL cell line containing a t(7;9) rearrangement and aberrant NOTCH1 activation", "passage: <20", "treatment: GSI 72 hrs, wash out 4 hrs") SRP044917 SRS668051 SRX663179 SRR1528552 33966209 33966209 1 FALSE FALSE 33813005 3356313776 NA NA 2014-07-28T11:31:55.610 2014-08-15T04:34:52.180 2014-08-15T05:45:16.117 100 GSM1446787 SRR1528552.bw HCC1599_GSI_1 c("cell line: HCC1599", "cell type: Triple negative breast cancer cell line containing an activating Notch1 mutation, grown in suspension", "passage: --", "treatment: GSI 72 hrs") SRP044917 SRS668052 SRX663180 SRR1528553 36381231 36381231 1 FALSE FALSE 36292367 3603793853 NA NA 2014-07-28T11:31:57.787 2014-08-15T04:35:07.427 2014-08-15T05:45:16.567 100 GSM1446788 SRR1528553.bw HCC1599_Washout_1 c("cell line: HCC1599", "cell type: Triple negative breast cancer cell line containing an activating Notch1 mutation, grown in suspension", "passage: --", "treatment: GSI 72 hrs, wash out 4 hrs") SRP044917 SRS668053 SRX663182 SRR1528555 36212801 36212801 1 FALSE FALSE 36160940 3632392394 NA NA 2014-07-28T11:32:02.150 2014-08-15T04:35:36.613 2014-08-15T05:52:15.673 101 GSM1446790 SRR1528555.bw HCC1599_GSI_2 c("cell line: HCC1599", "cell type: Triple negative breast cancer cell line containing an activating Notch1 mutation, grown in suspension", "passage: --", "treatment: GSI 72 hrs") SRP044917 SRS668054 SRX663181 SRR1528554 33188356 33188356 1 FALSE FALSE 33149192 3326102914 NA NA 2014-07-28T11:31:59.943 2014-08-15T04:35:23.517 2014-08-15T05:52:16.010 101 GSM1446789 SRR1528554.bw HCC1599_Control_2 c("cell line: HCC1599", "cell type: Triple negative breast cancer cell line containing an activating Notch1 mutation, grown in suspension", "passage: --", "treatment: vehicle") SRP044917 SRS668055 SRX663178 SRR1528551 32741924 32741924 1 FALSE FALSE 32687826 3247521896 NA NA 2014-07-28T11:31:53.407 2014-08-15T04:34:35.310 2014-08-15T05:45:16.987 100 GSM1446786 SRR1528551.bw HCC1599_Control_1 c("cell line: HCC1599", "cell type: Triple negative breast cancer cell line containing an activating Notch1 mutation, grown in suspension", "passage: --", "treatment: vehicle") SRP044917 SRS668056 SRX663183 SRR1528556 35671951 35671951 1 FALSE FALSE 35628647 3576632044 NA NA 2014-07-28T11:32:04.487 2014-08-15T04:35:48.550 2014-08-15T05:52:19.310 101 GSM1446791 SRR1528556.bw HCC1599_Washout_2 c("cell line: HCC1599", "cell type: Triple negative breast cancer cell line containing an activating Notch1 mutation, grown in suspension", "passage: --", "treatment: GSI 72 hrs, wash out 4 hrs") SRP044917 SRS668057 SRX663184 SRR1528557 35709269 35709269 1 FALSE FALSE 35659045 3579537112 NA NA 2014-07-28T11:32:06.840 2014-08-15T04:36:01.297 2014-08-15T05:52:19.707 101 GSM1446792 SRR1528557.bw HCC1599_Control_3 c("cell line: HCC1599", "cell type: Triple negative breast cancer cell line containing an activating Notch1 mutation, grown in suspension", "passage: --", "treatment: vehicle") SRP044917 SRS668058 SRX663185 SRR1528558 28467017 28467017 1 FALSE FALSE 28385066 2847779651 NA NA 2014-07-28T11:32:08.940 2014-08-15T04:36:16.647 2014-08-15T05:52:20.150 101 GSM1446793 SRR1528558.bw HCC1599_GSI_3 c("cell line: HCC1599", "cell type: Triple negative breast cancer cell line containing an activating Notch1 mutation, grown in suspension", "passage: --", "treatment: GSI 72 hrs") SRP044917 SRS668059 SRX663186 SRR1528559 31858378 31858378 1 FALSE FALSE 31785017 3186607004 NA NA 2014-07-28T11:32:11.110 2014-08-15T04:41:32.833 2014-08-15T06:11:15.467 101 GSM1446794 SRR1528559.bw HCC1599_Washout_3 c("cell line: HCC1599", "cell type: Triple negative breast cancer cell line containing an activating Notch1 mutation, grown in suspension", "passage: --", "treatment: GSI 72 hrs, wash out 4 hrs") SRP044917 SRS668060 SRX663187 SRR1528560 29849662 29849662 1 FALSE FALSE 29797988 2958080556 NA NA 2014-07-28T11:32:13.940 2014-08-15T04:41:53.263 2014-08-15T06:17:14.680 100 GSM1446795 SRR1528560.bw REC1_Control_1 c("cell line: REC1", "cell type: Mantle cell lymphoma cell line containing an activating Notch1 mutation", "passage: --", "treatment: vehicle") SRP044917 SRS668061 SRX663188 SRR1528561 31909220 31909220 1 FALSE FALSE 31720381 3148825279 NA NA 2014-07-28T11:32:25.310 2014-08-15T04:42:18.160 2014-08-15T06:17:15.020 100 GSM1446796 SRR1528561.bw REC1_GSI_1 c("cell line: REC1", "cell type: Mantle cell lymphoma cell line containing an activating Notch1 mutation", "passage: --", "treatment: GSI 72 hrs") SRP044917 SRS668062 SRX663189 SRR1528562 32060254 32060254 1 FALSE FALSE 31979356 3174964249 NA NA 2014-07-28T11:32:27.560 2014-08-15T03:52:00.100 2014-08-15T03:53:13.920 100 GSM1446797 SRR1528562.bw REC1_Washout_1 c("cell line: REC1", "cell type: Mantle cell lymphoma cell line containing an activating Notch1 mutation", "passage: --", "treatment: GSI 72 hrs, wash out 4 hrs") SRP044917 SRS668063 SRX663190 SRR1528563 22393763 22393763 1 FALSE FALSE 22356604 2221940095 NA NA 2014-07-28T11:32:29.983 2014-08-15T03:52:14.380 2014-08-15T03:58:15.080 100 GSM1446798 SRR1528563.bw REC1_Control_2 c("cell line: REC1", "cell type: Mantle cell lymphoma cell line containing an activating Notch1 mutation", "passage: --", "treatment: vehicle") SRP044917 SRS668064 SRX663191 SRR1528564 35443274 35443274 1 FALSE FALSE 35065178 3473978744 NA NA 2014-07-28T11:32:32.257 2014-08-15T03:52:31.307 2014-08-15T03:58:15.367 100 GSM1446799 SRR1528564.bw REC1_GSI_2 c("cell line: REC1", "cell type: Mantle cell lymphoma cell line containing an activating Notch1 mutation", "passage: --", "treatment: GSI 72 hrs") SRP044917 SRS668065 SRX663192 SRR1528565 29262474 29262474 1 FALSE FALSE 29172017 2894645789 NA NA 2014-07-28T11:32:34.530 2014-08-15T03:52:45.113 2014-08-15T03:58:15.653 100 GSM1446800 SRR1528565.bw REC1_Washout_2 c("cell line: REC1", "cell type: Mantle cell lymphoma cell line containing an activating Notch1 mutation", "passage: --", "treatment: GSI 72 hrs, wash out 4 hrs") SRP044917 SRS668066 SRX663193 SRR1528566 43353445 43353445 1 FALSE FALSE 43302403 4305605583 NA NA 2014-07-28T11:32:36.863 2014-08-15T03:53:06.960 2014-08-15T03:58:15.910 100 GSM1446801 SRR1528566.bw REC1_Control_3 c("cell line: REC1", "cell type: Mantle cell lymphoma cell line containing an activating Notch1 mutation", "passage: --", "treatment: vehicle") SRP044917 SRS668067 SRX663195 SRR1528568 38528587 38528587 1 FALSE FALSE 38472316 3823519950 NA NA 2014-07-28T11:32:41.280 2014-08-15T03:53:48.930 2014-08-15T03:58:16.247 100 GSM1446803 SRR1528568.bw REC1_Washout_3 c("cell line: REC1", "cell type: Mantle cell lymphoma cell line containing an activating Notch1 mutation", "passage: --", "treatment: GSI 72 hrs, wash out 4 hrs") SRP044917 SRS668068 SRX663194 SRR1528567 28341989 28341989 1 FALSE FALSE 28289875 2810637751 NA NA 2014-07-28T11:32:39.110 2014-08-15T03:53:26.500 2014-08-15T03:58:16.537 100 GSM1446802 SRR1528567.bw REC1_GSI_3 c("cell line: REC1", "cell type: Mantle cell lymphoma cell line containing an activating Notch1 mutation", "passage: --", "treatment: GSI 72 hrs")